id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 9095 XMAS: crash in ~QGridLayout() b.vermeulen@… Richard Scheltema "{{{ The following bug report has been submitted: Platform: macOS-10.16-x86_64-i386-64bit ChimeraX Version: 1.3 (2021-12-08 23:08:33 UTC) Description Last time you used ChimeraX it crashed. When using the package XMAS to analyse crosslinking mass spectrometry data, closing the visualisation window associated with XMAS leads to a crash of ChimeraX. Fatal Python error: Segmentation fault Current thread 0x0000000205218600 (most recent call first): File ""/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py"", line 301 in event_loop File ""/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py"", line 867 in init File ""/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py"", line 1018 in File ""/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py"", line 87 in _run_code File ""/Applications/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py"", line 197 in _run_module_as_main {""app_name"":""ChimeraX"",""timestamp"":""2023-05-30 12:49:40.00 +0200"",""app_version"":""1.3.0"",""slice_uuid"":""9596eff5-d2be-396c-9c4e-6177235c3dae"",""build_version"":""1.3.0.0"",""platform"":1,""bundleID"":""edu.ucsf.cgl.ChimeraX"",""share_with_app_devs"":0,""is_first_party"":0,""bug_type"":""309"",""os_version"":""macOS 12.5.1 (21G83)"",""incident_id"":""E8CC473D-AD6B-44D3-8209-73260D81EABE"",""name"":""ChimeraX""} { ""uptime"" : 1000000, ""procLaunch"" : ""2023-05-30 12:23:47.3510 +0200"", ""procRole"" : ""Foreground"", ""version"" : 2, ""userID"" : 503, ""deployVersion"" : 210, ""modelCode"" : ""MacBookPro18,3"", ""procStartAbsTime"" : 24376130944884, ""coalitionID"" : 11277, ""osVersion"" : { ""train"" : ""macOS 12.5.1"", ""build"" : ""21G83"", ""releaseType"" : ""User"" }, ""captureTime"" : ""2023-05-30 12:49:33.7457 +0200"", ""incident"" : ""E8CC473D-AD6B-44D3-8209-73260D81EABE"", ""bug_type"" : ""309"", ""pid"" : 65032, ""procExitAbsTime"" : 24413243206087, ""translated"" : true, ""cpuType"" : ""X86-64"", ""procName"" : ""ChimeraX"", ""procPath"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/MacOS\/ChimeraX"", ""bundleInfo"" : {""CFBundleShortVersionString"":""1.3.0"",""CFBundleVersion"":""1.3.0.0"",""CFBundleIdentifier"":""edu.ucsf.cgl.ChimeraX""}, ""storeInfo"" : {""deviceIdentifierForVendor"":""A2E45DE5-54D7-5040-99E0-7BD9B999291C"",""thirdParty"":true}, ""parentProc"" : ""launchd"", ""parentPid"" : 1, ""coalitionName"" : ""edu.ucsf.cgl.ChimeraX"", ""crashReporterKey"" : ""B19A06E3-DCCD-D801-C243-0206CF6237B0"", ""wakeTime"" : 2451, ""sleepWakeUUID"" : ""333A7E28-59A7-4771-9438-F6257EB54601"", ""sip"" : ""enabled"", ""vmRegionInfo"" : ""0x7deea89bf708 is not in any region. Bytes after previous region: 32907646990089 Bytes before following region: 2195966920952\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n MALLOC_NANO (reserved) 6000b8000000-6000c0000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)\n---> GAP OF 0x1fed32700000 BYTES\n MALLOC_TINY 7fedf2700000-7fedf2800000 [ 1024K] rw-\/rwx SM=PRV "", ""isCorpse"" : 1, ""exception"" : {""codes"":""0x0000000000000001, 0x0000fdeea89bf708"",""rawCodes"":[1,279201472837384],""type"":""EXC_BAD_ACCESS"",""signal"":""SIGSEGV"",""subtype"":""KERN_INVALID_ADDRESS at 0x0000fdeea89bf708 -> 0x00007deea89bf708 (possible pointer authentication failure)""}, ""vmregioninfo"" : ""0x7deea89bf708 is not in any region. Bytes after previous region: 32907646990089 Bytes before following region: 2195966920952\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n MALLOC_NANO (reserved) 6000b8000000-6000c0000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)\n---> GAP OF 0x1fed32700000 BYTES\n MALLOC_TINY 7fedf2700000-7fedf2800000 [ 1024K] rw-\/rwx SM=PRV "", ""extMods"" : {""caller"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""system"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""targeted"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""warnings"":0}, ""faultingThread"" : 0, ""threads"" : [{""triggered"":true,""id"":127266328,""threadState"":{""flavor"":""x86_THREAD_STATE"",""rbp"":{""value"":15729190784651315000},""r12"":{""value"":259},""rosetta"":{""tmp2"":{""value"":140703180730372},""tmp1"":{""value"":140705601677588},""tmp0"":{""value"":18446744073709551615}},""rbx"":{""value"":8676017664,""symbolLocation"":0,""symbol"":""_main_thread""},""r8"":{""value"":11},""r15"":{""value"":22},""r10"":{""value"":8676017664,""symbolLocation"":0,""symbol"":""_main_thread""},""rdx"":{""value"":0},""rdi"":{""value"":15729190784651315000},""r9"":{""value"":15729190784651315000},""r13"":{""value"":0},""rflags"":{""value"":643},""rax"":{""value"":0},""rsp"":{""value"":5117571208},""r11"":{""value"":1280},""rcx"":{""value"":0},""r14"":{""value"":11},""rsi"":{""value"":5117571208}},""name"":""CrBrowserMain"",""queue"":""com.apple.main-thread"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":32782,""symbol"":""__pthread_kill"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":25087,""symbol"":""pthread_kill"",""symbolLocation"":263,""imageIndex"":2},{""imageOffset"":279256,""symbol"":""raise"",""symbolLocation"":26,""imageIndex"":3},{""imageOffset"":15869,""symbol"":""_sigtramp"",""symbolLocation"":29,""imageIndex"":4},{""imageOffset"":0,""imageIndex"":0},{""imageOffset"":154364,""symbol"":""QGridLayoutPrivate::deleteAll()"",""symbolLocation"":172,""imageIndex"":5},{""imageOffset"":171943,""symbol"":""QGridLayout::~QGridLayout()"",""symbolLocation"":39,""imageIndex"":5},{""imageOffset"":799288,""symbol"":""non-virtual thunk to sipQGridLayout::~sipQGridLayout()"",""symbolLocation"":56,""imageIndex"":6},{""imageOffset"":143197,""symbol"":""QBoxLayoutPrivate::deleteAll()"",""symbolLocation"":189,""imageIndex"":5},{""imageOffset"":151847,""symbol"":""QVBoxLayout::~QVBoxLayout()"",""symbolLocation"":39,""imageIndex"":5},{""imageOffset"":1315943,""symbol"":""sipQVBoxLayout::~sipQVBoxLayout()"",""symbolLocation"":55,""imageIndex"":6},{""imageOffset"":236119,""symbol"":""QWidget::~QWidget()"",""symbolLocation"":407,""imageIndex"":5},{""imageOffset"":1440215,""symbol"":""sipQWidget::~sipQWidget()"",""symbolLocation"":55,""imageIndex"":6},{""imageOffset"":2240868,""symbol"":""QObjectPrivate::deleteChildren()"",""symbolLocation"":228,""imageIndex"":7},{""imageOffset"":236718,""symbol"":""QWidget::~QWidget()"",""symbolLocation"":1006,""imageIndex"":5},{""imageOffset"":1440215,""symbol"":""sipQWidget::~sipQWidget()"",""symbolLocation"":55,""imageIndex"":6},{""imageOffset"":2240868,""symbol"":""QObjectPrivate::deleteChildren()"",""symbolLocation"":228,""imageIndex"":7},{""imageOffset"":236718,""symbol"":""QWidget::~QWidget()"",""symbolLocation"":1006,""imageIndex"":5},{""imageOffset"":1101847,""symbol"":""sipQDockWidget::~sipQDockWidget()"",""symbolLocation"":55,""imageIndex"":6},{""imageOffset"":2242702,""symbol"":""QObject::event(QEvent*)"",""symbolLocation"":158,""imageIndex"":7},{""imageOffset"":310938,""symbol"":""QWidget::event(QEvent*)"",""symbolLocation"":4698,""imageIndex"":5},{""imageOffset"":1219879,""symbol"":""QDockWidget::event(QEvent*)"",""symbolLocation"":791,""imageIndex"":5},{""imageOffset"":1103487,""symbol"":""sipQDockWidget::event(QEvent*)"",""symbolLocation"":191,""imageIndex"":6},{""imageOffset"":68074,""symbol"":""QApplicationPrivate::notify_helper(QObject*, QEvent*)"",""symbolLocation"":266,""imageIndex"":5},{""imageOffset"":73233,""symbol"":""QApplication::notify(QObject*, QEvent*)"",""symbolLocation"":497,""imageIndex"":5},{""imageOffset"":1355193,""symbol"":""sipQApplication::notify(QObject*, QEvent*)"",""symbolLocation"":233,""imageIndex"":6},{""imageOffset"":2066996,""symbol"":""QCoreApplication::notifyInternal2(QObject*, QEvent*)"",""symbolLocation"":212,""imageIndex"":7},{""imageOffset"":2071929,""symbol"":""QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*)"",""symbolLocation"":809,""imageIndex"":7},{""imageOffset"":238169,""symbol"":""QCocoaEventDispatcherPrivate::processPostedEvents()"",""symbolLocation"":313,""imageIndex"":8},{""imageOffset"":240072,""symbol"":""QCocoaEventDispatcherPrivate::postedEventsSourceCallback(void*)"",""symbolLocation"":40,""imageIndex"":8},{""imageOffset"":521082,""symbol"":""__CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__"",""symbolLocation"":17,""imageIndex"":9},{""imageOffset"":520930,""symbol"":""__CFRunLoopDoSource0"",""symbolLocation"":180,""imageIndex"":9},{""imageOffset"":520288,""symbol"":""__CFRunLoopDoSources0"",""symbolLocation"":242,""imageIndex"":9},{""imageOffset"":514672,""symbol"":""__CFRunLoopRun"",""symbolLocation"":892,""imageIndex"":9},{""imageOffset"":512052,""symbol"":""CFRunLoopRunSpecific"",""symbolLocation"":562,""imageIndex"":9},{""imageOffset"":189926,""symbol"":""RunCurrentEventLoopInMode"",""symbolLocation"":292,""imageIndex"":10},{""imageOffset"":189258,""symbol"":""ReceiveNextEventCommon"",""symbolLocation"":594,""imageIndex"":10},{""imageOffset"":188645,""symbol"":""_BlockUntilNextEventMatchingListInModeWithFilter"",""symbolLocation"":70,""imageIndex"":10},{""imageOffset"":257965,""symbol"":""_DPSNextEvent"",""symbolLocation"":927,""imageIndex"":11},{""imageOffset"":251498,""symbol"":""-[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:]"",""symbolLocation"":1394,""imageIndex"":11},{""imageOffset"":195865,""symbol"":""-[NSApplication run]"",""symbolLocation"":586,""imageIndex"":11},{""imageOffset"":235055,""symbol"":""QCocoaEventDispatcher::processEvents(QFlags)"",""symbolLocation"":2495,""imageIndex"":8},{""imageOffset"":2050767,""symbol"":""QEventLoop::exec(QFlags)"",""symbolLocation"":431,""imageIndex"":7},{""imageOffset"":2068546,""symbol"":""QCoreApplication::exec()"",""symbolLocation"":130,""imageIndex"":7},{""imageOffset"":2344706,""symbol"":""meth_QApplication_exec_(_object*, _object*)"",""symbolLocation"":82,""imageIndex"":6},{""imageOffset"":503917,""symbol"":""cfunction_call"",""symbolLocation"":125,""imageIndex"":12},{""imageOffset"":246141,""symbol"":""_PyObject_MakeTpCall"",""symbolLocation"":365,""imageIndex"":12},{""imageOffset"":1132060,""symbol"":""call_function"",""symbolLocation"":876,""imageIndex"":12},{""imageOffset"":1120947,""symbol"":""_PyEval_EvalFrameDefault"",""symbolLocation"":25219,""imageIndex"":12},{""imageOffset"":248136,""symbol"":""function_code_fastcall"",""symbolLocation"":104,""imageIndex"":12},{""imageOffset"":256394,""symbol"":""method_vectorcall"",""symbolLocation"":202,""imageIndex"":12},{""imageOffset"":1131916,""symbol"":""call_function"",""symbolLocation"":732,""imageIndex"":12},{""imageOffset"":1120947,""symbol"":""_PyEval_EvalFrameDefault"",""symbolLocation"":25219,""imageIndex"":12},{""imageOffset"":1135235,""symbol"":""_PyEval_EvalCode"",""symbolLocation"":2611,""imageIndex"":12},{""imageOffset"":248017,""symbol"":""_PyFunction_Vectorcall"",""symbolLocation"":289,""imageIndex"":12},{""imageOffset"":1131916,""symbol"":""call_function"",""symbolLocation"":732,""imageIndex"":12},{""imageOffset"":1121099,""symbol"":""_PyEval_EvalFrameDefault"",""symbolLocation"":25371,""imageIndex"":12},{""imageOffset"":1135235,""symbol"":""_PyEval_EvalCode"",""symbolLocation"":2611,""imageIndex"":12},{""imageOffset"":1095435,""symbol"":""PyEval_EvalCode"",""symbolLocation"":139,""imageIndex"":12},{""imageOffset"":1082770,""symbol"":""builtin_exec"",""symbolLocation"":626,""imageIndex"":12},{""imageOffset"":501866,""symbol"":""cfunction_vectorcall_FASTCALL"",""symbolLocation"":218,""imageIndex"":12},{""imageOffset"":1131916,""symbol"":""call_function"",""symbolLocation"":732,""imageIndex"":12},{""imageOffset"":1121099,""symbol"":""_PyEval_EvalFrameDefault"",""symbolLocation"":25371,""imageIndex"":12},{""imageOffset"":1135235,""symbol"":""_PyEval_EvalCode"",""symbolLocation"":2611,""imageIndex"":12},{""imageOffset"":248017,""symbol"":""_PyFunction_Vectorcall"",""symbolLocation"":289,""imageIndex"":12},{""imageOffset"":1131916,""symbol"":""call_function"",""symbolLocation"":732,""imageIndex"":12},{""imageOffset"":1121099,""symbol"":""_PyEval_EvalFrameDefault"",""symbolLocation"":25371,""imageIndex"":12},{""imageOffset"":1135235,""symbol"":""_PyEval_EvalCode"",""symbolLocation"":2611,""imageIndex"":12},{""imageOffset"":248017,""symbol"":""_PyFunction_Vectorcall"",""symbolLocation"":289,""imageIndex"":12},{""imageOffset"":1551904,""symbol"":""pymain_run_module"",""symbolLocation"":208,""imageIndex"":12},{""imageOffset"":1549623,""symbol"":""Py_RunMain"",""symbolLocation"":1431,""imageIndex"":12},{""imageOffset"":1551167,""symbol"":""pymain_main"",""symbolLocation"":223,""imageIndex"":12},{""imageOffset"":1550923,""symbol"":""Py_Main"",""symbolLocation"":43,""imageIndex"":12},{""imageOffset"":3528,""symbol"":""main"",""symbolLocation"":120,""imageIndex"":13},{""imageOffset"":21806,""symbol"":""start"",""symbolLocation"":462,""imageIndex"":14}]},{""id"":127266336,""name"":""com.apple.rosetta.exceptionserver"",""frames"":[{""imageOffset"":18756,""imageIndex"":15},{""imageOffset"":74720,""imageIndex"":15},{""imageOffset"":81496,""imageIndex"":15}]},{""id"":127267145,""name"":""ThreadPoolServiceThread"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":43210,""symbol"":""kevent64"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":45272682,""symbol"":""base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*)"",""symbolLocation"":330,""imageIndex"":16},{""imageOffset"":45272263,""symbol"":""base::MessagePumpKqueue::Run(base::MessagePump::Delegate*)"",""symbolLocation"":167,""imageIndex"":16},{""imageOffset"":44783147,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta)"",""symbolLocation"":139,""imageIndex"":16},{""imageOffset"":44537803,""symbol"":""base::RunLoop::Run()"",""symbolLocation"":395,""imageIndex"":16},{""imageOffset"":44829332,""symbol"":""base::internal::ServiceThread::Run(base::RunLoop*)"",""symbolLocation"":20,""imageIndex"":16},{""imageOffset"":44911229,""symbol"":""base::Thread::ThreadMain()"",""symbolLocation"":413,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267147,""name"":""ThreadPoolBackgroundWorker"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":44869496,""symbol"":""base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*)"",""symbolLocation"":56,""imageIndex"":16},{""imageOffset"":44872016,""symbol"":""base::internal::WorkerThread::RunWorker()"",""symbolLocation"":1024,""imageIndex"":16},{""imageOffset"":44870724,""symbol"":""base::internal::WorkerThread::RunBackgroundPooledWorker()"",""symbolLocation"":20,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267148,""name"":""Chrome_IOThread"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":43210,""symbol"":""kevent64"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":45272682,""symbol"":""base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*)"",""symbolLocation"":330,""imageIndex"":16},{""imageOffset"":45272263,""symbol"":""base::MessagePumpKqueue::Run(base::MessagePump::Delegate*)"",""symbolLocation"":167,""imageIndex"":16},{""imageOffset"":44783147,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta)"",""symbolLocation"":139,""imageIndex"":16},{""imageOffset"":44537803,""symbol"":""base::RunLoop::Run()"",""symbolLocation"":395,""imageIndex"":16},{""imageOffset"":111124230,""symbol"":""content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*)"",""symbolLocation"":102,""imageIndex"":16},{""imageOffset"":44911229,""symbol"":""base::Thread::ThreadMain()"",""symbolLocation"":413,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267149,""name"":""NetworkConfigWatcher"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":45228751,""symbol"":""base::WaitableEvent::Wait()"",""symbolLocation"":31,""imageIndex"":16},{""imageOffset"":44343771,""symbol"":""base::MessagePumpDefault::Run(base::MessagePump::Delegate*)"",""symbolLocation"":171,""imageIndex"":16},{""imageOffset"":44783147,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta)"",""symbolLocation"":139,""imageIndex"":16},{""imageOffset"":44537803,""symbol"":""base::RunLoop::Run()"",""symbolLocation"":395,""imageIndex"":16},{""imageOffset"":44911229,""symbol"":""base::Thread::ThreadMain()"",""symbolLocation"":413,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267150,""name"":""ThreadPoolForegroundWorker"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":44869496,""symbol"":""base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*)"",""symbolLocation"":56,""imageIndex"":16},{""imageOffset"":44872016,""symbol"":""base::internal::WorkerThread::RunWorker()"",""symbolLocation"":1024,""imageIndex"":16},{""imageOffset"":44870868,""symbol"":""base::internal::WorkerThread::RunPooledWorker()"",""symbolLocation"":20,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267153,""name"":""CompositorTileWorker1"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":45194776,""symbol"":""base::ConditionVariable::Wait()"",""symbolLocation"":104,""imageIndex"":16},{""imageOffset"":64820728,""symbol"":""non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run()"",""symbolLocation"":56,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267154,""name"":""Chrome_InProcGpuThread"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":11116,""symbol"":""io_connect_method"",""symbolLocation"":387,""imageIndex"":17},{""imageOffset"":10675,""symbol"":""IOConnectCallMethod"",""symbolLocation"":244,""imageIndex"":17},{""imageOffset"":10941,""symbol"":""IOSurfaceClientSetValue"",""symbolLocation"":591,""imageIndex"":18},{""imageOffset"":50955558,""symbol"":""gl::GLImageIOSurface::SetColorSpace(gfx::ColorSpace const&)"",""symbolLocation"":86,""imageIndex"":16},{""imageOffset"":74637595,""symbol"":""gpu::SharedImageBackingFactoryGLTexture::CreateSharedImageInternal(gpu::Mailbox const&, viz::ResourceFormat, unsigned long long, gfx::Size const&, gfx::ColorSpace const&, unsigned int, base::span)"",""symbolLocation"":1419,""imageIndex"":16},{""imageOffset"":74636132,""symbol"":""gpu::SharedImageBackingFactoryGLTexture::CreateSharedImage(gpu::Mailbox const&, viz::ResourceFormat, unsigned long long, gfx::Size const&, gfx::ColorSpace const&, unsigned int, bool)"",""symbolLocation"":68,""imageIndex"":16},{""imageOffset"":74648644,""symbol"":""gpu::SharedImageFactory::CreateSharedImage(gpu::Mailbox const&, viz::ResourceFormat, gfx::Size const&, gfx::ColorSpace const&, unsigned long long, unsigned int)"",""symbolLocation"":132,""imageIndex"":16},{""imageOffset"":75608643,""symbol"":""gpu::SharedImageStub::OnCreateSharedImage(GpuChannelMsg_CreateSharedImage_Params const&)"",""symbolLocation"":115,""imageIndex"":16},{""imageOffset"":75608329,""symbol"":""bool IPC::MessageT, void>::Dispatch(IPC::Message const*, gpu::SharedImageStub*, gpu::SharedImageStub*, void*, void (gpu::SharedImageStub::*)(GpuChannelMsg_CreateSharedImage_Params const&))"",""symbolLocation"":137,""imageIndex"":16},{""imageOffset"":75607760,""symbol"":""gpu::SharedImageStub::OnMessageReceived(IPC::Message const&)"",""symbolLocation"":96,""imageIndex"":16},{""imageOffset"":75534028,""symbol"":""gpu::GpuChannel::HandleMessage(IPC::Message const&)"",""symbolLocation"":188,""imageIndex"":16},{""imageOffset"":67573294,""symbol"":""gpu::Scheduler::RunNextTask()"",""symbolLocation"":878,""imageIndex"":16},{""imageOffset"":44698991,""symbol"":""base::TaskAnnotator::RunTask(char const*, base::PendingTask*)"",""symbolLocation"":255,""imageIndex"":16},{""imageOffset"":44781718,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::DoWorkImpl(base::sequence_manager::LazyNow*, bool*)"",""symbolLocation"":374,""imageIndex"":16},{""imageOffset"":44781060,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::DoWork()"",""symbolLocation"":132,""imageIndex"":16},{""imageOffset"":44343679,""symbol"":""base::MessagePumpDefault::Run(base::MessagePump::Delegate*)"",""symbolLocation"":79,""imageIndex"":16},{""imageOffset"":44783147,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta)"",""symbolLocation"":139,""imageIndex"":16},{""imageOffset"":44537803,""symbol"":""base::RunLoop::Run()"",""symbolLocation"":395,""imageIndex"":16},{""imageOffset"":44911229,""symbol"":""base::Thread::ThreadMain()"",""symbolLocation"":413,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267155,""name"":""Chrome_ChildIOThread"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":43210,""symbol"":""kevent64"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":45272682,""symbol"":""base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*)"",""symbolLocation"":330,""imageIndex"":16},{""imageOffset"":45272263,""symbol"":""base::MessagePumpKqueue::Run(base::MessagePump::Delegate*)"",""symbolLocation"":167,""imageIndex"":16},{""imageOffset"":44783147,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta)"",""symbolLocation"":139,""imageIndex"":16},{""imageOffset"":44537803,""symbol"":""base::RunLoop::Run()"",""symbolLocation"":395,""imageIndex"":16},{""imageOffset"":44911229,""symbol"":""base::Thread::ThreadMain()"",""symbolLocation"":413,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267156,""name"":""VizCompositorThread"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":44343823,""symbol"":""base::MessagePumpDefault::Run(base::MessagePump::Delegate*)"",""symbolLocation"":223,""imageIndex"":16},{""imageOffset"":44783147,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta)"",""symbolLocation"":139,""imageIndex"":16},{""imageOffset"":44537803,""symbol"":""base::RunLoop::Run()"",""symbolLocation"":395,""imageIndex"":16},{""imageOffset"":44911229,""symbol"":""base::Thread::ThreadMain()"",""symbolLocation"":413,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267157,""name"":""NetworkConfigWatcher"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":45228751,""symbol"":""base::WaitableEvent::Wait()"",""symbolLocation"":31,""imageIndex"":16},{""imageOffset"":44343771,""symbol"":""base::MessagePumpDefault::Run(base::MessagePump::Delegate*)"",""symbolLocation"":171,""imageIndex"":16},{""imageOffset"":44783147,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta)"",""symbolLocation"":139,""imageIndex"":16},{""imageOffset"":44537803,""symbol"":""base::RunLoop::Run()"",""symbolLocation"":395,""imageIndex"":16},{""imageOffset"":44911229,""symbol"":""base::Thread::ThreadMain()"",""symbolLocation"":413,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267182,""name"":""ThreadPoolSingleThreadForegroundBlocking0"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":45228751,""symbol"":""base::WaitableEvent::Wait()"",""symbolLocation"":31,""imageIndex"":16},{""imageOffset"":44869482,""symbol"":""base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*)"",""symbolLocation"":42,""imageIndex"":16},{""imageOffset"":44872016,""symbol"":""base::internal::WorkerThread::RunWorker()"",""symbolLocation"":1024,""imageIndex"":16},{""imageOffset"":44870964,""symbol"":""base::internal::WorkerThread::RunDedicatedWorker()"",""symbolLocation"":20,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267183,""name"":""NetworkConfigWatcher"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":45228751,""symbol"":""base::WaitableEvent::Wait()"",""symbolLocation"":31,""imageIndex"":16},{""imageOffset"":44343771,""symbol"":""base::MessagePumpDefault::Run(base::MessagePump::Delegate*)"",""symbolLocation"":171,""imageIndex"":16},{""imageOffset"":44783147,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta)"",""symbolLocation"":139,""imageIndex"":16},{""imageOffset"":44537803,""symbol"":""base::RunLoop::Run()"",""symbolLocation"":395,""imageIndex"":16},{""imageOffset"":44911229,""symbol"":""base::Thread::ThreadMain()"",""symbolLocation"":413,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267213,""name"":""MemoryInfra"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":45228751,""symbol"":""base::WaitableEvent::Wait()"",""symbolLocation"":31,""imageIndex"":16},{""imageOffset"":44343771,""symbol"":""base::MessagePumpDefault::Run(base::MessagePump::Delegate*)"",""symbolLocation"":171,""imageIndex"":16},{""imageOffset"":44783147,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta)"",""symbolLocation"":139,""imageIndex"":16},{""imageOffset"":44537803,""symbol"":""base::RunLoop::Run()"",""symbolLocation"":395,""imageIndex"":16},{""imageOffset"":44911229,""symbol"":""base::Thread::ThreadMain()"",""symbolLocation"":413,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267237,""name"":""NetworkConfigWatcher"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":45228751,""symbol"":""base::WaitableEvent::Wait()"",""symbolLocation"":31,""imageIndex"":16},{""imageOffset"":44343771,""symbol"":""base::MessagePumpDefault::Run(base::MessagePump::Delegate*)"",""symbolLocation"":171,""imageIndex"":16},{""imageOffset"":44783147,""symbol"":""base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta)"",""symbolLocation"":139,""imageIndex"":16},{""imageOffset"":44537803,""symbol"":""base::RunLoop::Run()"",""symbolLocation"":395,""imageIndex"":16},{""imageOffset"":44911229,""symbol"":""base::Thread::ThreadMain()"",""symbolLocation"":413,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127267544,""name"":""ThreadPoolSingleThreadSharedBackgroundBlocking1"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":45228751,""symbol"":""base::WaitableEvent::Wait()"",""symbolLocation"":31,""imageIndex"":16},{""imageOffset"":44869482,""symbol"":""base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*)"",""symbolLocation"":42,""imageIndex"":16},{""imageOffset"":44871229,""symbol"":""base::internal::WorkerThread::RunWorker()"",""symbolLocation"":237,""imageIndex"":16},{""imageOffset"":44870772,""symbol"":""base::internal::WorkerThread::RunBackgroundSharedWorker()"",""symbolLocation"":20,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127382442,""name"":""com.apple.NSEventThread"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":521568,""symbol"":""__CFRunLoopServiceMachPort"",""symbolLocation"":319,""imageIndex"":9},{""imageOffset"":515056,""symbol"":""__CFRunLoopRun"",""symbolLocation"":1276,""imageIndex"":9},{""imageOffset"":512052,""symbol"":""CFRunLoopRunSpecific"",""symbolLocation"":562,""imageIndex"":9},{""imageOffset"":1755598,""symbol"":""_NSEventThread"",""symbolLocation"":132,""imageIndex"":11},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127384095,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3377823,""symbol"":""blas_thread_server"",""symbolLocation"":207,""imageIndex"":19},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127384096,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3377823,""symbol"":""blas_thread_server"",""symbolLocation"":207,""imageIndex"":19},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127384097,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3377823,""symbol"":""blas_thread_server"",""symbolLocation"":207,""imageIndex"":19},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127384098,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3377823,""symbol"":""blas_thread_server"",""symbolLocation"":207,""imageIndex"":19},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127384099,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3377823,""symbol"":""blas_thread_server"",""symbolLocation"":207,""imageIndex"":19},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127384100,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3377823,""symbol"":""blas_thread_server"",""symbolLocation"":207,""imageIndex"":19},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127384101,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3377823,""symbol"":""blas_thread_server"",""symbolLocation"":207,""imageIndex"":19},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521733,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":126947,""symbol"":""th_worker(void*)"",""symbolLocation"":115,""imageIndex"":20},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521734,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":126947,""symbol"":""th_worker(void*)"",""symbolLocation"":115,""imageIndex"":20},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521735,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":126947,""symbol"":""th_worker(void*)"",""symbolLocation"":115,""imageIndex"":20},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521736,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":126947,""symbol"":""th_worker(void*)"",""symbolLocation"":115,""imageIndex"":20},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521737,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":126947,""symbol"":""th_worker(void*)"",""symbolLocation"":115,""imageIndex"":20},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521738,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":126947,""symbol"":""th_worker(void*)"",""symbolLocation"":115,""imageIndex"":20},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521739,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":126947,""symbol"":""th_worker(void*)"",""symbolLocation"":115,""imageIndex"":20},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521740,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":126947,""symbol"":""th_worker(void*)"",""symbolLocation"":115,""imageIndex"":20},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521746,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3379947,""symbol"":""blas_thread_server"",""symbolLocation"":619,""imageIndex"":21},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521747,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3379947,""symbol"":""blas_thread_server"",""symbolLocation"":619,""imageIndex"":21},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521748,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3379947,""symbol"":""blas_thread_server"",""symbolLocation"":619,""imageIndex"":21},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521749,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3379947,""symbol"":""blas_thread_server"",""symbolLocation"":619,""imageIndex"":21},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521750,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3379947,""symbol"":""blas_thread_server"",""symbolLocation"":619,""imageIndex"":21},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521751,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3379947,""symbol"":""blas_thread_server"",""symbolLocation"":619,""imageIndex"":21},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127521752,""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":17386,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":27247,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1249,""imageIndex"":2},{""imageOffset"":3379947,""symbol"":""blas_thread_server"",""symbolLocation"":619,""imageIndex"":21},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127658388,""frames"":[{""imageOffset"":141332,""imageIndex"":15}]},{""id"":127701361,""frames"":[{""imageOffset"":141332,""imageIndex"":15}]},{""id"":127703301,""frames"":[{""imageOffset"":141332,""imageIndex"":15}]},{""id"":127703302,""frames"":[{""imageOffset"":141332,""imageIndex"":15}]},{""id"":127703303,""frames"":[{""imageOffset"":18804,""imageIndex"":15},{""imageOffset"":88692,""imageIndex"":15},{""imageOffset"":90376,""imageIndex"":15},{""imageOffset"":141420,""imageIndex"":15}]},{""id"":127703304,""frames"":[{""imageOffset"":141332,""imageIndex"":15}]},{""id"":127703305,""frames"":[{""imageOffset"":141332,""imageIndex"":15}]},{""id"":127703309,""frames"":[{""imageOffset"":141332,""imageIndex"":15}]},{""id"":127703310,""frames"":[{""imageOffset"":18492,""imageIndex"":15},{""imageOffset"":88672,""imageIndex"":15},{""imageOffset"":90376,""imageIndex"":15},{""imageOffset"":141420,""imageIndex"":15}]},{""id"":127703311,""frames"":[{""imageOffset"":141332,""imageIndex"":15}]},{""id"":127703325,""frames"":[{""imageOffset"":141332,""imageIndex"":15}]},{""id"":127704473,""name"":""ThreadPoolForegroundWorker"",""frames"":[{""imageOffset"":140705601677632,""imageIndex"":0},{""imageOffset"":6522,""symbol"":""mach_msg_trap"",""symbolLocation"":10,""imageIndex"":1},{""imageOffset"":7400,""symbol"":""mach_msg"",""symbolLocation"":56,""imageIndex"":1},{""imageOffset"":45229202,""symbol"":""base::WaitableEvent::TimedWait(base::TimeDelta const&)"",""symbolLocation"":434,""imageIndex"":16},{""imageOffset"":44869496,""symbol"":""base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*)"",""symbolLocation"":56,""imageIndex"":16},{""imageOffset"":44871229,""symbol"":""base::internal::WorkerThread::RunWorker()"",""symbolLocation"":237,""imageIndex"":16},{""imageOffset"":44870868,""symbol"":""base::internal::WorkerThread::RunPooledWorker()"",""symbolLocation"":20,""imageIndex"":16},{""imageOffset"":45211143,""symbol"":""base::(anonymous namespace)::ThreadFunc(void*)"",""symbolLocation"":87,""imageIndex"":16},{""imageOffset"":25825,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":2},{""imageOffset"":8043,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":2}]},{""id"":127707361,""frames"":[{""imageOffset"":141332,""imageIndex"":15}]}], ""usedImages"" : [ { ""size"" : 0, ""source"" : ""A"", ""base"" : 0, ""uuid"" : ""00000000-0000-0000-0000-000000000000"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 140703180697600, ""size"" : 229376, ""uuid"" : ""792406fe-2224-3c14-ba9f-f076fd7839d2"", ""path"" : ""\/usr\/lib\/system\/libsystem_kernel.dylib"", ""name"" : ""libsystem_kernel.dylib"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 140703180926976, ""size"" : 49152, ""uuid"" : ""f32b6d06-b156-3da0-b086-a31cf011362b"", ""path"" : ""\/usr\/lib\/system\/libsystem_pthread.dylib"", ""name"" : ""libsystem_pthread.dylib"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 140703179681792, ""size"" : 561152, ""uuid"" : ""e8499aa8-6800-372f-bd48-82846d88c6cb"", ""path"" : ""\/usr\/lib\/system\/libsystem_c.dylib"", ""name"" : ""libsystem_c.dylib"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 140703181025280, ""size"" : 40960, ""uuid"" : ""bd2bd848-f9c9-35ff-9795-32d31977523d"", ""path"" : ""\/usr\/lib\/system\/libsystem_platform.dylib"", ""name"" : ""libsystem_platform.dylib"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 5011021824, ""size"" : 4485120, ""uuid"" : ""b432d666-dcab-320a-8496-78a67f554c0e"", ""path"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt5\/Qt\/lib\/QtWidgets.framework\/Versions\/5\/QtWidgets"", ""name"" : ""QtWidgets"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 4997767168, ""size"" : 2691072, ""uuid"" : ""259274fb-9944-3b14-95c0-acb6f7b3f7d7"", ""path"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt5\/QtWidgets.abi3.so"", ""name"" : ""QtWidgets.abi3.so"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 4953436160, ""size"" : 5705728, ""uuid"" : ""c723812a-f7a5-3001-98d5-e60e8daa6ffb"", ""path"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt5\/Qt\/lib\/QtCore.framework\/Versions\/5\/QtCore"", ""name"" : ""QtCore"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 5079498752, ""size"" : 1503232, ""uuid"" : ""d4ab240b-4535-3aec-b72b-5ffc4750e4e5"", ""path"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt5\/Qt\/plugins\/platforms\/libqcocoa.dylib"", ""name"" : ""libqcocoa.dylib"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 140703181242368, ""CFBundleShortVersionString"" : ""6.9"", ""CFBundleIdentifier"" : ""com.apple.CoreFoundation"", ""size"" : 5246976, ""uuid"" : ""32d2d187-4e52-376e-bc07-245a48c37e2b"", ""path"" : ""\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation"", ""name"" : ""CoreFoundation"", ""CFBundleVersion"" : ""1866"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 140703333724160, ""CFBundleShortVersionString"" : ""2.1.1"", ""CFBundleIdentifier"" : ""com.apple.HIToolbox"", ""size"" : 3096576, ""uuid"" : ""95eab511-8fc1-353a-ac8a-26aa19032e2e"", ""path"" : ""\/System\/Library\/Frameworks\/Carbon.framework\/Versions\/A\/Frameworks\/HIToolbox.framework\/Versions\/A\/HIToolbox"", ""name"" : ""HIToolbox"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 140703224950784, ""CFBundleShortVersionString"" : ""6.9"", ""CFBundleIdentifier"" : ""com.apple.AppKit"", ""size"" : 15269888, ""uuid"" : ""bcb46e9b-acd5-3b26-878f-a3988bc5df7e"", ""path"" : ""\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit"", ""name"" : ""AppKit"", ""CFBundleVersion"" : ""2113.60.148"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 4520992768, ""CFBundleShortVersionString"" : ""3.9.6, (c) 2001-2019 Python Software Foundation."", ""CFBundleIdentifier"" : ""org.python.python"", ""size"" : 2510848, ""uuid"" : ""7fdc4a6b-e70b-3c9e-a72e-cd15ddf0d90f"", ""path"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/Python"", ""name"" : ""Python"", ""CFBundleVersion"" : ""3.9.6"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 4376481792, ""CFBundleShortVersionString"" : ""1.3.0"", ""CFBundleIdentifier"" : ""edu.ucsf.cgl.ChimeraX"", ""size"" : 4096, ""uuid"" : ""9596eff5-d2be-396c-9c4e-6177235c3dae"", ""path"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/MacOS\/ChimeraX"", ""name"" : ""ChimeraX"", ""CFBundleVersion"" : ""1.3.0.0"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 8675491840, ""size"" : 442368, ""uuid"" : ""f71fb3ca-5fcc-3577-9457-b047888a46d1"", ""path"" : ""\/usr\/lib\/dyld"", ""name"" : ""dyld"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 140703126949888, ""size"" : 196608, ""uuid"" : ""ef33add1-6b70-3cc9-8bbc-c8544b609d2b"", ""path"" : ""\/usr\/libexec\/rosetta\/runtime"", ""name"" : ""runtime"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 5253427200, ""size"" : 131002368, ""uuid"" : ""86651daf-3bff-3a6f-b313-e84d303e55eb"", ""path"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt5\/Qt\/lib\/QtWebEngineCore.framework\/Versions\/5\/QtWebEngineCore"", ""name"" : ""QtWebEngineCore"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 140703223820288, ""CFBundleShortVersionString"" : ""2.0.2"", ""CFBundleIdentifier"" : ""com.apple.framework.IOKit"", ""size"" : 745472, ""uuid"" : ""e9f24202-6a37-30c2-8431-8ba7cc02812f"", ""path"" : ""\/System\/Library\/Frameworks\/IOKit.framework\/Versions\/A\/IOKit"", ""name"" : ""IOKit"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 140703329808384, ""CFBundleShortVersionString"" : ""302.14"", ""CFBundleIdentifier"" : ""com.apple.IOSurface"", ""size"" : 73728, ""uuid"" : ""1c5ffd82-a53d-384e-970f-9d904b1e9c63"", ""path"" : ""\/System\/Library\/Frameworks\/IOSurface.framework\/Versions\/A\/IOSurface"", ""name"" : ""IOSurface"", ""CFBundleVersion"" : ""302.14"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 4610883584, ""size"" : 62603264, ""uuid"" : ""9112000d-375c-34f0-9a66-9d68f91a12cd"", ""path"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/numpy\/.dylibs\/libopenblas.0.dylib"", ""name"" : ""libopenblas.0.dylib"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 6998147072, ""size"" : 147456, ""uuid"" : ""c77aa6bd-464f-397d-9361-6e5f3450a851"", ""path"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/numexpr\/interpreter.cpython-39-darwin.so"", ""name"" : ""interpreter.cpython-39-darwin.so"" }, { ""source"" : ""P"", ""arch"" : ""x86_64"", ""base"" : 7504543744, ""size"" : 61087744, ""uuid"" : ""6286b1a0-1fc3-3620-a830-7af7902ead7f"", ""path"" : ""\/Applications\/ChimeraX-1.3.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/scipy\/.dylibs\/libopenblas.0.dylib"", ""name"" : ""libopenblas.0.dylib"" } ], ""sharedCache"" : { ""base"" : 140703177670656, ""size"" : 19331678208, ""uuid"" : ""f3387257-f96f-3907-b94c-1d7f0ebef98b"" }, ""vmSummary"" : ""ReadOnly portion of Libraries: Total=1.6G resident=0K(0%) swapped_out_or_unallocated=1.6G(100%)\nWritable regions: Total=5.3G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=5.3G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nAccelerate framework 384K 3 \nActivity Tracing 256K 1 \nCG backing stores 8064K 8 \nCG image 284K 51 \nColorSync 232K 28 \nCoreAnimation 172K 16 \nCoreGraphics 16K 3 \nCoreUI image data 3404K 25 \nFoundation 16K 1 \nKernel Alloc Once 8K 1 \nMALLOC 3.4G 188 \nMALLOC guard page 192K 8 \nMALLOC_MEDIUM (reserved) 680.0M 8 reserved VM address space (unallocated)\nMALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)\nMach message 24K 6 \nOpenGL GLSL 256K 3 \nRosetta Arena 4096K 2 \nRosetta Generic 2644K 658 \nRosetta IndirectBranch 2048K 1 \nRosetta JIT 128.0M 1 \nRosetta Return Stack 940K 94 \nRosetta Thread Context 940K 94 \nSTACK GUARD 48K 12 \nStack 153.8M 52 \nStack Guard 56.2M 40 \nVM_ALLOCATE 272.9M 337 \nVM_ALLOCATE (reserved) 96.0M 7 reserved VM address space (unallocated)\n__CTF 756 1 \n__DATA 48.7M 850 \n__DATA_CONST 31.0M 338 \n__DATA_DIRTY 1645K 215 \n__FONT_DATA 4K 1 \n__GLSLBUILTINS 5176K 1 \n__LINKEDIT 813.4M 278 \n__OBJC_RO 82.8M 1 \n__OBJC_RW 3200K 2 \n__TEXT 861.3M 800 \n__UNICODE 592K 1 \ndyld private memory 1024K 1 \nmapped file 5.5G 1112 \nshared memory 828K 20 \nunshared pmap 12.6M 8 \n=========== ======= ======= \nTOTAL 12.5G 5278 \nTOTAL, minus reserved VM space 11.4G 5278 \n"", ""legacyInfo"" : { ""threadTriggered"" : { ""name"" : ""CrBrowserMain"", ""queue"" : ""com.apple.main-thread"" } }, ""trialInfo"" : { ""rollouts"" : [ { ""rolloutId"" : ""60f8ddccefea4203d95cbeef"", ""factorPackIds"" : { }, ""deploymentId"" : 240000025 }, { ""rolloutId"" : ""60186475825c62000ccf5450"", ""factorPackIds"" : { }, ""deploymentId"" : 240000026 } ], ""experiments"" : [ { ""treatmentId"" : ""6dd670af-0633-45e4-ae5f-122ae4df02be"", ""experimentId"" : ""64406ba83deb637ac8a04419"", ""deploymentId"" : 900000005 }, { ""treatmentId"" : ""c28e4ee6-1b08-4f90-8e05-2809e78310a3"", ""experimentId"" : ""6317d2003d24842ff850182a"", ""deploymentId"" : 400000013 } ] } } ===== Log before crash start ===== UCSF ChimeraX version: 1.3 (2021-12-08) © 2016-2021 Regents of the University of California. All rights reserved. > open > /Users/bram_1/Documents/ChimeraSessions_and_PDBs/Candida_Spc72_CM1/analysingcrosslinks.cxs Log from Tue May 23 16:40:28 2023UCSF ChimeraX version: 1.3 (2021-12-08) © 2016-2021 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open > /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/Model_building/relion_locres_filtered_correcthandedness.mrc Opened relion_locres_filtered_correcthandedness.mrc as #1, grid size 512,512,512, pixel 1.07, shown at level 0.00797, step 2, values float32 > open /Users/bram_1/Downloads/AF-A0A1D8PTZ8-F1-model_v4.pdb Summary of feedback from opening /Users/bram_1/Downloads/AF-A0A1D8PTZ8-F1-model_v4.pdb --- warning | Ignored bad PDB record found on line 39 DBREF XXXX A 1 924 UNP A0A1D8PTZ8 A0A1D8PTZ8_CANAL 1 924 AF-A0A1D8PTZ8-F1-model_v4.pdb title: Alphafold monomer V2.0 prediction for uncharacterized protein (A0A1D8PTZ8) [more info...] Chain information for AF-A0A1D8PTZ8-F1-model_v4.pdb #2 --- Chain | Description A | uncharacterized protein > open /Users/bram_1/Downloads/AF-Q5AGV5-F1-model_v4.pdb AF-Q5AGV5-F1-model_v4.pdb title: Alphafold monomer V2.0 prediction for uncharacterized protein (Q5AGV5) [more info...] Chain information for AF-Q5AGV5-F1-model_v4.pdb #3 --- Chain | Description | UniProt A | uncharacterized protein | Q5AGV5_CANAL > ui mousemode right ""rotate selected models"" > ui mousemode right ""translate selected models"" > select #2 7107 atoms, 7206 bonds, 924 residues, 1 model selected > select clear Drag select of 1930 residues > view matrix models > #2,1,0,0,277.73,0,1,0,373.35,0,0,1,151.33,#3,1,0,0,277.73,0,1,0,373.35,0,0,1,151.33 > select #3 8143 atoms, 8240 bonds, 1006 residues, 1 model selected Drag select of 41 residues > view matrix models > #2,1,0,0,278.77,0,1,0,373.73,0,0,1,153.12,#3,1,0,0,278.77,0,1,0,373.73,0,0,1,153.12 > select clear > select #3 8143 atoms, 8240 bonds, 1006 residues, 1 model selected > view matrix models #3,1,0,0,347.44,0,1,0,371.06,0,0,1,304.16 > select clear > open > /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/Model_building/ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6.pdb Chain information for ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6.pdb #4 --- Chain | Description A | No description available B | No description available C | No description available D | No description available E | No description available F | No description available > open > /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/Model_building/ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb Chain information for ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #5 --- Chain | Description A | No description available B | No description available C | No description available D | No description available E | No description available F | No description available > open > /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/Model_building/ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb Chain information for ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #6 --- Chain | Description A | No description available B | No description available C | No description available D | No description available E | No description available F | No description available > select #5 18332 atoms, 18685 bonds, 16 pseudobonds, 2245 residues, 2 models selected > view matrix models #5,1,0,0,-30.62,0,1,0,-20.768,0,0,1,-93.434 > fitmap #5 inMap #1 Fit molecule ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb (#5) to map relion_locres_filtered_correcthandedness.mrc (#1) using 18332 atoms average map value = 0.02539, steps = 428 shifted from previous position = 22.7 rotated from previous position = 55.5 degrees atoms outside contour = 1429, contour level = 0.0079731 Position of ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb (#5) relative to relion_locres_filtered_correcthandedness.mrc (#1) coordinates: Matrix rotation and translation 0.88678512 -0.45979150 0.04694587 118.00662024 0.26819206 0.59464114 0.75794125 -203.20672829 -0.37641089 -0.65954052 0.65063135 303.84489223 Axis -0.85972026 0.25677113 0.44153105 Axis point 0.00000000 261.20494053 401.20296012 Rotation angle (degrees) 55.52623624 Shift along axis -19.47334687 > select #6 18332 atoms, 18685 bonds, 16 pseudobonds, 2245 residues, 2 models selected > view matrix models #6,1,0,0,37.65,0,1,0,-21.416,0,0,1,109.99 > fitmap #6 inMap #1 Fit molecule ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb (#6) to map relion_locres_filtered_correcthandedness.mrc (#1) using 18332 atoms average map value = 0.02699, steps = 480 shifted from previous position = 53.2 rotated from previous position = 55.5 degrees atoms outside contour = 1278, contour level = 0.0079731 Position of ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb (#6) relative to relion_locres_filtered_correcthandedness.mrc (#1) coordinates: Matrix rotation and translation 0.88699567 0.26763785 -0.37630926 64.24733202 -0.45934136 0.59497451 -0.65955352 375.32066495 0.04737293 0.75787552 0.65067695 -49.31136068 Axis 0.85989947 -0.25703162 -0.44103021 Axis point 0.00000000 261.24509907 401.03491506 Rotation angle (degrees) 55.50574727 Shift along axis -19.47523374 > hide #!1 models > show sel cartoons > hide sel atoms Drag select of 4175 residues, 55042 atoms, 47 pseudobonds > hide sel atoms > show sel cartoons > select clear > color /F deep pink > color /E deep pink > color /B orange > color /A gold > color /D cornflower blue > color /C aquamarine > select clear > select #3/A:664 8 atoms, 7 bonds, 1 residue, 1 model selected > select up 1026 atoms, 1031 bonds, 125 residues, 1 model selected > select up 8143 atoms, 8240 bonds, 1006 residues, 1 model selected > color sel deep pink > select clear [Repeated 1 time(s)] > select #2/A:99 8 atoms, 7 bonds, 1 residue, 1 model selected > select up 62 atoms, 61 bonds, 9 residues, 1 model selected > select up 7107 atoms, 7206 bonds, 924 residues, 1 model selected > color sel white > select clear > close #1 > combine #2-6 Remapping chain ID 'A' in AF-Q5AGV5-F1-model_v4.pdb #3 to 'B' Remapping chain ID 'A' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6.pdb #4 to 'G' Remapping chain ID 'B' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6.pdb #4 to 'H' Remapping chain ID 'A' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #5 to 'I' Remapping chain ID 'B' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #5 to 'J' Remapping chain ID 'C' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #5 to 'K' Remapping chain ID 'D' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #5 to 'L' Remapping chain ID 'E' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #5 to 'M' Remapping chain ID 'F' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #5 to 'N' Remapping chain ID 'A' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #6 to 'O' Remapping chain ID 'B' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #6 to 'P' Remapping chain ID 'C' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #6 to 'Q' Remapping chain ID 'D' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #6 to 'R' Remapping chain ID 'E' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #6 to 'S' Remapping chain ID 'F' in ISOLDEafterRealSpaceRefine46_twodihedraloutliersfixedbycoot_angleoutliersfixedbycoot_pluscablam_ISOLDEfixedallfromchecklist_cootfixedbondlengthangleoutliers_round6_nohydrogens.pdb #6 to 'T' > close #2-3#4-6 > save > /Users/bram_1/Documents/ChimeraSessions_and_PDBs/Candida_Spc72_CM1/analysingcrosslinks.cxs ——— End of log from Tue May 23 16:40:28 2023 ——— opened ChimeraX session > ui tool show XMAS Traceback (most recent call last): File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/pandas/core/indexes/base.py"", line 3652, in get_loc return self._engine.get_loc(casted_key) File ""pandas/_libs/index.pyx"", line 147, in pandas._libs.index.IndexEngine.get_loc File ""pandas/_libs/index.pyx"", line 176, in pandas._libs.index.IndexEngine.get_loc File ""pandas/_libs/hashtable_class_helper.pxi"", line 7080, in pandas._libs.hashtable.PyObjectHashTable.get_item File ""pandas/_libs/hashtable_class_helper.pxi"", line 7088, in pandas._libs.hashtable.PyObjectHashTable.get_item KeyError: 'PSMID' The above exception was the direct cause of the following exception: Traceback (most recent call last): File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/chimerax/xmas/tool.py"", line 286, in function = lambda _, s=selector, t=key: self.map_button_clicked(s, File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/chimerax/xmas/tool.py"", line 444, in map_button_clicked self.map_crosslinks(self.checked_models, checked_files) File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/chimerax/xmas/tool.py"", line 457, in map_crosslinks evidence = Evidence(evidence_file) File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/chimerax/xmas/read_evidence.py"", line 37, in __init__ evidence = cls(evidence_file) File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/chimerax/xmas/read_evidence.py"", line 105, in __init__ self.engines[engine][1](df) File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/chimerax/xmas/read_evidence.py"", line 131, in parse_xlinkx_xi_seqs_scores function(peptide_pairs, df, xi_alternative) File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/chimerax/xmas/read_evidence.py"", line 218, in parse_xi_pos_ids params[key] = df[col_name].tolist() File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/pandas/core/frame.py"", line 3761, in __getitem__ indexer = self.columns.get_loc(key) File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/pandas/core/indexes/base.py"", line 3654, in get_loc raise KeyError(key) from err KeyError: 'PSMID' KeyError: 'PSMID' File ""/Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/pandas/core/indexes/base.py"", line 3654, in get_loc raise KeyError(key) from err See log for complete Python traceback. Peptide pair mapping of XlinkX evidence file: /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks.txt Unique peptide pairs: 768 out of 768 Unique peptide pairs with pseudobonds: 457 Pseudobonds are stored in /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks_1.pb Mapping information is stored in /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks_1.tsv /Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/seaborn/categorical.py:166: FutureWarning: Setting a gradient palette using color= is deprecated and will be removed in version 0.13. Set `palette='dark:gray'` for same effect. warnings.warn(msg, FutureWarning) > select clear > hide #2 models > split #1 Split combination (#1) into 20 models Chain information for combination A #1.1 --- Chain | Description A | No description available Chain information for combination B #1.2 --- Chain | Description B | No description available Chain information for combination C #1.3 --- Chain | Description C | No description available Chain information for combination D #1.4 --- Chain | Description D | No description available Chain information for combination E #1.5 --- Chain | Description E | No description available Chain information for combination F #1.6 --- Chain | Description F | No description available Chain information for combination G #1.7 --- Chain | Description G | No description available Chain information for combination H #1.8 --- Chain | Description H | No description available Chain information for combination I #1.9 --- Chain | Description I | No description available Chain information for combination J #1.10 --- Chain | Description J | No description available Chain information for combination K #1.11 --- Chain | Description K | No description available Chain information for combination L #1.12 --- Chain | Description L | No description available Chain information for combination M #1.13 --- Chain | Description M | No description available Chain information for combination N #1.14 --- Chain | Description N | No description available Chain information for combination O #1.15 --- Chain | Description O | No description available Chain information for combination P #1.16 --- Chain | Description P | No description available Chain information for combination Q #1.17 --- Chain | Description Q | No description available Chain information for combination R #1.18 --- Chain | Description R | No description available Chain information for combination S #1.19 --- Chain | Description S | No description available Chain information for combination T #1.20 --- Chain | Description T | No description available > close #2-3 Peptide pair mapping of XlinkX evidence file: /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks.txt Unique peptide pairs: 768 out of 768 Unique peptide pairs with pseudobonds: 141 Pseudobonds are stored in /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks_1.1.pb Mapping information is stored in /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks_1.1.tsv Please select pseudobonds /Users/bram_1/Library/Application Support/ChimeraX/1.3/site- packages/seaborn/categorical.py:166: FutureWarning: Setting a gradient palette using color= is deprecated and will be removed in version 0.13. Set `palette='dark:gray'` for same effect. warnings.warn(msg, FutureWarning) Distances updated in /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks_1.1.tsv Distances updated in /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks_1.1.tsv > hide #2 models > show #2 models > hide #2 models > close #3 > show #2 models Peptide pair mapping of XlinkX evidence file: /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks.txt Unique peptide pairs: 768 out of 768 Unique peptide pairs with pseudobonds: 30 Pseudobonds are stored in /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks_1.2.pb Mapping information is stored in /Users/bram_1/Documents/Papers/Candida_small_complex_Spc72_Stu2/XL- MS_solutionanalysis_byZMBHfacility/23-67_Q25070-23-67and68-XlinkX_XLonly_Crosslinks_1.2.tsv > hide #2 models ===== Log before crash end ===== Log: UCSF ChimeraX version: 1.3 (2021-12-08) © 2016-2021 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 Metal - 76.3 OpenGL renderer: Apple M1 Pro OpenGL vendor: AppleHardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro18,3 Processor Name: Unknown Processor Speed: 2,4 GHz Number of Processors: 1 Total Number of Cores: 8 L2 Cache: 16 MB Memory: 16 GB Software: System Software Overview: System Version: macOS 12.5.1 (21G83) Kernel Version: Darwin 21.6.0 Time since boot: 15 days 38 minutes Graphics/Displays: Apple M1 Pro: Chipset Model: Apple M1 Pro Type: GPU Bus: Built-In Total Number of Cores: 14 Vendor: Apple (0x106b) Metal Family: Supported, Metal GPUFamily Apple 7 Displays: U32P2WG6: Resolution: 6016 x 3384 UI Looks like: 3008 x 1692 @ 60.00Hz Main Display: Yes Mirror: Off Online: Yes Color LCD: Display Type: Built-in Liquid Retina XDR Display Resolution: 3024 x 1964 Retina Mirror: Off Online: Yes Automatically Adjust Brightness: Yes Connection Type: Internal Locale: (None, 'UTF-8') PyQt5 5.15.2, Qt 5.15.2 Installed Packages: alabaster: 0.7.12 appdirs: 1.4.4 appnope: 0.1.2 Babel: 2.9.1 backcall: 0.2.0 blockdiag: 2.0.1 certifi: 2021.5.30 cftime: 1.5.1.1 charset-normalizer: 2.0.9 ChimeraX-AddCharge: 1.2.2 ChimeraX-AddH: 2.1.11 ChimeraX-AlignmentAlgorithms: 2.0 ChimeraX-AlignmentHdrs: 3.2 ChimeraX-AlignmentMatrices: 2.0 ChimeraX-Alignments: 2.2.3 ChimeraX-AlphaFold: 1.0 ChimeraX-AltlocExplorer: 1.0.1 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.0 ChimeraX-Atomic: 1.31 ChimeraX-AtomicLibrary: 4.2 ChimeraX-AtomSearch: 2.0 ChimeraX-AtomSearchLibrary: 1.0 ChimeraX-AxesPlanes: 2.0 ChimeraX-BasicActions: 1.1 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.0 ChimeraX-BondRot: 2.0 ChimeraX-BugReporter: 1.0 ChimeraX-BuildStructure: 2.6.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.1 ChimeraX-ButtonPanel: 1.0 ChimeraX-CageBuilder: 1.0 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.2 ChimeraX-ChemGroup: 2.0 ChimeraX-Clashes: 2.2.2 ChimeraX-ColorActions: 1.0 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5 ChimeraX-CommandLine: 1.1.5 ChimeraX-ConnectStructure: 2.0 ChimeraX-Contacts: 1.0 ChimeraX-Core: 1.3 ChimeraX-CoreFormats: 1.1 ChimeraX-coulombic: 1.3.2 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0 ChimeraX-DataFormats: 1.2.2 ChimeraX-Dicom: 1.0 ChimeraX-DistMonitor: 1.1.5 ChimeraX-DistUI: 1.0 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ExperimentalCommands: 1.0 ChimeraX-FileHistory: 1.0 ChimeraX-FunctionKey: 1.0 ChimeraX-Geometry: 1.1 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1 ChimeraX-Hbonds: 2.1.2 ChimeraX-Help: 1.2 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0 ChimeraX-Label: 1.1 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.4 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.1 ChimeraX-Map: 1.1 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0 ChimeraX-MapFilter: 2.0 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1 ChimeraX-Markers: 1.0 ChimeraX-Mask: 1.0 ChimeraX-MatchMaker: 2.0.4 ChimeraX-MDcrds: 2.6 ChimeraX-MedicalToolbar: 1.0.1 ChimeraX-Meeting: 1.0 ChimeraX-MLP: 1.1 ChimeraX-mmCIF: 2.4 ChimeraX-MMTF: 2.1 ChimeraX-Modeller: 1.2.6 ChimeraX-ModelPanel: 1.2.1 ChimeraX-ModelSeries: 1.0 ChimeraX-Mol2: 2.0 ChimeraX-Morph: 1.0 ChimeraX-MouseModes: 1.1 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nucleotides: 2.0.2 ChimeraX-OpenCommand: 1.7 ChimeraX-PDB: 2.6.5 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.2 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.0.1 ChimeraX-PubChem: 2.1 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-ResidueFit: 1.0 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 2.0.1 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.4.6 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0 ChimeraX-Shortcuts: 1.1 ChimeraX-ShowAttr: 1.0 ChimeraX-ShowSequences: 1.0 ChimeraX-SideView: 1.0 ChimeraX-Smiles: 2.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.6.1 ChimeraX-STL: 1.0 ChimeraX-Storm: 1.0 ChimeraX-Struts: 1.0 ChimeraX-Surface: 1.0 ChimeraX-SwapAA: 2.0 ChimeraX-SwapRes: 2.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.1 ChimeraX-ToolshedUtils: 1.2 ChimeraX-Tug: 1.0 ChimeraX-UI: 1.13.7 ChimeraX-uniprot: 2.2 ChimeraX-UnitCell: 1.0 ChimeraX-ViewDockX: 1.0.1 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0 ChimeraX-WebServices: 1.0 ChimeraX-XMAS: 1.1.2 ChimeraX-Zone: 1.0 colorama: 0.4.4 cxservices: 1.1 cycler: 0.11.0 Cython: 0.29.24 decorator: 5.1.0 docutils: 0.17.1 et-xmlfile: 1.1.0 filelock: 3.0.12 funcparserlib: 0.3.6 grako: 3.16.5 h5py: 3.6.0 html2text: 2020.1.16 idna: 3.3 ihm: 0.21 imagecodecs: 2021.4.28 imagesize: 1.3.0 ipykernel: 5.5.5 ipython: 7.23.1 ipython-genutils: 0.2.0 jedi: 0.18.0 Jinja2: 3.0.1 jupyter-client: 6.1.12 jupyter-core: 4.9.1 kiwisolver: 1.3.2 lxml: 4.6.3 lz4: 3.1.3 MarkupSafe: 2.0.1 matplotlib: 3.4.3 matplotlib-inline: 0.1.3 msgpack: 1.0.2 netCDF4: 1.5.7 networkx: 2.6.3 numexpr: 2.8.0 numpy: 1.21.2 openpyxl: 3.1.2 openvr: 1.16.801 packaging: 21.0 pandas: 2.0.1 ParmEd: 3.2.0 parso: 0.8.3 pexpect: 4.8.0 pickleshare: 0.7.5 Pillow: 8.3.2 pip: 21.2.4 pkginfo: 1.7.1 prompt-toolkit: 3.0.23 psutil: 5.8.0 ptyprocess: 0.7.0 pycollada: 0.7.1 pydicom: 2.1.2 Pygments: 2.10.0 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 3.0.6 PyQt5-commercial: 5.15.2 PyQt5-sip: 12.8.1 PyQtWebEngine-commercial: 5.15.2 python-dateutil: 2.8.2 pytz: 2021.3 pyzmq: 22.3.0 qtconsole: 5.1.1 QtPy: 1.11.3 QtRangeSlider: 0.1.5 RandomWords: 0.3.0 requests: 2.26.0 scipy: 1.7.1 seaborn: 0.12.2 setuptools: 57.5.0 sfftk-rw: 0.7.1 six: 1.16.0 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 Sphinx: 4.2.0 sphinx-autodoc-typehints: 1.12.0 sphinxcontrib-applehelp: 1.0.2 sphinxcontrib-blockdiag: 2.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 suds-jurko: 0.6 tifffile: 2021.4.8 tinyarray: 1.2.3 tornado: 6.1 traitlets: 5.1.1 tzdata: 2023.3 urllib3: 1.26.7 wcwidth: 0.2.5 webcolors: 1.11.1 wheel: 0.37.0 wheel-filename: 1.3.0 }}} " defect closed normal Third Party fixed all ChimeraX