Chimera Commands Index

bondzone [ spacing ]


Bondzone specifies that points along any selected bonds (and Volume Tracer links) should be used in addition to any selected atoms (and Volume Tracer markers) to define zones with the following tools:

The points along the bonds will be placed spacing × (bond radius) apart, with default spacing=1. Link radii in Volume Tracer are equivalent to bond radii, except when a link radius is 0.0, the corresponding bond radius is 1.0.

~Bondzone restores the default behavior of using only the selected atoms to define zones with the tools listed above. Bondzone status is stored in the preferences file.