Timeline

Jul 22, 2026: Yesterday

6:28 PM ChangeLog edited by Tom Goddard

(diff)

6:23 PM ChangeLog edited by Tom Goddard

(diff)

6:21 PM ChangeLog edited by Tom Goddard

(diff)

6:18 PM Ticket #20787 (Add alphafold fetch for mutation scores sequences) closed by Tom Goddard

fixed: Done. If the mutation set is fetched from MaveDB it usually has a …

5:48 PM Ticket #20787 (Add alphafold fetch for mutation scores sequences) created by Tom Goddard

Add a button to the Mutation Scores panel to fetch an AlphaFold …

5:05 PM Ticket #20786 (Added fetching of MaveDB mutation data) closed by Tom Goddard

fixed: Done. MaveDB entry identifiers are 00000001, 00000002, .... I allow …

4:48 PM Ticket #20786 (Added fetching of MaveDB mutation data) created by Tom Goddard

Allow fetching mutation score data from the Multiplexed Assays of …

4:43 PM Ticket #20785 (Allow coloring structure at residues with uniprot variant mutations ...) closed by Tom Goddard

fixed: Done. I added a mutationscores merge command and also added an …

4:02 PM Ticket #20785 (Allow coloring structure at residues with uniprot variant mutations ...) created by Tom Goddard

I'd like to be able to look at deep mutational scan scores for just …

3:51 PM Ticket #20142 (Make a mutation score heatmap GUI) closed by Tom Goddard

fixed: Done. The heatmaps are reasonably usable now. If more improvements …

3:49 PM Ticket #19403 (Add structure coloring controls to mutation scores scatter plot) closed by Tom Goddard

fixed: Done. The mutation score ranges option was documented by Elaine. All …

3:43 PM Ticket #20597 (Opening mutation score .csv file does not show the scores in the order ...) closed by Tom Goddard

fixed: Fixed. I made the scores appear in alphabetical order.

3:40 PM Ticket #20784 (OpenFold prediction fails if model parameters did not download during ...) created by Tom Goddard

In ticket #20783 the anonymous user tries to run several OpenFold …

1:58 PM ChangeLog edited by Eric Pettersen

(diff)

1:58 PM ChangeLog edited by Eric Pettersen

(diff)

1:58 PM ChangeLog edited by Eric Pettersen

(diff)

1:57 PM ChangeLog edited by Eric Pettersen

(diff)

12:22 PM Ticket #20783 (ViewDock opening a swissdock file: not enough values to unpack ...) created by chimerax-bug-report@…

[…]

11:10 AM Ticket #20782 (Python shell debugger warning) closed by Tom Goddard

not a bug

11:03 AM Ticket #20780 (Dock Prep: acc_phi_psi() takes 8 positional arguments but 9 were given) closed by Tom Goddard

duplicate: Same as #20781

11:01 AM Ticket #20777 (pyKVFinder install failed on Mac: '/usr/bin/clang' failed with exit code 1) closed by Tom Goddard

duplicate: Same as #20779

8:18 AM Ticket #20782 (Python shell debugger warning) created by alexandra.zahradnikova@…

[…]

3:14 AM Ticket #20781 (Dock Prep: acc_phi_psi() takes 8 positional arguments but 9 were given) created by shreyasukar@…

[…]

3:13 AM Ticket #20780 (Dock Prep: acc_phi_psi() takes 8 positional arguments but 9 were given) created by chimerax-bug-report@…

[…]