id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
745	"""hbonds"" doesn't like ensembles, I guess"	Elaine Meng	Eric Pettersen	"I tried 2 different ensembles, seemingly unrelated: 1g1p and 2nbk

Open either one of those, and try hbonds on even just the first submodel:

hb spec #1.1

hbonds spec #1.1
75 hydrogen bonds found
Traceback (most recent call last):
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/cmd_line/tool.py"", line 178, in execute
cmd.run(cmd_text)
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/core/commands/cli.py"", line 2366, in run
result = ci.function(session, **kw_args)
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/chimerax/hbonds/cmd.py"", line 133, in cmd_hbonds
sqdist = h.scene_coord.sqdistance(acc.scene_coord)
AttributeError: 'numpy.ndarray' object has no attribute 'sqdistance'


"	defect	closed	major		Structure Analysis		fixed						all	ChimeraX