[Chimera-users] Creating a cubic box for a density map

Tom Goddard goddard at sonic.net
Sun Jan 18 10:29:36 PST 2015

Hi Juan,

  The Chimera Segger dialog menu entry Regions / Extract Densities let’s you make cube shaped maps for selected segmented regions.  I guess you were using Segger menu File / Save Selected Regions which does not give that option.


> On Jan 18, 2015, at 7:55 AM, Juan Luis Loredo Varela <jlvl500 at york.ac.uk> wrote:
> Dear Chimera users
> When I use the Segment map option to save a specific fragment as .mrc file, Chimera uses the minimal box containing the segment. Does anyone know how to modify the dimensions of a density map to have it in a cubic box that can be used in Flex-EM?
> Thanks
> Juan
> -- 
> Juan Luis Loredo Varela
> PhD Student
> Antson Group
> York Structural Biology Laboratory L0
> Department of Chemistry
> University of York
> _______________________________________________
> Chimera-users mailing list
> Chimera-users at cgl.ucsf.edu
> http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20150118/26df84f6/attachment.html>

More information about the Chimera-users mailing list