[Chimera-users] problem related to open the chimera file by Coot

Elaine Meng meng at cgl.ucsf.edu
Thu Mar 19 08:35:15 PDT 2015


Dear Smith,
It may be the same issue as discussed in this previous post -- if so, it is a Coot problem, but a workaround is described:

<http://plato.cgl.ucsf.edu/pipermail/chimera-users/2015-February/010736.html>

I hope this helps,
Elaine
----------
Elaine C. Meng, Ph.D. 
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Mar 18, 2015, at 11:10 PM, "Smith Liu" <smith_liu123 at 163.com> wrote:

> Dear All,
>  
> I have fit a PDB file with a MRC by the Chimera. I saved both the fitted PDB file and the fitted MRC file by coot. When I open the fitted PDB file and the fitted MRC file  by Chimera at the same time, they still fit perfectly. However when I open the Chimera  fitted PDB file and the Chimera fitted MRC file by coot, the protein backbone (and the sidechains) does not fit the MRC file anymore.
>  
> Will you please tell me what should I do in order to have the Chimera fitted PDB file and the Chimera fitted MRC file still fit in Coot?
>  
> I am looking forward to getting your reply.
>  
> Smith




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