[Chimera-users] Question regarding RR Distance Maps

Elaine Meng meng at cgl.ucsf.edu
Wed Jul 3 11:03:47 PDT 2019

Hello Meysam,
Are you referring to the matrix display or to the exported file of values?   We noticed that the very bottom row is missing from the display (and will look into fixing that), but in our own tests, it is included in the exported file of distances.

If you are saying the matrix in the exported file is not symmetrical, we would need you to send us an example.  You could use menu: Help… Report a Bug, say in the description what the structure is, and attach the exported file to the report.

I hope this helps,
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Jul 3, 2019, at 7:58 AM, Meysam T. Chorsi <meysam.chorsi at uconn.edu> wrote:
> Hello,
> I need to use Chimera to determine the distance map, but for some reason the output matrix is not symmetric. I used other software as well, they all giving a symmetric matrix which makes sense to me. Could you please let me know how can I fix this? Thank you
> Sincerely, Meysam
> -- 
> Meysam T. Chorsi
> University of Connecticut 
> 191 Auditorium Road, Storrs, CT 06269, USA

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