[Chimera-users] APBS mobile ion option

Eita Sasaki sasaki at org.chem.ethz.ch
Thu Aug 11 06:43:34 PDT 2016


I'd like to run APBS command with mobile ions (150 mM NaCl).
I tried the following command, but it did not work.

apbs molecule #1 ion true _posion 1,0.15,1.16 _negion -1,0.15,1.67

If I typed just "apbs molecule #1" it works (without mobile ions).
I am wondering my command was perhaps wrong but don't know the right one.

I hope you could help me to solve the problem
Thank you in advance.

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