id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 5770 Crash in numpy, probably .any() chimerax-bug-report@… Tom Goddard "{{{ The following bug report has been submitted: Platform: Windows-10-10.0.19041 ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimeraWindows fatal exception: code 0x8001010e x\open_command\dialog.py""Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e , line 135 in show_openWindows fatal exception: code 0x_f8001010e ile_diaWindows fatal exception: code 0x8001010e log File ""C:\Program Files Windows fatal exception: code 0x8001010e (x86)\ChimeraX 1.3rWindows fatal exception: code 0xc28001010e0 211Windows fatal exception: 2code 0x08001010e4 04Windows fatal exception: 0code 0x78001010e\ biWindows fatal exception: ncode 0x\8001010el ib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_Windows fatal exception: code 0xl8001010eo op Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e File Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e Windows fatal exception: code 0x8001010e _Windows fatal exception: rcode 0xu8001010en _coWindows fatal exception: dcode 0xe8001010e File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-pacWindows fatal exception: code 0xk8001010ea gesWindows fatal exception: \code 0xC8001010eh imWindows fatal exception: ecode 0xr8001010ea X_Windows fatal exception: mcode 0xa8001010ei n.Windows fatal exception: pcode 0xy8001010e"" , line 1018Windows fatal exception: in code 0x File Windows fatal exception: ""code 0xC8001010e: \ProWindows fatal exception: gcode 0xr8001010ea m FWindows fatal exception: icode 0xl8001010ee s (Windows fatal exception: xcode 0x88001010e6 )\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_commWindows fatal exception: code 0xa8001010en d\dWindows fatal exception: icode 0xa8001010el og.Windows fatal exception: pcode 0xy8001010e"" , line 135 in Windows fatal exception: scode 0xh8001010e owWindows fatal exception: _code 0xo8001010e pWindows fatal exception: ecode 0xn8001010e_ fiWindows fatal exception: lcode 0xe8001010e_ dWindows fatal exception: iacode 0x8001010elo g File Windows fatal exception: ""code 0xC8001010e :Windows fatal exception: \code 0xP8001010er ogrWindows fatal exception: acode 0xm8001010e Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\Windows fatal exception: code 0x8001010eb in\Windows fatal exception: lcode 0xib\8001010e sitWindows fatal exception: ecode 0x-8001010ep ackWindows fatal exception: acode 0xg8001010ee s\Windows fatal exception: ccode 0xh8001010ei merWindows fatal exception: acode 0xx8001010e\ uiWindows fatal exception: \code 0xg8001010eu i.Windows fatal exception: pcode 0xy8001010e"" , line Windows fatal exception: Windows fatal exception: code 0x3018001010e in evcode 0xWindows fatal exception: ecode 0xn8001010et _8001010eWindows fatal exception: lcode 0xo8001010eo p Windows fatal exception: code 0xWindows fatal exception: 8001010ecode 0x File "" 8001010eWindows fatal exception: C: \Pcode 0xWindows fatal exception: 8001010ecode 0xr8001010eo g Windows fatal exception: code 0xra8001010em FiWindows fatal exception: lcode 0xe8001010es (xWindows fatal exception: 8code 0x68001010e) \ChWindows fatal exception: icode 0xm8001010ee Windows fatal exception: Windows fatal exception: rcode 0xa8001010eX 1code 0x8001010e. 3Windows fatal exception: rcode 0xc8001010e2Windows fatal exception: 0code 0x28001010e1 1 Windows fatal exception: code 0x28001010e04 04Windows fatal exception: 0code 0x78001010e\ binWindows fatal exception: \code 0xl8001010ei b\Windows fatal exception: scode 0xi8001010et e-Windows fatal exception: pcode 0xa8001010ec kWindows fatal exception: acode 0xg8001010ee sWindows fatal exception: \code 0xC8001010eh imeWindows fatal exception: rcode 0xa8001010eX _mWindows fatal exception: acode 0xi8001010en .py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\sWindows fatal exception: code 0x8001010ei te-Windows fatal exception: pcode 0xa8001010ec kWindows fatal exception: acode 0xg8001010e eWindows fatal exception: scode 0x\8001010ec hiWindows fatal exception: mcode 0xe8001010er axWindows fatal exception: \code 0xu8001010ei \gWindows fatal exception: ucode 0xi8001010e. pWindows fatal exception: ycode 0x""8001010e, line 301Windows fatal exception: in code 0xe8001010ev enWindows fatal exception: tcode 0x_lo8001010eo p File Windows fatal exception: ""code 0xC8001010e: \Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\liWindows fatal exception: code 0xb8001010e\ siteWindows fatal exception: -code 0xp8001010ea ckagWindows fatal exception: ecode 0xs8001010e\ ChimWindows fatal exception: ecode 0xr8001010ea X_mWindows fatal exception: acode 0xi8001010en .pWindows fatal exception: ycode 0x""8001010e, line 1018Windows fatal exception: in code 0xWindows fatal exception: code 0x File 8001010e"" CWindows fatal exception: :code 0x\8001010eP rWindows fatal exception: ocode 0xg8001010er am Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _rWindows fatal exception: code 0x8001010e uWindows fatal exception: ncode 0x_8001010ec oWindows fatal exception: dcode 0xe File ""8001010eC :\Windows fatal exception: Pcode 0xr8001010eo gWindows fatal exception: rcode 0xa8001010em Windows fatal exception: Fcode 0xi8001010el eWindows fatal exception: scode 0x 8001010e( xWindows fatal exception: 8code 0x68001010e) \Windows fatal exception: Ccode 0xh8001010ei mWindows fatal exception: ecode 0xr8001010e Windows fatal exception: code 0x8001010eaX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): Windows fatal exception: code 0x8001010e File Windows fatal exception: ""code 0xC8001010e: \ProWindows fatal exception: code 0xg8001010er am Windows fatal exception: Fcode 0xi8001010el esWindows fatal exception: code 0x(8001010ex 86)Windows fatal exception: \code 0xC8001010eh imeWindows fatal exception: rcode 0xa8001010eX 1.Windows fatal exception: 3rcode 0x8001010ec 202Windows fatal exception: 1code 0x18001010e2 040Windows fatal exception: 4code 0xWindows fatal exception: code 0x08001010e7 \8001010eWindows fatal exception: code 0x8001010ebWindows fatal exception: iWindows fatal exception: ncode 0x8001010ecode 0x 8001010e\ libWindows fatal exception: \code 0xs8001010ei te-Windows fatal exception: pcode 0xa8001010ec kaWindows fatal exception: gcode 0xe8001010es \cWindows fatal exception: hcode 0xi8001010em erWindows fatal exception: acode 0xx8001010e\o penWindows fatal exception: _code 0xc8001010eo mmaWindows fatal exception: code 0xn8001010ed \diWindows fatal exception: acode 0xl8001010eo g.py"", line 135 in show_oWindows fatal exception: code 0xp8001010ee n_fWindows fatal exception: icode 0xl8001010ee _dWindows fatal exception: icode 0xa8001010el ogWindows fatal exception: code 0x File 8001010e"" C:Windows fatal exception: \code 0xP8001010er ogWindows fatal exception: rcode 0xa8001010em FWindows fatal exception: icode 0xl8001010ee s (xWindows fatal exception: code 0x88001010e6 )\CWindows fatal exception: hcode 0xi8001010em eraXWindows fatal exception: code 0x18001010e. 3rcWindows fatal exception: 2code 0x08001010e2 112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\siteWindows fatal exception: code 0x-p8001010e acWindows fatal exception: kcode 0xa8001010eg esWindows fatal exception: \ccode 0xhi8001010em erWindows fatal exception: acode 0xx8001010e\ uWindows fatal exception: icode 0x\8001010eg uiWindows fatal exception: .code 0xp8001010ey ""Windows fatal exception: , line code 0x3018001010e in Windows fatal exception: code 0x8001010eev entWindows fatal exception: _code 0xl8001010eo opWindows fatal exception: code 0x File 8001010e"" C:Windows fatal exception: code 0x8001010e\ Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimerWindows fatal exception: code 0x8001010e aXWindows fatal exception: code 0x18001010e. 3rc20Windows fatal exception: 2code 0x18001010e1 2040Windows fatal exception: 4code 0x08001010e7 \biWindows fatal exception: ncode 0x\8001010el ib\Windows fatal exception: scode 0xi8001010et e-paWindows fatal exception: ccode 0xk8001010ea gesWindows fatal exception: \code 0xC8001010eh imeWindows fatal exception: rcode 0xa8001010eX _mWindows fatal exception: acode 0xi8001010en .pWindows fatal exception: ycode 0x""8001010e, line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraXWindows fatal exception: code 0x18001010e. 3rWindows fatal exception: code 0xc8001010e2 02Windows fatal exception: 1code 0x18001010e2 040Windows fatal exception: 40code 0x78001010e\ bWindows fatal exception: icode 0xn8001010e\ lWindows fatal exception: icode 0xb8001010e\ rWindows fatal exception: ucode 0xn8001010ep yWindows fatal exception: .code 0xp8001010ey ""Windows fatal exception: , line code 0x1978001010e in _Windows fatal exception: rcode 0xu8001010en _Windows fatal exception: mcode 0xo8001010ed ule_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 135 in show_open_file_dialog File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\open_command\dialog.py"", line 107 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\chimerax\ui\gui.py"", line 301 in event_loop File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 867 in init File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\ChimeraX_main.py"", line 1018 in File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 87 in _run_code File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\runpy.py"", line 197 in _run_module_as_main Windows fatal exception: code 0x8001010e Thread 0x000033d8 (most recent call first): File ""C:\Program Files (x86)\ChimeraX 1.3rc202112040407\bin\lib\site-packages\numpy\core\_methods.py"", line 57 in _any Windows fatal exception: access violation Log: UCSF ChimeraX version: 1.2.5 (2021-05-24) © 2016-2021 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 3.3.0 - Build 24.20.100.6292 OpenGL renderer: Intel(R) UHD Graphics 620 OpenGL vendor: Intel Manufacturer: FUJITSU Model: FMVU7C3RDA OS: Microsoft Windows 10 Home (Build 19042) Memory: 8,325,218,304 MaxProcessMemory: 137,438,953,344 CPU: 8 Intel(R) Core(TM) i7-8565U CPU @ 1.80GHz OSLanguage: ja-JP Locale: ('ja_JP', 'cp932') PyQt5 5.15.2, Qt 5.15.2 Installed Packages: alabaster: 0.7.12 appdirs: 1.4.4 Babel: 2.9.1 backcall: 0.2.0 blockdiag: 2.0.1 certifi: 2020.12.5 cftime: 1.5.0 chardet: 3.0.4 ChimeraX-AddCharge: 1.0.1 ChimeraX-AddH: 2.1.6 ChimeraX-AlignmentAlgorithms: 2.0 ChimeraX-AlignmentHdrs: 3.2 ChimeraX-AlignmentMatrices: 2.0 ChimeraX-Alignments: 2.1 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.0 ChimeraX-Atomic: 1.13.2 ChimeraX-AtomicLibrary: 3.1.3 ChimeraX-AtomSearch: 2.0 ChimeraX-AtomSearchLibrary: 1.0 ChimeraX-AxesPlanes: 2.0 ChimeraX-BasicActions: 1.1 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 1.1 ChimeraX-BondRot: 2.0 ChimeraX-BugReporter: 1.0 ChimeraX-BuildStructure: 2.5.2 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.1 ChimeraX-ButtonPanel: 1.0 ChimeraX-CageBuilder: 1.0 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.1 ChimeraX-ChemGroup: 2.0 ChimeraX-Clashes: 2.1 ChimeraX-ColorActions: 1.0 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.2.1 ChimeraX-CommandLine: 1.1.4 ChimeraX-ConnectStructure: 2.0 ChimeraX-Contacts: 1.0 ChimeraX-Core: 1.2.5 ChimeraX-CoreFormats: 1.0 ChimeraX-coulombic: 1.1.1 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0 ChimeraX-DataFormats: 1.1 ChimeraX-Dicom: 1.0 ChimeraX-DistMonitor: 1.1.3 ChimeraX-DistUI: 1.0 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ExperimentalCommands: 1.0 ChimeraX-FileHistory: 1.0 ChimeraX-FunctionKey: 1.0 ChimeraX-Geometry: 1.1 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.0 ChimeraX-Hbonds: 2.1 ChimeraX-Help: 1.1 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.0 ChimeraX-ImageFormats: 1.1 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-Label: 1.0 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.1 ChimeraX-Map: 1.0.2 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0 ChimeraX-MapFilter: 2.0 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.0 ChimeraX-Markers: 1.0 ChimeraX-Mask: 1.0 ChimeraX-MatchMaker: 1.2.1 ChimeraX-MDcrds: 2.2 ChimeraX-MedicalToolbar: 1.0.1 ChimeraX-Meeting: 1.0 ChimeraX-MLP: 1.1 ChimeraX-mmCIF: 2.3 ChimeraX-MMTF: 2.1 ChimeraX-Modeller: 1.0.1 ChimeraX-ModelPanel: 1.0.1 ChimeraX-ModelSeries: 1.0 ChimeraX-Mol2: 2.0 ChimeraX-Morph: 1.0 ChimeraX-MouseModes: 1.1 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nucleotides: 2.0.1 ChimeraX-OpenCommand: 1.5 ChimeraX-PDB: 2.4.1 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.1 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.0.1 ChimeraX-PubChem: 2.0.1 ChimeraX-ReadPbonds: 1.0 ChimeraX-Registration: 1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-ResidueFit: 1.0 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 2.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.4 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0 ChimeraX-SeqView: 2.3 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0 ChimeraX-Shortcuts: 1.0 ChimeraX-ShowAttr: 1.0 ChimeraX-ShowSequences: 1.0 ChimeraX-SideView: 1.0 ChimeraX-Smiles: 2.0.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.3.1 ChimeraX-STL: 1.0 ChimeraX-Storm: 1.0 ChimeraX-Struts: 1.0 ChimeraX-Surface: 1.0 ChimeraX-SwapAA: 2.0 ChimeraX-SwapRes: 2.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.0.1 ChimeraX-ToolshedUtils: 1.2 ChimeraX-Tug: 1.0 ChimeraX-UI: 1.7.6 ChimeraX-uniprot: 2.1 ChimeraX-UnitCell: 1.0 ChimeraX-ViewDockX: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0 ChimeraX-WebServices: 1.0 ChimeraX-Zone: 1.0 colorama: 0.4.3 comtypes: 1.1.7 cxservices: 1.0 cycler: 0.10.0 Cython: 0.29.21 decorator: 5.0.9 distlib: 0.3.1 docutils: 0.16 filelock: 3.0.12 funcparserlib: 0.3.6 grako: 3.16.5 h5py: 2.10.0 html2text: 2020.1.16 idna: 2.10 ihm: 0.17 imagecodecs: 2020.5.30 imagesize: 1.2.0 ipykernel: 5.3.4 ipython: 7.18.1 ipython-genutils: 0.2.0 jedi: 0.17.2 Jinja2: 2.11.2 jupyter-client: 6.1.7 jupyter-core: 4.7.1 kiwisolver: 1.3.1 line-profiler: 2.1.2 lxml: 4.6.2 lz4: 3.1.0 MarkupSafe: 2.0.1 matplotlib: 3.3.2 msgpack: 1.0.0 netCDF4: 1.5.4 networkx: 2.5 numexpr: 2.7.3 numpy: 1.19.2 numpydoc: 1.1.0 openvr: 1.14.1501 packaging: 20.9 ParmEd: 3.2.0 parso: 0.7.1 pickleshare: 0.7.5 Pillow: 7.2.0 pip: 21.0.1 pkginfo: 1.5.0.1 prompt-toolkit: 3.0.18 psutil: 5.7.2 pycollada: 0.7.1 pydicom: 2.0.0 Pygments: 2.7.1 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 2.4.7 PyQt5-commercial: 5.15.2 PyQt5-sip: 12.8.1 PyQtWebEngine-commercial: 5.15.2 python-dateutil: 2.8.1 pytz: 2021.1 pywin32: 228 pyzmq: 22.0.3 qtconsole: 4.7.7 QtPy: 1.9.0 RandomWords: 0.3.0 requests: 2.24.0 scipy: 1.5.2 setuptools: 50.3.2 sfftk-rw: 0.6.7.dev1 six: 1.15.0 snowballstemmer: 2.1.0 sortedcontainers: 2.2.2 Sphinx: 3.2.1 sphinxcontrib-applehelp: 1.0.2 sphinxcontrib-blockdiag: 2.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 suds-jurko: 0.6 tables: 3.6.1 tifffile: 2020.9.3 tinyarray: 1.2.3 tornado: 6.1 traitlets: 5.0.5 urllib3: 1.25.11 wcwidth: 0.2.5 webcolors: 1.11.1 wheel: 0.36.0 wheel-filename: 1.3.0 WMI: 1.5.1 }}} " defect closed normal Core can't reproduce all ChimeraX