id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 5946 Crash after opening session containing volumes nxb318@… Eric Pettersen "{{{ The following bug report has been submitted: Platform: Windows-10-10.0.19043 ChimeraX Version: 1.3.dev202109080319 (2021-09-08 03:19:35 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Windows fatal exception: access violation Thread 0x00009c94 (most recent call first): File ""C:\Program Files\ChimeraX 1.3.dev202109080319\bin\lib\threading.py"", line 316 in wait File ""C:\Program Files\ChimeraX 1.3.dev202109080319\bin\lib\threading.py"", line 574 in wait File ""C:\Program Files\ChimeraX 1.3.dev202109080319\bin\lib\threading.py"", line 1284 in run File ""C:\Program Files\ChimeraX 1.3.dev202109080319\bin\lib\threading.py"", line 973 in _bootstrap_inner File ""C:\Program Files\ChimeraX 1.3.dev202109080319\bin\lib\threading.py"", line 930 in _bootstrap Current thread 0x00005ec4 (most recent call first): File ""C:\Program Files\ChimeraX 1.3.dev202109080319\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files\ChimeraX 1.3.dev202109080319\bin\lib\site-packages\ChimeraX_main.py"", line 880 in init File ""C:\Program Files\ChimeraX 1.3.dev202109080319\bin\lib\site-packages\ChimeraX_main.py"", line 1029 in File ""C:\Program Files\ChimeraX 1.3.dev202109080319\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files\ChimeraX 1.3.dev202109080319\bin\lib\runpy.py"", line 197 in _run_module_as_main ===== Log before crash start ===== UCSF ChimeraX version: 1.3.dev202109080319 (2021-09-08) © 2016-2021 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open C:\\\Users\\\nxb318\\\Downloads\\\cryosparc_P8_J57_003_volume_map.mrc Opened cryosparc_P8_J57_003_volume_map.mrc as #1, grid size 360,360,360, pixel 1.06, shown at level 0.0939, step 2, values float32 > lighting soft > volume flip #1 Opened cryosparc_P8_J57_003_volume_map.mrc z flip as #2, grid size 360,360,360, pixel 1.06, shown at step 1, values float32 > open > C:/Users/nxb318/Documents/EM_related/rGluK2-3m-domoic_acid_processing/FROM_EXX/cls1_relion/run_class001-zflip.mrc Opened run_class001-zflip.mrc as #3, grid size 420,420,420, pixel 1.06, shown at level 0.00802, step 2, values float32 > select #3 2 models selected > ui mousemode right ""rotate selected models"" > view matrix models > #3,-0.86041,-0.48695,0.15024,496.55,-0.5073,0.84643,-0.16184,182.72,-0.048361,-0.21547,-0.97531,474.69 > view matrix models > #3,-0.86665,-0.48521,0.11616,504.7,-0.49888,0.84549,-0.19042,187.05,-0.0058153,-0.22298,-0.97481,466.77 > ui mousemode right ""translate selected models"" > view matrix models > #3,-0.86665,-0.48521,0.11616,464.5,-0.49888,0.84549,-0.19042,166.16,-0.0058153,-0.22298,-0.97481,462.95 > select clear > ui tool show ""Fit in Map"" Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02524, overlap = 70.26 steps = 104, shift = 10, angle = 4.14 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87059948 -0.48794101 0.06300887 471.99705095 -0.48980027 0.84750698 -0.20451801 193.62989544 0.04639227 -0.20891503 -0.97683278 441.25185334 Axis -0.25432811 0.96112021 -0.10754138 Axis point 262.61402333 0.00000000 230.38676117 Rotation angle (degrees) 179.50470664 Shift along axis 18.60665674 > ui mousemode right ""translate selected models"" > select #3 2 models selected > view matrix models > #3,-0.86665,-0.48521,0.11616,461.89,-0.49888,0.84549,-0.19042,159.39,-0.0058153,-0.22298,-0.97481,463.29 > ui mousemode right ""rotate selected models"" > view matrix models > #3,-0.86996,-0.47736,0.12367,459.27,-0.49299,0.84769,-0.19594,158.72,-0.011298,-0.23143,-0.97279,466.03 > view matrix models > #3,-0.85446,-0.49698,0.15135,454.46,-0.51412,0.85079,-0.10883,144.46,-0.074679,-0.17081,-0.98247,468.42 > view matrix models > #3,-0.87672,-0.45142,0.16606,445.96,-0.47151,0.87481,-0.11126,129.94,-0.095047,-0.17585,-0.97982,473.58 > view matrix models > #3,-0.88282,-0.45617,0.112,459.76,-0.46078,0.88733,-0.018017,105.1,-0.091164,-0.067514,-0.99354,450.85 > ui mousemode right zoom > ui mousemode right ""translate selected models"" > view matrix models > #3,-0.88282,-0.45617,0.112,461.35,-0.46078,0.88733,-0.018017,100.28,-0.091164,-0.067514,-0.99354,451.03 Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02521, overlap = 70.26 steps = 140, shift = 9.91, angle = 10.4 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87064986 -0.48783567 0.06312830 471.98005902 -0.48973260 0.84759711 -0.20430644 193.57328752 0.04616061 -0.20879536 -0.97686934 441.27016899 Axis -0.25427712 0.96114362 -0.10745269 Axis point 262.61333091 0.00000000 230.36099285 Rotation angle (degrees) 179.49425389 Shift along axis 18.62233609 > volume #3 step 1 Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02521, overlap = 70.26 steps = 40, shift = 0.00205, angle = 0.00355 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87063717 -0.48786045 0.06311185 471.98697431 -0.48975093 0.84757443 -0.20435657 193.59059262 0.04620549 -0.20882952 -0.97685991 441.26485662 Axis -0.25428985 0.96113773 -0.10747526 Axis point 262.61683940 0.00000000 230.36557021 Rotation angle (degrees) 179.49607870 Shift along axis 18.62067258 Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02523, overlap = 70.26 steps = 48, shift = 0.0193, angle = 0.0122 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87060219 -0.48793304 0.06303314 471.99636754 -0.48979704 0.84750617 -0.20452909 193.63413604 0.04637552 -0.20893691 -0.97682889 441.25529520 Axis -0.25432527 0.96112000 -0.10754999 Axis point 262.61643246 0.00000000 230.38694327 Rotation angle (degrees) 179.50348391 Shift along axis 18.60803188 Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02524, overlap = 70.26 steps = 44, shift = 0.0107, angle = 0.0122 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87063251 -0.48787054 0.06309806 471.98325883 -0.48975837 0.84757259 -0.20434640 193.58723934 0.04621441 -0.20881342 -0.97686293 441.27221067 Axis -0.25429452 0.96113725 -0.10746847 Axis point 262.61367625 0.00000000 230.36985552 Rotation angle (degrees) 179.49675540 Shift along axis 18.61829910 Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02523, overlap = 70.26 steps = 60, shift = 0.0097, angle = 0.0123 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87059736 -0.48794282 0.06302417 472.00100620 -0.48980500 0.84750313 -0.20452262 193.63620809 0.04638216 -0.20892641 -0.97683082 441.25031034 Axis -0.25433009 0.96111921 -0.10754566 Axis point 262.61858621 0.00000000 230.38513375 Rotation angle (degrees) 179.50394882 Shift along axis 18.60886392 Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02521, overlap = 70.26 steps = 40, shift = 0.0122, angle = 0.00651 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87060848 -0.48791682 0.06307180 471.99756528 -0.48979414 0.84753250 -0.20442693 193.61695142 0.04628793 -0.20886802 -0.97684778 441.25522881 Axis -0.25431856 0.96112684 -0.10750476 Axis point 262.62145825 0.00000000 230.37317959 Rotation angle (degrees) 179.49972412 Shift along axis 18.61566546 Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02524, overlap = 70.26 steps = 40, shift = 0.0164, angle = 0.0114 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87055918 -0.48801759 0.06297257 472.01527641 -0.48986575 0.84746143 -0.20454993 193.65793738 0.04645714 -0.20892093 -0.97682843 441.23565661 Axis -0.25436814 0.96110837 -0.10755252 Axis point 262.62511500 0.00000000 230.38794603 Rotation angle (degrees) 179.50771597 Shift along axis 18.60461271 Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02523, overlap = 70.26 steps = 44, shift = 0.00189, angle = 0.00471 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87058611 -0.48796359 0.06301867 472.00236213 -0.48982410 0.84749223 -0.20452207 193.64017294 0.04639149 -0.20892214 -0.97683129 441.24868928 Axis -0.25434120 0.96111637 -0.10754472 Axis point 262.62009621 0.00000000 230.38542986 Rotation angle (degrees) 179.50438929 Shift along axis 18.60712530 Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02523, overlap = 70.26 steps = 44, shift = 0.00133, angle = 0.00284 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87060663 -0.48792560 0.06302939 471.99612072 -0.48979025 0.84751636 -0.20450316 193.62607583 0.04636388 -0.20891298 -0.97683456 441.25367886 Axis -0.25432088 0.96112265 -0.10753673 Axis point 262.61519284 0.00000000 230.38381509 Rotation angle (degrees) 179.50324999 Shift along axis 18.60896398 Fit map cryosparc_P8_J57_003_volume_map.mrc in map run_class001-zflip.mrc using 58304 points correlation = 0.7773, correlation about mean = 0.02523, overlap = 70.26 steps = 44, shift = 0.00155, angle = 0.00152 degrees Position of cryosparc_P8_J57_003_volume_map.mrc (#1) relative to run_class001-zflip.mrc (#3) coordinates: Matrix rotation and translation -0.87061471 -0.48790975 0.06304050 471.99354363 -0.48977785 0.84752715 -0.20448813 193.61975800 0.04634322 -0.20890622 -0.97683699 441.25627958 Axis -0.25431280 0.96112545 -0.10753075 Axis point 262.61408707 0.00000000 230.38209030 Rotation angle (degrees) 179.50230418 Shift along axis 18.61025542 > select clear > volume #3 level 0.0138 > ui tool show ""Side View"" > open > C:/Users/nxb318/Documents/EM_related/rGluK2-3m-domoic_acid_processing/FROM_EXX/Presentation/cls1_LBD- > matching.cxs opened ChimeraX session > open > C:/Users/nxb318/Documents/EM_related/rGluK2-3m-domoic_acid_processing/FROM_EXX/Presentation/all.cxs Opened postprocess-zlfip.mrc as #4, grid size 420,420,420, pixel 1.06, shown at level 0.0151, step 1, values float32 Opened run_class001-zflip.mrc as #5, grid size 420,420,420, pixel 1.06, shown at level 0.0144, step 1, values float32 Opened run_class001-zflip.mrc as #6, grid size 420,420,420, pixel 1.06, shown at level 0.0147, step 1, values float32 Opened run_class001-zflip.mrc as #7, grid size 420,420,420, pixel 1.06, shown at level 0.0139, step 1, values float32 opened ChimeraX session ===== Log before crash end ===== Log: UCSF ChimeraX version: 1.3.dev202109080319 (2021-09-08) © 2016-2021 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 3.3.0 NVIDIA 496.49 OpenGL renderer: NVIDIA GeForce RTX 2080/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation Manufacturer: Dell Inc. Model: OptiPlex 7071 OS: Microsoft Windows 10 Pro (Build 19043) Memory: 34,140,291,072 MaxProcessMemory: 137,438,953,344 CPU: 8 Intel(R) Core(TM) i7-9700 CPU @ 3.00GHz OSLanguage: en-US Locale: ('en_US', 'cp1252') PyQt5 5.15.2, Qt 5.15.2 Installed Packages: alabaster: 0.7.12 appdirs: 1.4.4 Babel: 2.9.1 backcall: 0.2.0 blockdiag: 2.0.1 certifi: 2021.5.30 cftime: 1.5.0 chardet: 4.0.0 ChimeraX-AddCharge: 1.1.4 ChimeraX-AddH: 2.1.10 ChimeraX-AlignmentAlgorithms: 2.0 ChimeraX-AlignmentHdrs: 3.2 ChimeraX-AlignmentMatrices: 2.0 ChimeraX-Alignments: 2.2.2 ChimeraX-AlphaFold: 1.0 ChimeraX-AltlocExplorer: 1.0.1 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.0 ChimeraX-Atomic: 1.29.1 ChimeraX-AtomicLibrary: 4.1.4 ChimeraX-AtomSearch: 2.0 ChimeraX-AtomSearchLibrary: 1.0 ChimeraX-AxesPlanes: 2.0 ChimeraX-BasicActions: 1.1 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.0 ChimeraX-BondRot: 2.0 ChimeraX-BugReporter: 1.0 ChimeraX-BuildStructure: 2.5.3 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.1 ChimeraX-ButtonPanel: 1.0 ChimeraX-CageBuilder: 1.0 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.2 ChimeraX-ChemGroup: 2.0 ChimeraX-Clashes: 2.1 ChimeraX-ColorActions: 1.0 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.4.1 ChimeraX-CommandLine: 1.1.5 ChimeraX-ConnectStructure: 2.0 ChimeraX-Contacts: 1.0 ChimeraX-Core: 1.3.dev202109080319 ChimeraX-CoreFormats: 1.1 ChimeraX-coulombic: 1.3.1 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0 ChimeraX-DataFormats: 1.2.1 ChimeraX-Dicom: 1.0 ChimeraX-DistMonitor: 1.1.4 ChimeraX-DistUI: 1.0 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ExperimentalCommands: 1.0 ChimeraX-FileHistory: 1.0 ChimeraX-FunctionKey: 1.0 ChimeraX-Geometry: 1.1 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1 ChimeraX-Hbonds: 2.1.1 ChimeraX-Help: 1.2 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0 ChimeraX-Label: 1.1 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.4 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.1 ChimeraX-Map: 1.1 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0 ChimeraX-MapFilter: 2.0 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1 ChimeraX-Markers: 1.0 ChimeraX-Mask: 1.0 ChimeraX-MatchMaker: 2.0.1 ChimeraX-MDcrds: 2.5 ChimeraX-MedicalToolbar: 1.0.1 ChimeraX-Meeting: 1.0 ChimeraX-MLP: 1.1 ChimeraX-mmCIF: 2.4 ChimeraX-MMTF: 2.1 ChimeraX-Modeller: 1.1.1 ChimeraX-ModelPanel: 1.1 ChimeraX-ModelSeries: 1.0 ChimeraX-Mol2: 2.0 ChimeraX-Morph: 1.0 ChimeraX-MouseModes: 1.1 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nucleotides: 2.0.2 ChimeraX-OpenCommand: 1.7 ChimeraX-PDB: 2.6.1 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.1 ChimeraX-PDBMatrices: 1.0 ChimeraX-Phenix: 0.3 ChimeraX-PickBlobs: 1.0 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.0.1 ChimeraX-PubChem: 2.1 ChimeraX-ReadPbonds: 1.0 ChimeraX-Registration: 1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-ResidueFit: 1.0 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 2.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.4.3 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0 ChimeraX-Shortcuts: 1.1 ChimeraX-ShowAttr: 1.0 ChimeraX-ShowSequences: 1.0 ChimeraX-SideView: 1.0 ChimeraX-Smiles: 2.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.6 ChimeraX-STL: 1.0 ChimeraX-Storm: 1.0 ChimeraX-Struts: 1.0 ChimeraX-Surface: 1.0 ChimeraX-SwapAA: 2.0 ChimeraX-SwapRes: 2.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.1 ChimeraX-ToolshedUtils: 1.2 ChimeraX-Tug: 1.0 ChimeraX-UI: 1.12 ChimeraX-uniprot: 2.2 ChimeraX-UnitCell: 1.0 ChimeraX-ViewDockX: 1.0.1 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0 ChimeraX-WebServices: 1.0 ChimeraX-Zone: 1.0 colorama: 0.4.4 comtypes: 1.1.10 cxservices: 1.1 cycler: 0.10.0 Cython: 0.29.23 decorator: 5.0.9 distlib: 0.3.1 docutils: 0.17.1 filelock: 3.0.12 funcparserlib: 0.3.6 grako: 3.16.5 h5py: 3.4.0 html2text: 2020.1.16 idna: 2.10 ihm: 0.20 imagecodecs: 2021.4.28 imagesize: 1.2.0 ipykernel: 5.5.5 ipython: 7.23.1 ipython-genutils: 0.2.0 jedi: 0.18.0 Jinja2: 2.11.3 jupyter-client: 6.1.12 jupyter-core: 4.7.1 kiwisolver: 1.3.2 lxml: 4.6.3 lz4: 3.1.3 MarkupSafe: 1.1.1 matplotlib: 3.4.2 matplotlib-inline: 0.1.3 msgpack: 1.0.2 netCDF4: 1.5.6 networkx: 2.6.2 numexpr: 2.7.3 numpy: 1.21.0 openvr: 1.16.801 packaging: 21.0 ParmEd: 3.2.0 parso: 0.8.2 pickleshare: 0.7.5 Pillow: 8.2.0 pip: 21.1.1 pkginfo: 1.7.0 prompt-toolkit: 3.0.20 psutil: 5.8.0 pycollada: 0.7.1 pydicom: 2.1.2 Pygments: 2.9.0 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 2.4.7 PyQt5-commercial: 5.15.2 PyQt5-sip: 12.8.1 PyQtWebEngine-commercial: 5.15.2 python-dateutil: 2.8.1 pytz: 2021.1 pywin32: 228 pyzmq: 22.2.1 qtconsole: 5.1.0 QtPy: 1.11.0 RandomWords: 0.3.0 requests: 2.25.1 scipy: 1.6.3 setuptools: 57.0.0 sfftk-rw: 0.7.1 six: 1.16.0 snowballstemmer: 2.1.0 sortedcontainers: 2.4.0 Sphinx: 4.0.1 sphinx-autodoc-typehints: 1.12.0 sphinxcontrib-applehelp: 1.0.2 sphinxcontrib-blockdiag: 2.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 suds-jurko: 0.6 tables: 3.6.1 tifffile: 2021.4.8 tinyarray: 1.2.3 tornado: 6.1 traitlets: 5.1.0 urllib3: 1.26.6 wcwidth: 0.2.5 webcolors: 1.11.1 wheel: 0.36.2 wheel-filename: 1.3.0 WMI: 1.5.1 }}} " defect feedback normal Sessions Tom Goddard all ChimeraX