id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
6984	save_command bundle fails to initialize when no Qt available	Greg Couch	Eric Pettersen	"I was testing the CentOS 9 singularity build and ChimeraX gives tracebacks on startup due to Qt not being available/loadable.  I believe this is because the base OS is CentOS 7.  Ideally, there wouldn't any Qt stuff imported in nogui mode, if only to speed up startup.
 
{{{
Singularity> ChimeraX.app/bin/ChimeraX --nogui
Traceback (most recent call last):
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/chimerax/core/toolshed/info.py"", line 490, in get_module
    m = importlib.import_module(self.package_name)
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/importlib/__init__.py"", line 127, in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
  File ""<frozen importlib._bootstrap>"", line 1030, in _gcd_import
  File ""<frozen importlib._bootstrap>"", line 1007, in _find_and_load
  File ""<frozen importlib._bootstrap>"", line 986, in _find_and_load_unlocked
  File ""<frozen importlib._bootstrap>"", line 680, in _load_unlocked
  File ""<frozen importlib._bootstrap_external>"", line 850, in exec_module
  File ""<frozen importlib._bootstrap>"", line 228, in _call_with_frames_removed
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/chimerax/save_command/__init__.py"", line 101, in <module>
    from .options import SaveModelOptionWidget
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/chimerax/save_command/options.py"", line 14, in <module>
    from Qt.QtWidgets import QFrame, QHBoxLayout, QLabel
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/Qt/__init__.py"", line 64, in <module>
    from PyQt6.QtCore import PYQT_VERSION_STR as PYQT6_VERSION
ImportError: libQt6Core.so.6: cannot open shared object file: No such file or directory

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/chimerax/core/toolshed/info.py"", line 375, in init_manager
    api = self._get_api(session.logger)
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/chimerax/core/toolshed/info.py"", line 509, in _get_api
    m = self.get_module()
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/chimerax/core/toolshed/info.py"", line 492, in get_module
    raise ToolshedError(""Error importing bundle %s's module: %s"" % (self.name, str(e)))
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-SaveCommand's module: libQt6Core.so.6: cannot open shared object file: No such file or directory

Traceback (most recent call last):
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/chimerax/core/toolshed/info.py"", line 365, in initialize
    api._api_caller.initialize(api, session, self)
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/chimerax/core/toolshed/__init__.py"", line 1278, in initialize
    return cls._get_func(api, ""initialize"")(session, bi)
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/chimerax/bug_reporter/__init__.py"", line 29, in initialize
    crash_report.register_signal_handler(session)
  File ""/tmp/gregc-chimerax/ChimeraX.app/lib/python3.9/site-packages/chimerax/bug_reporter/crash_report.py"", line 73, in register_signal_handler
    session.ui.set_fatal_error_log_file(_fault_handler_file)
AttributeError: 'UI' object has no attribute 'set_fatal_error_log_file'

Bundle 'ChimeraX-SaveCommand' custom initialization failed
Bundle 'ChimeraX-BugReporter' custom initialization failed
UCSF ChimeraX version: 1.5.dev202205281901 (2022-05-28)
© 2016-2022 Regents of the University of California.  All rights reserved.
cmd> 
}}}
"	defect	closed	high		Input/Output		fixed						all	ChimeraX