id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 6207 Allow AlphaFold to use additonal databases for making sequence alignments cruzrey@… Tom Goddard "Suggested by Jorge Cruz-Reyes Begin forwarded message: From: Tom Goddard Subject: Re: [Chimerax-registration] ChimeraX registration comment Date: February 15, 2022 at 10:56:38 AM PST To: Jorge Cruz-Reyes Cc: Chimera Staff Hi Jorge, It would be nice to be able to add additional sequence databases for the alphafold prediction. That is what as the discoba_alphafold github project does, and also it uses mmseqs2 for the sequence search which is something I have wanted to try in ChimeraX. I have a lot of improvements I am trying to make and I think handling additional databases won't happen soon because more basic problems like running longer sequences or handling errors well have higher priority. I appreciate your suggestion and pointing me to the discoba project and will think more about it. Tom On Feb 15, 2022, at 7:30 AM, Jorge Cruz-Reyes wrote: Please add the option to use this resource within chimeraX https://github.com/zephyris/discoba_alphafold _______________________________________________ Chimerax-registration mailing list Chimerax-registration@cgl.ucsf.edu https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-registration " enhancement assigned moderate Structure Prediction all ChimeraX