id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 8956 Crash in removeDockWidget chimerax-bug-report@… Eric Pettersen "{{{ The following bug report has been submitted: Platform: macOS-13.2.1-arm64-arm-64bit ChimeraX Version: 1.5 (2022-11-24 00:03:27 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. 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""rollouts"" : [ { ""rolloutId"" : ""6347054113acce15305b7b82"", ""factorPackIds"" : { ""SIRI_MEMORY_SYNC_CONFIG"" : ""634705e78e8be655c1316a6e"" }, ""deploymentId"" : 240000005 }, { ""rolloutId"" : ""610d52e1fc54bc3389840408"", ""factorPackIds"" : { ""SIRI_UNDERSTANDING_ASR_ASSISTANT"" : ""641f89df25e4504c378ef777"", ""SIRI_UNDERSTANDING_MORPHUN"" : ""62ec7220c682040ba94e6a20"" }, ""deploymentId"" : 240000674 } ], ""experiments"" : [ { ""treatmentId"" : ""c28e4ee6-1b08-4f90-8e05-2809e78310a3"", ""experimentId"" : ""6317d2003d24842ff850182a"", ""deploymentId"" : 400000013 }, { ""treatmentId"" : ""6dd670af-0633-45e4-ae5f-122ae4df02be"", ""experimentId"" : ""64406ba83deb637ac8a04419"", ""deploymentId"" : 900000005 } ] }, ""reportNotes"" : [ ""dyld_process_snapshot_create_for_process failed with 5"" ] } ===== Log before crash start ===== UCSF ChimeraX version: 1.5 (2022-11-24) © 2016-2022 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > ui tool show AlphaFold > alphafold predict > MNDQTQFTERALTILTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDLFKKVVNRNLVRIPQQQPAPAEITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIFKEAQVDIEAIKQQALELRGNTRIDSRGADTNTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDSKERQLQLIQVEIKALERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQAKKKLDELENKALDAERRYDTATAADLRYVAIPDIKKQIEKLEDQVAEEERRAGANSMIQNVVDSDTISETAARLTGIPVKKLSESEIEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEIKDKETVNVVLKKGKSRDENVPEEAEECLEVLPNHEATIGADTLGDDDNEDSMEIDDDLD Please cite ColabFold: Making protein folding accessible to all. Nature Methods (2022) if you use these predictions. Running AlphaFold prediction > open > /Users/zoechen/Downloads/ChimeraX/AlphaFold/prediction_7_I510V_NI/best_model.pdb Chain information for best_model.pdb #1 --- Chain | Description A | No description available Mismatch between Cocoa '\x0' and Carbon 'c' for virtual key 8 with QFlags(NoModifier) Mismatch between Cocoa '\x0' and Carbon 'C' for virtual key 8 with QFlags(ShiftModifier) Mismatch between Cocoa '\x0' and Carbon 'c' for virtual key 8 with QFlags(ControlModifier) Mismatch between Cocoa '\x0' and Carbon 'C' for virtual key 8 with QFlags(ShiftModifier|ControlModifier) Mismatch between Cocoa '\x0' and Carbon '\u00e7' for virtual key 8 with QFlags(AltModifier) Mismatch between Cocoa '\x0' and Carbon '\u00c7' for virtual key 8 with QFlags(ShiftModifier|AltModifier) Mismatch between Cocoa '\x0' and Carbon '\u00e7' for virtual key 8 with QFlags(ControlModifier|AltModifier) Mismatch between Cocoa '\x0' and Carbon '\u00c7' for virtual key 8 with QFlags(ShiftModifier|ControlModifier|AltModifier) Mismatch between Cocoa '\x0' and Carbon '\x3' for virtual key 8 with QFlags(MetaModifier) Mismatch between Cocoa '\x0' and Carbon '\x3' for virtual key 8 with QFlags(ShiftModifier|MetaModifier) Mismatch between Cocoa '\x0' and Carbon '\x3' for virtual key 8 with QFlags(ControlModifier|MetaModifier) Mismatch between Cocoa '\x0' and Carbon '\x3' for virtual key 8 with QFlags(ShiftModifier|ControlModifier|MetaModifier) Mismatch between Cocoa '\x0' and Carbon '\x3' for virtual key 8 with QFlags(AltModifier|MetaModifier) Mismatch between Cocoa '\x0' and Carbon '\x3' for virtual key 8 with QFlags(ShiftModifier|AltModifier|MetaModifier) Mismatch between Cocoa '\x0' and Carbon '\x3' for virtual key 8 with QFlags(ControlModifier|AltModifier|MetaModifier) Mismatch between Cocoa '\x0' and Carbon '\x3' for virtual key 8 with QFlags(ShiftModifier|ControlModifier|AltModifier|MetaModifier) > close > open > /Users/zoechen/Downloads/ChimeraX/AlphaFold/prediction_7_I510V_NI/I510V_N566I.pdb Chain information for I510V_N566I.pdb #1 --- Chain | Description A | No description available > open /Users/zoechen/Downloads/5vy8.cif.gz File reader requires uncompressed file; '/Users/zoechen/Downloads/5vy8.cif.gz' is compressed > open /Users/zoechen/Downloads/5vy8.cif Summary of feedback from opening /Users/zoechen/Downloads/5vy8.cif --- note | Fetching CCD ADP from http://ligand-expo.rcsb.org/reports/A/ADP/ADP.cif 5vy8.cif title: S. cerevisiae Hsp104-ADP complex [more info...] Chain information for 5vy8.cif #2 --- Chain | Description | UniProt A B C D E F | Heat shock protein 104 | HS104_YEAST Non-standard residues in 5vy8.cif #2 --- ADP — adenosine-5'-diphosphate QDockWidget failed to find relevant screen info. screenFrom: QScreen(0x600002ab5b10, name=""Built-in Retina Display"") screenTo: QScreen(0x0) wdgScreen: QScreen(0x600002ab5b10, name=""Built-in Retina Display"") orgWdgScreen QScreen(0x600002ab5b10, name=""Built-in Retina Display"") > select #2/D 5614 atoms, 5683 bonds, 1 pseudobond, 707 residues, 2 models selected > hide #* target a > show (#!2 & sel) target ab > cartoon hide (#!2 & sel) > cartoon (#!2 & sel) > hide (#!2 & sel) target a > select #1/A 7169 atoms, 7261 bonds, 908 residues, 1 model selected > color sel cornflower blue > ui tool show Matchmaker > matchmaker #1 to #2/D pairing bs Parameters --- Chain pairing | bs Alignment algorithm | Needleman-Wunsch Similarity matrix | BLOSUM-62 SS fraction | 0.3 Gap open (HH/SS/other) | 18/18/6 Gap extend | 1 SS matrix | | | H | S | O ---|---|---|--- H | 6 | -9 | -6 S | | 6 | -6 O | | | 4 Iteration cutoff | 2 Matchmaker 5vy8.cif, chain D (#2) with I510V_N566I.pdb, chain A (#1), sequence alignment score = 3896.7 RMSD between 255 pruned atom pairs is 1.178 angstroms; (across all 705 pairs: 5.570) > ui tool show ""Show Sequence Viewer"" > sequence chain #1/A Alignment identifier is 1/A > select #1/A:510 7 atoms, 6 bonds, 1 residue, 1 model selected > select #1/A:510 7 atoms, 6 bonds, 1 residue, 1 model selected > show sel target ab > ui tool show ""Show Sequence Viewer"" > sequence chain #2/A #2/B #2/C #2/D #2/E #2/F Alignment identifier is 1 > select #2/C-E:510 24 atoms, 21 bonds, 3 residues, 1 model selected > select #2/C-E:510 24 atoms, 21 bonds, 3 residues, 1 model selected > show sel target ab > hide sel target a > select #2/C-E:510 24 atoms, 21 bonds, 3 residues, 1 model selected > select #2/C-E:510-511 45 atoms, 45 bonds, 6 residues, 1 model selected > select > #2/A-B,F:166-171,174-181,189-202,213-232,235-240,247-253,259-274,285-289,300-309,317-334,344-364,368-383,387-409,541-562,564-580,583-601,619-638,642-646,668-678,687-704,730-737,743-765,775-796,806-819,825-847/C-E:166-171,174-181,189-202,213-232,235-240,247-253,259-274,285-289,300-309,317-334,344-364,368-383,387-433,439-525,541-562,564-580,583-601,619-638,642-646,668-678,687-704,730-737,743-765,775-796,806-819,825-847 20394 atoms, 20479 bonds, 2565 residues, 1 model selected > ui mousemode right select > select clear > select #2/D:510 8 atoms, 7 bonds, 1 residue, 1 model selected > show sel target ab > hide sel target a > cartoon sel > style sel stick Changed 8 atom styles > show sel target ab > style sel ball Changed 8 atom styles > style sel stick Changed 8 atom styles > ui mousemode right translate > ui mousemode right ""translate selected models"" > ui mousemode right ""move picked models"" > view matrix models > #1,0.62429,-0.60994,0.4881,157.9,0.46031,0.79204,0.40099,143.4,-0.63117,-0.025655,0.77522,112.92 > undo > ui mousemode right translate > ui mousemode right select > ui mousemode right translate > ui mousemode right select > select #1/A:510 7 atoms, 6 bonds, 1 residue, 1 model selected > ui tool show H-Bonds > hbonds sel dashes 6 reveal true retainCurrent true 2 hydrogen bonds found > hbonds sel dashes 6 reveal true retainCurrent true 2 hydrogen bonds found > ui mousemode right translate > ui mousemode right select > select #1/A:486 8 atoms, 7 bonds, 1 residue, 1 model selected > show sel target ab > select #1/A:487 9 atoms, 8 bonds, 1 residue, 1 model selected > select #2/D:486 8 atoms, 7 bonds, 1 residue, 1 model selected > show sel target ab > style sel stick Changed 8 atom styles > select #1/A:506 11 atoms, 10 bonds, 1 residue, 1 model selected > select #1/A:506 11 atoms, 10 bonds, 1 residue, 1 model selected > show sel target ab > select #1/A:487 9 atoms, 8 bonds, 1 residue, 1 model selected > show sel target ab > select #2/D:487 9 atoms, 8 bonds, 1 residue, 1 model selected > show sel target ab > style sel stick Changed 9 atom styles > select #2/D:506 11 atoms, 10 bonds, 1 residue, 1 model selected > show sel target ab > style sel stick Changed 11 atom styles > color sel byelement > select #2/D:487 9 atoms, 8 bonds, 1 residue, 1 model selected > color sel byelement > select #2/D:506@NH2 1 atom, 1 residue, 1 model selected > select add #2/D:487@OE2 2 atoms, 2 residues, 1 model selected > ui tool show Distances > select #2/D:506@NH2 1 atom, 1 residue, 1 model selected > select add #2/D:487@OE2 2 atoms, 2 residues, 1 model selected > distance #2/D:506@NH2 #2/D:487@OE2 Distance between 5vy8.cif #2/D ARG 506 NH2 and GLU 487 OE2: 7.417Å > ~distance #2/D:506@NH2 #2/D:487@OE2 > select #2/C 5614 atoms, 5683 bonds, 1 pseudobond, 707 residues, 2 models selected > cartoon (#!2 & sel) > cartoon hide (#!2 & sel) > select #2/E 5614 atoms, 5683 bonds, 1 pseudobond, 707 residues, 2 models selected > cartoon (#!2 & sel) > select #2/E:389 7 atoms, 7 bonds, 1 residue, 1 model selected > ui mousemode right translate > ui mousemode right select > select #2/D:487 9 atoms, 8 bonds, 1 residue, 1 model selected > hide sel target a > select #2/D:507 12 atoms, 12 bonds, 1 residue, 1 model selected > select #2/D:506 11 atoms, 10 bonds, 1 residue, 1 model selected > hide sel target a > ui mousemode right translate > ui mousemode right select > select #1/A:506 11 atoms, 10 bonds, 1 residue, 1 model selected > hide sel target a > select #1/A:486 8 atoms, 7 bonds, 1 residue, 1 model selected > select #1/A:510 7 atoms, 6 bonds, 1 residue, 1 model selected > select #1/A:486 8 atoms, 7 bonds, 1 residue, 1 model selected > select #2/E:426 7 atoms, 6 bonds, 1 residue, 1 model selected > select #2/D:507 12 atoms, 12 bonds, 1 residue, 1 model selected > select #2/D:508 11 atoms, 11 bonds, 1 residue, 1 model selected > select #2/E:578 6 atoms, 5 bonds, 1 residue, 1 model selected > select clear > select #2/E:426 7 atoms, 6 bonds, 1 residue, 1 model selected > show sel target ab > style sel stick Changed 7 atom styles > color sel byelement > select clear > select #2/D:507 12 atoms, 12 bonds, 1 residue, 1 model selected > show sel target ab > style sel stick Changed 12 atom styles > select #2/D:508 11 atoms, 11 bonds, 1 residue, 1 model selected > show sel target ab > style sel stick Changed 11 atom styles > select #1/A:511 7 atoms, 7 bonds, 1 residue, 1 model selected > show sel target ab > select #2/D:511 7 atoms, 7 bonds, 1 residue, 1 model selected > show sel target ab > style sel stick Changed 7 atom styles > select #2/D:513 8 atoms, 7 bonds, 1 residue, 1 model selected > select #1/A:513 8 atoms, 7 bonds, 1 residue, 1 model selected > select #1/A:508 11 atoms, 11 bonds, 1 residue, 1 model selected > show sel target ab > select #1/A:509 5 atoms, 4 bonds, 1 residue, 1 model selected > select #1/A:507 12 atoms, 12 bonds, 1 residue, 1 model selected > show sel target ab > select #2/E:426 7 atoms, 6 bonds, 1 residue, 1 model selected > ui tool show H-Bonds > hbonds sel dashes 6 reveal true retainCurrent true 3 hydrogen bonds found > select #2/D:515 9 atoms, 8 bonds, 1 residue, 1 model selected > show sel target ab > style sel stick Changed 9 atom styles > ui mousemode right clip > ui tool show ""Side View"" > ui mousemode right translate > ui tool show Distances > ui mousemode right select > select clear > select #2/D:510@CG2 1 atom, 1 residue, 1 model selected > select #2/D:510@CG2 1 atom, 1 residue, 1 model selected > select #2/E:419 11 atoms, 10 bonds, 1 residue, 1 model selected > ui mousemode right translate > ui mousemode right select > select #2/E:426@CG2 1 atom, 1 residue, 1 model selected > select #2/D:510@CG2 1 atom, 1 residue, 1 model selected > select add #2/E:426@CG2 2 atoms, 2 residues, 1 model selected > distance #2/D:510@CG2 #2/E:426@CG2 Distance between 5vy8.cif #2/D ILE 510 CG2 and /E VAL 426 CG2: 3.601Å > ui mousemode right translate > ui mousemode right select > select #2/E:426@CG1 1 atom, 1 residue, 1 model selected > select add #2/D:510@CG2 2 atoms, 2 residues, 1 model selected > distance #2/E:426@CG1 #2/D:510@CG2 Distance between 5vy8.cif #2/E VAL 426 CG1 and /D ILE 510 CG2: 3.998Å Drag select of 4 residues > ui mousemode right translate > save ""/Users/zoechen/Desktop/I510V:NI ADP.pdb"" > ui mousemode right select > select #2/E:426@CG2 1 atom, 1 residue, 1 model selected > select add #1/A:511@CB 2 atoms, 2 residues, 2 models selected > distance #2/E:426@CG2 #1/A:511@CB Distance between 5vy8.cif #2/E VAL 426 CG2 and I510V_N566I.pdb #1/A PRO 511 CB: 2.413Å > select #2/E:426@CG1 1 atom, 1 residue, 1 model selected > select #2/E:426@CG1 1 atom, 1 residue, 1 model selected > select subtract #2/E:426@CG1 Nothing selected > select #2/E:426@CG1 1 atom, 1 residue, 1 model selected > select add #2/D:511@CG 2 atoms, 2 residues, 1 model selected > distance #2/E:426@CG1 #2/D:511@CG Distance between 5vy8.cif #2/E VAL 426 CG1 and /D PRO 511 CG: 3.722Å > save /Users/zoechen/Desktop/alignment/I510V_NI_ADP.pdb ===== Log before crash end ===== Log: UCSF ChimeraX version: 1.5 (2022-11-24) © 2016-2022 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 Metal - 83 OpenGL renderer: Apple M1 OpenGL vendor: Apple Python: 3.9.11 Locale: UTF-8 Qt version: PyQt6 6.3.1, Qt 6.3.1 Qt runtime version: 6.3.2 Qt platform: cocoa Hardware: Hardware Overview: Model Name: MacBook Air Model Identifier: MacBookAir10,1 Model Number: MGN93LL/A Chip: Apple M1 Total Number of Cores: 8 (4 performance and 4 efficiency) Memory: 8 GB System Firmware Version: 8419.80.7 OS Loader Version: 8419.80.7 Software: System Software Overview: System Version: macOS 13.2.1 (22D68) Kernel Version: Darwin 22.3.0 Time since boot: 47 days, 19 hours, 14 minutes Graphics/Displays: Apple M1: Chipset Model: Apple M1 Type: GPU Bus: Built-In Total Number of Cores: 7 Vendor: Apple (0x106b) Metal Support: Metal 3 Displays: Color LCD: Display Type: Built-In Retina LCD Resolution: 2560 x 1600 Retina Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: Yes Connection Type: Internal Installed Packages: alabaster: 0.7.12 appdirs: 1.4.4 appnope: 0.1.3 asttokens: 2.1.0 Babel: 2.11.0 backcall: 0.2.0 blockdiag: 3.0.0 build: 0.8.0 certifi: 2021.10.8 cftime: 1.6.2 charset-normalizer: 2.1.1 ChimeraX-AddCharge: 1.4 ChimeraX-AddH: 2.2.1 ChimeraX-AlignmentAlgorithms: 2.0 ChimeraX-AlignmentHdrs: 3.2.1 ChimeraX-AlignmentMatrices: 2.0 ChimeraX-Alignments: 2.6 ChimeraX-AlphaFold: 1.0 ChimeraX-AltlocExplorer: 1.0.3 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.0 ChimeraX-Atomic: 1.41.5 ChimeraX-AtomicLibrary: 8.0.3 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.3 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.1.2 ChimeraX-BondRot: 2.0.1 ChimeraX-BugReporter: 1.0.1 ChimeraX-BuildStructure: 2.7.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.2 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.3.1 ChimeraX-ChangeChains: 1.0.2 ChimeraX-CheckWaters: 1.3 ChimeraX-ChemGroup: 2.0 ChimeraX-Clashes: 2.2.4 ChimeraX-ColorActions: 1.0.3 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.2 ChimeraX-CommandLine: 1.2.4 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.5 ChimeraX-CoreFormats: 1.1 ChimeraX-coulombic: 1.3.2 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.2 ChimeraX-Dicom: 1.1 ChimeraX-DistMonitor: 1.3 ChimeraX-DockPrep: 1.0 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ExperimentalCommands: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.2 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1 ChimeraX-Hbonds: 2.4 ChimeraX-Help: 1.2.1 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-Label: 1.1.7 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.5 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.2 ChimeraX-Map: 1.1.2 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.1 ChimeraX-MatchMaker: 2.0.9 ChimeraX-MDcrds: 2.6 ChimeraX-MedicalToolbar: 1.0.2 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1 ChimeraX-mmCIF: 2.8 ChimeraX-MMTF: 2.2 ChimeraX-Modeller: 1.5.6 ChimeraX-ModelPanel: 1.3.6 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.1 ChimeraX-MouseModes: 1.1.1 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.9.1 ChimeraX-PDB: 2.6.8 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.2 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1 ChimeraX-PubChem: 2.1 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 2.0.1 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.7.2 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.1.1 ChimeraX-ShowSequences: 1.0.1 ChimeraX-SideView: 1.0.1 ChimeraX-Smiles: 2.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.10 ChimeraX-STL: 1.0 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.1.3 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.1.2 ChimeraX-ToolshedUtils: 1.2.1 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.24.3 ChimeraX-uniprot: 2.2.1 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.1.4 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.1 ChimeraX-WebServices: 1.1.0 ChimeraX-Zone: 1.0.1 colorama: 0.4.5 cxservices: 1.2 cycler: 0.11.0 Cython: 0.29.32 debugpy: 1.6.4 decorator: 5.1.1 docutils: 0.19 entrypoints: 0.4 executing: 1.2.0 filelock: 3.7.1 fonttools: 4.38.0 funcparserlib: 1.0.1 grako: 3.16.5 h5py: 3.7.0 html2text: 2020.1.16 idna: 3.4 ihm: 0.33 imagecodecs: 2022.7.31 imagesize: 1.4.1 importlib-metadata: 5.1.0 ipykernel: 6.15.3 ipython: 8.4.0 ipython-genutils: 0.2.0 jedi: 0.18.1 Jinja2: 3.1.2 jupyter-client: 7.3.4 jupyter-core: 5.1.0 kiwisolver: 1.4.4 line-profiler: 3.5.1 lxml: 4.9.1 lz4: 4.0.2 MarkupSafe: 2.1.1 matplotlib: 3.5.2 matplotlib-inline: 0.1.6 msgpack: 1.0.4 nest-asyncio: 1.5.6 netCDF4: 1.6.0 networkx: 2.8.5 numexpr: 2.8.4 numpy: 1.23.1 openvr: 1.23.701 packaging: 21.3 ParmEd: 3.4.3 parso: 0.8.3 pep517: 0.13.0 pexpect: 4.8.0 pickleshare: 0.7.5 Pillow: 9.2.0 pip: 22.2.2 pkginfo: 1.8.3 platformdirs: 2.5.4 prompt-toolkit: 3.0.33 psutil: 5.9.1 ptyprocess: 0.7.0 pure-eval: 0.2.2 pycollada: 0.7.2 pydicom: 2.3.0 Pygments: 2.12.0 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 3.0.9 PyQt6-commercial: 6.3.1 PyQt6-Qt6: 6.3.2 PyQt6-sip: 13.4.0 PyQt6-WebEngine-commercial: 6.3.1 PyQt6-WebEngine-Qt6: 6.3.2 python-dateutil: 2.8.2 pytz: 2022.6 pyzmq: 24.0.1 qtconsole: 5.3.1 QtPy: 2.3.0 RandomWords: 0.4.0 requests: 2.28.1 scipy: 1.9.0 setuptools: 65.1.1 setuptools-scm: 7.0.5 sfftk-rw: 0.7.2 six: 1.16.0 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 Sphinx: 5.1.1 sphinx-autodoc-typehints: 1.19.1 sphinxcontrib-applehelp: 1.0.2 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 stack-data: 0.6.2 tables: 3.7.0 tifffile: 2022.7.31 tinyarray: 1.2.4 tomli: 2.0.1 tornado: 6.2 traitlets: 5.3.0 typing-extensions: 4.4.0 urllib3: 1.26.13 wcwidth: 0.2.5 webcolors: 1.12 wheel: 0.37.1 wheel-filename: 1.4.1 zipp: 3.11.0 }}} " defect closed normal Window Toolkit duplicate all ChimeraX