[Chimera-users] Charges for PTR+DT

Elaine Meng meng at cgl.ucsf.edu
Mon Aug 17 10:48:58 PDT 2015


Sorry, accidentally clicked “send” before I was done editing, small corrections below.
Elaine

> I can see it is both protein and DNA.  For docking, did you really want both protein and DNA?  If you wanted the protein only, you would need to delete the DNA chains.  You might also want to delete ligand residues topotecan and others (listed at the RCSB PDB website 

The last part should be:
(listed at the RCSB PDB website, link below for structure 1k4t)

> To hide ribbon:sc 5
> ~ribbon

should be:
To hide ribbon:
~ribbon


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