id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
74	Atom spec parsing eats following file path.	Tom Goddard	Conrad Huang	"Parsing does not work for a command requiring an atom spec followed by a file path if the file path starts with /.  Get a ""Missing required argument path"" error apparently because the atom spec parsing consumed the file path perhaps thinking it is a chain id.

  test #1 /tmp/this

-> Missing required argument path.

Test code is attached.

This is not a contrived example.  I encountered this bug making a command called ""imodcopies"" that makes copies of a map (first arg) using matrices specified in a file (second arg).

Quoting the second argument works, but a user would never figure that out.

"	defect	closed	minor		Command Line		wontfix						all	chimera