Subject: problem using kr command in AutoAssign
From: amrita bhu2005
Date: Feb 8, 2011

Next: 775


Dear All,
I am trying to use restricted peak picking command (kr) of Auto Assign. What I
am doing is that - first I am picking peaks in 1H-15N HSQC spectra and creating
a peak list for it. And then I am using this kr command to pick peaks in 3D HNCA
spectra using HSQC peaks as reference. But on obtaining the peak list from the
peak option, I am not getting proper values for the three dimensions (two values
are depicting values for the nitrogen axis and one for hydrogen whereas I am
expecting the values for N,H and C axis). Kindly suggest me the steps to use the
kr command.

Thanking You.

Navdeep Gogna, Amrita Kumari
IISER, Mohali,
Chandigarh