Parsing BlastProtein results failed: HTTP Error 415: Unsupported Media Type

[matthias.vorlaender@…]

The following bug report has been submitted:
Platform:        macOS-26.2-arm64-arm-64bit
ChimeraX Version: 1.11.1 (2026-01-23 05:51:34 UTC)
Description
Blast not working

Blast reports an error:
Parsing BlastProtein results failed: HTTP Error 415: Unsupported Media Type

Log:
Could not find tool "CliX"  

> buttonpanel Shortcuts add previous_model command prevmodel

> buttonpanel Shortcuts add next_model command nextmodel

> alias analyse_af_screen_hit runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/analyse_af2_screen_hit.cxc $1 $2

> alias analyse_af3 runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/analyse_af3_prediction.cxc $1 $2

> alias des_ex runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/select_by_exact_match.cxc $1

> alias des runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/select_by_description_match.cxc $1

> alias des_m runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/select_model_by_description_match.cxc $1 $2

> alias analyse_af3_model runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/analyse_af3_prediction_1_model.cxc $1 $2 $3

> alias pol_pdbs cd /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/nascent_PolII_onedrive/pol_II_pdbs

> alias analyse_auto-AF runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/analyse_auto-alphafold_prediction.cxc $1 $2

> alias af_hit runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/analyse_af2_screen_hit_rank1.cxc $1 $2

> alias map_missense runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/af_missense_coloring.cxc $1 $2

> alias missense mutationscores define avg fromScore amiss setAttribute true
> combine mean

> runscript /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/chimerax-trimmings/chimerax_trimmings.py

> runscript /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/chimerax-trimmings/map_salami.py

> camera ortho

> cofr centerOfView

> mousemode alt rightMode "contour level"

> mousemode rightMode clip

> mousemode alt leftMode "translate selected models"

> mousemode shift leftMode "rotate selected models"

> alias cootmode_white set bgColor white; surface cap false; surface style
> solid; nucleotides #* atoms; lighting flat; graphics silhouettes false;
> style stick; ~rib; color ##num_residues orange; color byhet ; disp
> ##num_residues & ##display; ~disp @H*; style ions sphere; style solvent
> ball; size ballscale 0.2; size stickradius 0.07; transparency 85; cofr
> centerofview; clip near -10 far 10 position cofr; color ~##num_residues
> medium blue

> alias usage cootmode_white synopsis "Apply the white-background Coot-style
> display preset"

> alias cootmode set bgColor black; surface cap false; surface style solid;
> nucleotides #* atoms; lighting flat; graphics silhouettes false; style
> stick; ~rib; color ##num_residues gold; color byhet ; disp ##num_residues &
> ##display; ~disp @H*; style ions sphere; style solvent ball; size ballscale
> 0.2; size stickradius 0.07; transparency 70; cofr centerofview; clip near
> -10 far 10 position cofr; color ~##num_residues cornflower blue

> alias usage cootmode synopsis "Apply the dark-background Coot-style display
> preset"

> alias cootmode_mesh surface cap false; surface style mesh; lighting flat;
> nucleotides #* atoms; graphics silhouettes false; style stick; ~rib; color
> ##num_residues gold; color byhet ; disp ##num_residues & ##display; ~disp
> @H*; style solvent ball; style ions sphere; size ballscale 0.2; size
> stickradius 0.07; cofr centerofview; clip near -10 far 10 position cofr;
> color ~##num_residues #3d60ffff; transparency 50

> alias usage cootmode_mesh synopsis "Apply the mesh Coot-style display
> preset"

> alias centersel cofr sel; clip near 10 position cofr; clip far -10 position
> cofr; cofr centerOfView showpivot true; view sel

> alias usage centersel synopsis "Center the view on the selection and apply
> local clipping"

> functionkey F1 prevmodel

> functionkey F2 nextmodel

> functionkey F3 centersel

> functionkey F4 view all

> functionkey F5 togglemaps

> functionkey F6 togglemodels

> functionkey F7 cyclelighting

> functionkey F8 cyclemodeldisplay

> functionkey F9 prevmap

> functionkey F10 nextmap

> buttonpanel Shortcuts rows 3 columns 5

> buttonpanel Shortcuts add Vol_Viewer command "tool show 'Volume Viewer'"

> buttonpanel Shortcuts add Model_Panel command "tool show Models"

> buttonpanel Shortcuts add Log command "tool show Log"

> buttonpanel Shortcuts add togglemaps command togglemaps

> buttonpanel Shortcuts add togglemodels command togglemodels

> buttonpanel Shortcuts add previous_model command prevmodel

> buttonpanel Shortcuts add next_model command nextmodel

> volume defaultvalues limitVoxelCount false voxelLimitForPlane
> 1000000000000000 voxelLimitForOpen 1000000000000000 saveSettings true

Saved volume settings  

> buttonpanel Shortcuts add view command view

> buttonpanel Shortcuts add selbetween command "ks ri"

> buttonpanel Shortcuts add rainbow_last command "rainbow last-opened chain
> palette BuPu"

> buttonpanel Shortcuts add rainbow command "rainbow chain palette Bupu"

> buttonpanel Shortcuts add hide_unsel command "hide ~sel & ##selected c,a,s;
> show sel c"

UCSF ChimeraX version: 1.11.1 (2026-01-23)  
© 2016-2025 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

Populating font family aliases took 98 ms. Replace uses of missing font family
"Arial, Helvetica, Sans-serif" with one that exists to avoid this cost.  

Chain information for fold_2025_01_30_14_44_eif4a3_aly_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Computing secondary structure  

> hide #1 atoms

> hide #1 surfaces

> show #1 cartoons

Found 17 residue or atom pairs within distance 3 with pae <= 30  

> name frozen af_contact_residues_model_0
> /A:12,14,16,20,172-173,200,205-206,208,230-231,234-235/B:85-87,89-90,121,124,128,164,168,172,244,246,250

> interfaces select #1&/A contacting #1&/B bothSides true

71 contacting residues  

> rainbow #1 chains palette bupu

> color byhetero

> name frozen interface_residues_model_0
> /A:12-14,16-18,20,33,76,165,168-169,172-174,179,196,198-200,202-203,205-211,231-232,234-235,286-287/B:6,81,83-93,121,124-125,128,160,163-164,166-172,175,237,243-244,246-247,250-251,254

> select interface_residues_model_0

616 atoms, 601 bonds, 16 pseudobonds, 71 residues, 2 models selected  

> show interface_residues_model_0 atoms

> show interface_residues_model_0 bonds

> style interface_residues_model_0 stick

Changed 616 atom styles  

> show af_contact_residues_model_0&sidechain atoms

> show af_contact_residues_model_0&sidechain bonds

> style af_contact_residues_model_0&sidechain stick

Changed 172 atom styles  
Opened 1 AF3 top hit pair(s).  
Run metadata was written to:  
/Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
VBC/scripts/python/Mendel_ChimeraX/Example_data/fold_2025_01_30_14_44_eif4a3_aly/analysis/fold_2025_01_30_14_44_eif4a3_aly/af3-top  
Contacts/interfaces were prepared for display. Files are written only when you
use 'Save Contacts and Interfaces' for the active model.  
Drag select of 126 atoms, 45 residues, 5 pseudobonds, 109 bonds  

> select clear

Drag select of 112 atoms, 39 residues, 4 pseudobonds, 97 bonds  

Window position QRect(0,994 600x324) outside any known screen, using primary
screen  

Drag select of 147 atoms, 67 residues, 7 pseudobonds, 129 bonds  
Drag select of 205 atoms, 80 residues, 10 pseudobonds, 181 bonds  

> select /B:257

7 atoms, 6 bonds, 1 residue, 1 model selected  

> select add /B:240

12 atoms, 10 bonds, 2 residues, 1 model selected  

> ks ri

> select #2.1/B:240-257

140 atoms, 140 bonds, 18 residues, 1 model selected  
Drag select of 251 atoms, 205 residues, 12 pseudobonds, 223 bonds  
Drag select of 15 atoms, 158 residues, 12 bonds  

> select /A:84-233 /B:236-257

> select /A:84-233 /B:236-257

1343 atoms, 1359 bonds, 3 pseudobonds, 172 residues, 2 models selected  
Applied PAE hide-unselected to 1 model(s) in this run.  

> select /A:82-235 /B:231-257

> hide ~sel & ##selected cartoons,atoms,surfaces

> show sel cartoons

> select /B:99-191 /A:13-18

> select clear

> select /B:99-191 /A:13-18

759 atoms, 768 bonds, 3 pseudobonds, 99 residues, 2 models selected  

> select clear

> select /B:257

7 atoms, 6 bonds, 1 residue, 1 model selected  

> select add /B:240

12 atoms, 10 bonds, 2 residues, 1 model selected  

> ks ri

> select #2.1/B:240-257

140 atoms, 140 bonds, 18 residues, 1 model selected  

> select /A:30-242 /B:234-257

Chain information for fold_2026_05_13_13_22_alyref_uap56_thoc2_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
C | .  
  

> hide #1 atoms

> hide #1 surfaces

> show #1 cartoons

Found 12 residue or atom pairs within distance 3 with pae <= 30  
Found 0 residue or atom pairs within distance 3 with pae <= 30  

> name frozen af_contact_residues_model_0
> #1/A:4,6-7,10,235-236,243-244,248,250-251,254/B:208-210,212,218,241,244,275-276,299,309

> interfaces select #1&/A contacting #1&/B bothSides true

48 contacting residues  

> interfaces select #1&/A contacting #1&/C bothSides true

0 contacting residues  

> rainbow #1 chains palette bupu

> color byhetero

> name frozen interface_residues_model_0
> #1/A:1,4-6,8-10,12-13,16-17,235,237-238,240,243-244,246-248,250-251,253-254/B:205-206,208-210,212,215-216,220-221,241,244,271-272,275-276,279,298-299,302,306,309-310,362

> select interface_residues_model_0

424 atoms, 402 bonds, 9 pseudobonds, 48 residues, 2 models selected  

> show interface_residues_model_0 atoms

> show interface_residues_model_0 bonds

> style interface_residues_model_0 stick

Changed 424 atom styles  

> show af_contact_residues_model_0&sidechain atoms

> show af_contact_residues_model_0&sidechain bonds

> style af_contact_residues_model_0&sidechain stick

Changed 137 atom styles  
Opened 1 AF3 top hit pair(s).  
Run metadata was written to:  
/Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
VBC/scripts/python/Mendel_ChimeraX/Example_data/fold_2026_05_13_13_22_alyref_uap56_thoc2/analysis/fold_2026_05_13_13_22_alyref_uap56_thoc2/af3-top  
Contacts/interfaces were prepared for display. Files are written only when you
use 'Save Contacts and Interfaces' for the active model.  
Computing secondary structure  

> select #3.1/B:267 #3.1/A:29

> view

Applied PAE hide-unselected to 1 model(s) in this run.  

> view

> hide af_contact_residues_model_0&sidechain atoms

> hide af_contact_residues_model_0&sidechain bonds

Found 0 residue or atom pairs within distance 3 with pae <= 16  
Applied PAE show-only and refreshed AlphaFold contacts at threshold 16 for 1
model(s) in this run. Contact display was refreshed for 1 model(s).  
Found 0 residue or atom pairs within distance 3 with pae <= 16  
No AlphaFold contacts with PAE <= 16 were found for model_0 on chain pair A-C.  
Found 0 residue or atom pairs within distance 3 with pae <= 16  
No AlphaFold contacts with PAE <= 16 were found for model_0 on chain pair A-C.  
Found 0 residue or atom pairs within distance 3 with pae <= 16  
No AlphaFold contacts with PAE <= 16 were found for model_0 on chain pair A-C.  

> help circosplot

No help found for 'circosplot'  

> circosplot

Unknown command: circosplot  

> circplot

Unknown command: circplot  

> toolshed show

Window position QRect(1903,199 657x1177) outside any known screen, using
primary screen  

> circoscontacts

circoscontacts: writing intermediate files to
/var/folders/l8/nt94jvjd7bg27cksyp_hvxnh0000gp/T/circoscontacts_0g_syu17  
227 contacts  
375 contacts  
circoscontacts: wrote
/var/folders/l8/nt94jvjd7bg27cksyp_hvxnh0000gp/T/circoscontacts_0g_syu17/contacts_circos.html  
circoscontacts: use the Save HTML button in the page to copy output elsewhere.  
circoscontacts: opened HTML in default browser
(/var/folders/l8/nt94jvjd7bg27cksyp_hvxnh0000gp/T/circoscontacts_0g_syu17/contacts_circos.html)  
circoscontacts: temporary directory retained for this run to keep artifacts
accessible.  

> hide #3.1 atoms

> hide #3.1 pseudobonds

> hide #3.1 surfaces

> show #3.1 cartoons

> select clear

Reset display for AF3 top hit fold_2026_05_13_13_22_alyref_uap56_thoc2.  
Applied PAE hide-unselected to 1 model(s) in this run.  

> blastprotein #3

Cannot start BLAST job: please choose exactly one chain (3 were specified)  

> blastprotein #3/C

Webservices job id: DKPPLNOA9FNN357X  
Webservices job finished: DKPPLNOA9FNN357X  
Parsing BlastProtein results failed: HTTP Error 415: Unsupported Media Type  




OpenGL version: 4.1 Metal - 90.5
OpenGL renderer: Apple M3 Pro
OpenGL vendor: Apple

Python: 3.11.9
Locale: en_US.UTF-8
Qt version: PyQt6 6.9.1, Qt 6.9.0
Qt runtime version: 6.9.2
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: MacBook Pro
      Model Identifier: Mac15,6
      Model Number: Z1AU002HPD/A
      Chip: Apple M3 Pro
      Total Number of Cores: 11 (5 performance and 6 efficiency)
      Memory: 18 GB
      System Firmware Version: 13822.61.10
      OS Loader Version: 13822.61.10

Software:

    System Software Overview:

      System Version: macOS 26.2 (25C56)
      Kernel Version: Darwin 25.2.0
      Time since boot: 15 days, 6 hours, 53 minutes

Graphics/Displays:

    Apple M3 Pro:

      Chipset Model: Apple M3 Pro
      Type: GPU
      Bus: Built-In
      Total Number of Cores: 14
      Vendor: Apple (0x106b)
      Metal Support: Metal 4
      Displays:
        Color LCD:
          Display Type: Built-in Liquid Retina XDR Display
          Resolution: 3024 x 1964 Retina
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal
        HP Z32:
          Resolution: 5120 x 2880 (5K/UHD+ - Ultra High Definition Plus)
          UI Looks like: 2560 x 1440 @ 60.00Hz
          Mirror: Off
          Online: Yes
          Rotation: Supported


Installed Packages:
    aiohappyeyeballs: 2.6.1
    aiohttp: 3.13.1
    aiosignal: 1.4.0
    alabaster: 1.0.0
    annotated-types: 0.7.0
    anyio: 4.12.1
    appdirs: 1.4.4
    appnope: 0.1.4
    asttokens: 3.0.1
    attrs: 25.4.0
    babel: 2.17.0
    beautifulsoup4: 4.13.5
    blockdiag: 3.0.0
    blosc2: 3.12.2
    build: 1.3.0
    certifi: 2025.7.14
    cftime: 1.6.5
    charset-normalizer: 3.4.4
    ChimeraX-AddCharge: 1.5.20
    ChimeraX-AddH: 2.2.8
    ChimeraX-AFPredictionToolbars: 1.3.22
    ChimeraX-AlignmentAlgorithms: 2.0.2
    ChimeraX-AlignmentHdrs: 3.6.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 3.1.1
    ChimeraX-AlphaFold: 1.0.1
    ChimeraX-AltlocExplorer: 1.2
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Animations: 1.0
    ChimeraX-Aniso: 1.3.2
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.61.4
    ChimeraX-AtomicLibrary: 14.2.1
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.3
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 3.0.0
    ChimeraX-Boltz: 1.1
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.2
    ChimeraX-BuildStructure: 2.13.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.6.0
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.5
    ChimeraX-ChemGroup: 2.0.2
    ChimeraX-CircosContacts: 0.4.21
    ChimeraX-Clashes: 2.3
    ChimeraX-Clipper: 0.26.1
    ChimeraX-ColorActions: 1.0.5
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.8
    ChimeraX-CommandLine: 1.3.0
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.11.1
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.5
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.4
    ChimeraX-Dicom: 1.2.7
    ChimeraX-DistMonitor: 1.4.2
    ChimeraX-DockPrep: 1.1.4
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.4.1
    ChimeraX-Hbonds: 2.5.3
    ChimeraX-Help: 1.3
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.4
    ChimeraX-ISOLDE: 1.11.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-KVFinder: 1.7.3
    ChimeraX-Label: 1.2
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.2.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-LowpassMap: 0.1
    ChimeraX-Maestro: 1.9.2
    ChimeraX-Map: 1.3
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.2.2
    ChimeraX-MCopy: 1.0
    ChimeraX-MCPServer: 0.1.0
    ChimeraX-MDcrds: 2.17.2
    ChimeraX-MedicalToolbar: 1.1
    ChimeraX-Meeting: 1.0.1
    ChimeraX-Minimize: 1.3.2
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.16
    ChimeraX-MMTF: 2.2
    ChimeraX-ModelArchive: 1.0
    ChimeraX-Modeller: 1.5.22
    ChimeraX-ModelPanel: 1.6
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0.1
    ChimeraX-MutationScores: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.2
    ChimeraX-NMRSTAR: 1.0.2
    ChimeraX-NRRD: 1.2
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.15.2
    ChimeraX-OrthoPick: 1.0.1
    ChimeraX-PDB: 2.7.12
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.5
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1.4
    ChimeraX-ProfileGrids: 1.4.2
    ChimeraX-PubChem: 2.2
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.6.5
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.3.3
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.2
    ChimeraX-Scenes: 0.3.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.3
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-Segmentations: 3.5.10
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.17.3
    ChimeraX-Shape: 1.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.2.1
    ChimeraX-ShowSequences: 1.0.3
    ChimeraX-SideView: 1.0.1
    ChimeraX-SimilarStructures: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.19.1
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.2.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.5.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.2.3
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.49.1
    ChimeraX-Umap: 1.0
    ChimeraX-uniprot: 2.3.2
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDock: 1.5.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.5
    ChimeraX-Zone: 1.0.1
    click: 8.3.1
    colorama: 0.4.6
    comm: 0.2.3
    contourpy: 1.3.3
    coverage: 7.13.1
    cxservices: 1.2.3
    cycler: 0.12.1
    Cython: 3.1.4
    debugpy: 1.8.19
    decorator: 5.2.1
    docutils: 0.21.2
    executing: 2.2.1
    filelock: 3.19.1
    fonttools: 4.61.1
    frozenlist: 1.8.0
    funcparserlib: 2.0.0a0
    glfw: 2.10.0
    grako: 3.16.5
    h11: 0.16.0
    h5py: 3.15.1
    html2text: 2025.4.15
    httpcore: 1.0.9
    httpx: 0.28.1
    httpx-sse: 0.4.3
    idna: 3.11
    ihm: 2.2
    imagecodecs: 2024.6.1
    imagesize: 1.4.1
    iniconfig: 2.3.0
    ipykernel: 6.30.1
    ipython: 9.5.0
    ipython_pygments_lexers: 1.1.1
    ipywidgets: 8.1.8
    jedi: 0.19.2
    Jinja2: 3.1.6
    jsonschema: 4.26.0
    jsonschema-specifications: 2025.9.1
    jupyter_client: 8.6.3
    jupyter_core: 5.9.1
    jupyterlab_widgets: 3.0.16
    kiwisolver: 1.4.9
    line_profiler: 5.0.0
    lxml: 6.0.2
    lz4: 4.3.2
    Markdown: 3.8.2
    MarkupSafe: 3.0.3
    matplotlib: 3.10.7
    matplotlib-inline: 0.2.1
    mcp: 1.18.0
    msgpack: 1.1.1
    multidict: 6.7.0
    ndindex: 1.10.1
    nest-asyncio: 1.6.0
    netCDF4: 1.6.5
    networkx: 3.3
    nibabel: 5.2.0
    nptyping: 2.5.0
    numexpr: 2.14.1
    numpy: 1.26.4
    OpenMM: 8.2.0
    openvr: 1.26.701
    packaging: 25.0
    ParmEd: 4.2.2
    parso: 0.8.5
    pep517: 0.13.1
    pexpect: 4.9.0
    pickleshare: 0.7.5
    pillow: 11.3.0
    pip: 25.2
    pkginfo: 1.12.1.2
    platformdirs: 4.5.1
    pluggy: 1.6.0
    prompt_toolkit: 3.0.52
    propcache: 0.4.1
    psutil: 7.0.0
    ptyprocess: 0.7.0
    pure_eval: 0.2.3
    py-cpuinfo: 9.0.0
    pybind11: 3.0.1
    pycollada: 0.8
    pydantic: 2.12.5
    pydantic-settings: 2.12.0
    pydantic_core: 2.41.5
    pydicom: 2.4.4
    Pygments: 2.18.0
    pynmrstar: 3.3.6
    pynrrd: 1.0.0
    PyOpenGL: 3.1.10
    PyOpenGL-accelerate: 3.1.10
    pyopenxr: 1.1.4501
    pyparsing: 3.3.2
    pyproject_hooks: 1.2.0
    PyQt6-commercial: 6.9.1
    PyQt6-Qt6: 6.9.2
    PyQt6-WebEngine-commercial: 6.9.0
    PyQt6-WebEngine-Qt6: 6.9.2
    PyQt6_sip: 13.10.2
    pytest: 9.0.2
    pytest-cov: 7.0.0
    python-dateutil: 2.9.0.post0
    python-dotenv: 1.2.1
    python-multipart: 0.0.21
    pyzmq: 27.1.0
    qtconsole: 5.7.0
    QtPy: 2.4.3
    qtshim: 1.2
    RandomWords: 0.4.0
    referencing: 0.37.0
    requests: 2.32.5
    roman-numerals: 4.1.0
    roman-numerals-py: 4.1.0
    rpds-py: 0.30.0
    scipy: 1.14.0
    setuptools: 80.9.0
    sfftk-rw: 0.8.1
    six: 1.17.0
    snowballstemmer: 3.0.1
    sortedcontainers: 2.4.0
    soupsieve: 2.8.3
    Sphinx: 8.2.3
    sphinx-autodoc-typehints: 3.2.0
    sphinxcontrib-applehelp: 2.0.0
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 2.0.0
    sphinxcontrib-htmlhelp: 2.1.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 2.0.0
    sphinxcontrib-serializinghtml: 2.0.0
    sse-starlette: 3.2.0
    stack-data: 0.6.3
    starlette: 0.52.1
    superqt: 0.7.6
    tables: 3.10.2
    tcia_utils: 1.5.1
    tifffile: 2025.3.13
    tinyarray: 1.2.5
    tornado: 6.5.4
    traitlets: 5.14.3
    typing-inspection: 0.4.2
    typing_extensions: 4.15.0
    urllib3: 2.6.3
    uvicorn: 0.40.0
    wcwidth: 0.3.2
    webcolors: 24.11.1
    wheel: 0.45.1
    wheel-filename: 1.4.2
    widgetsnbextension: 4.0.15
    yarl: 1.22.0

[Eric Pettersen]

Hi Matthias,

Thanks for reporting this problem. It is fixed in the daily build and the 1.12 release candidate, so it you use one of those then Blast will work for you.

--Eric

Eric Pettersen
UCSF Computer Graphics Lab