id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 5382 Crash removing destroyed tool/dock widget ypan@… Eric Pettersen "{{{ The following bug report has been submitted: Platform: macOS-10.15.1-x86_64-i386-64bit ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Process: ChimeraX [865] Path: /Volumes/VOLUME/*/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX Identifier: ChimeraX Version: ??? Code Type: X86-64 (Native) Parent Process: ??? [1] Responsible: ChimeraX [865] User ID: 501 Date/Time: 2021-10-05 13:25:45.413 -0400 OS Version: Mac OS X 10.15.1 (19B88) Report Version: 12 Anonymous UUID: 299A81BA-FCEC-2544-0B63-D5953C7D7032 Sleep/Wake UUID: 8CA55317-BE84-4023-BD97-2A9571906F5C Time Awake Since Boot: 12000 seconds Time Since Wake: 1000 seconds System Integrity Protection: enabled Notes: Translocated Process Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread Exception Type: EXC_BAD_ACCESS (SIGSEGV) Exception Codes: KERN_INVALID_ADDRESS at 0x00005689215e17e8 Exception Note: EXC_CORPSE_NOTIFY VM Regions Near 0x5689215e17e8: VM_ALLOCATE 000000016395f000-0000000164acd000 [ 17.4M] rw-/rwx SM=PRV --> MALLOC_NANO 0000600000000000-0000600008000000 [128.0M] rw-/rwx SM=PRV Application Specific Information: Calling windowShouldClose: on the delegate for the QNSPanel 0x7f80f6652150 Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread 0 libsystem_kernel.dylib 0x00007fff696b849a __pthread_kill + 10 1 libsystem_pthread.dylib 0x00007fff697756cb pthread_kill + 384 2 libsystem_c.dylib 0x00007fff695d03a2 raise + 26 3 libsystem_platform.dylib 0x00007fff6976ab1d _sigtramp + 29 4 ??? 000000000000000000 0 + 0 5 QtWidgets 0x0000000111835741 QMainWindow::removeDockWidget(QDockWidget*) + 33 6 QtWidgets.abi3.so 0x000000011130f29f meth_QMainWindow_removeDockWidget(_object*, _object*) + 95 7 org.python.python 0x00000001062f40c2 cfunction_call_varargs + 290 8 org.python.python 0x00000001062f3a85 _PyObject_MakeTpCall + 373 9 org.python.python 0x00000001063c2665 call_function + 533 10 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678 11 org.python.python 0x00000001062f43d0 function_code_fastcall + 128 12 org.python.python 0x00000001063c260c call_function + 444 13 org.python.python 0x00000001063bf44a _PyEval_EvalFrameDefault + 25642 14 org.python.python 0x00000001062f43d0 function_code_fastcall + 128 15 org.python.python 0x00000001063c260c call_function + 444 16 org.python.python 0x00000001063bf44a _PyEval_EvalFrameDefault + 25642 17 org.python.python 0x00000001062f43d0 function_code_fastcall + 128 18 org.python.python 0x00000001062f6a9a method_vectorcall + 170 19 org.python.python 0x00000001063c260c call_function + 444 20 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678 21 org.python.python 0x00000001062f43d0 function_code_fastcall + 128 22 org.python.python 0x00000001062f6a9a method_vectorcall + 170 23 org.python.python 0x00000001063c260c call_function + 444 24 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678 25 org.python.python 0x00000001062f43d0 function_code_fastcall + 128 26 org.python.python 0x00000001063c260c call_function + 444 27 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678 28 org.python.python 0x00000001062f43d0 function_code_fastcall + 128 29 org.python.python 0x00000001063c260c call_function + 444 30 org.python.python 0x00000001063bf44a _PyEval_EvalFrameDefault + 25642 31 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804 32 org.python.python 0x00000001062f456e _PyFunction_Vectorcall + 270 33 org.python.python 0x00000001062f6a9a method_vectorcall + 170 34 org.python.python 0x00000001063c260c call_function + 444 35 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678 36 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804 37 org.python.python 0x00000001062f456e _PyFunction_Vectorcall + 270 38 org.python.python 0x00000001062f3dad PyVectorcall_Call + 109 39 sip.cpython-38-darwin.so 0x00000001110aa9d7 sip_api_call_procedure_method + 199 40 QtWidgets.abi3.so 0x000000011125e688 sipQDockWidget::closeEvent(QCloseEvent*) + 104 41 QtWidgets 0x00000001117220f9 QWidget::event(QEvent*) + 1209 42 QtWidgets 0x0000000111800d27 QDockWidget::event(QEvent*) + 791 43 QtWidgets.abi3.so 0x000000011125d67f sipQDockWidget::event(QEvent*) + 191 44 QtWidgets 0x00000001116e79ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266 45 QtWidgets 0x00000001116e8e11 QApplication::notify(QObject*, QEvent*) + 497 46 QtWidgets.abi3.so 0x000000011129adb9 sipQApplication::notify(QObject*, QEvent*) + 233 47 QtCore 0x0000000110a48a34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212 48 QtWidgets 0x0000000111710fd5 QWidgetPrivate::close_helper(QWidgetPrivate::CloseMode) + 165 49 QtWidgets 0x000000011173f86d QWidgetWindow::event(QEvent*) + 621 50 QtWidgets 0x00000001116e79ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266 51 QtWidgets 0x00000001116e8e11 QApplication::notify(QObject*, QEvent*) + 497 52 QtWidgets.abi3.so 0x000000011129adb9 sipQApplication::notify(QObject*, QEvent*) + 233 53 QtCore 0x0000000110a48a34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212 54 QtGui 0x0000000113dacb9e QGuiApplicationPrivate::processWindowSystemEvent(QWindowSystemInterfacePrivate::WindowSystemEvent*) + 2494 55 QtGui 0x0000000113d8d8f3 bool QWindowSystemInterfacePrivate::handleWindowSystemEvent(QWindowSystemInterfacePrivate::WindowSystemEvent*) + 115 56 libqcocoa.dylib 0x000000012185574e QCocoaWindow::windowShouldClose() + 190 57 libqcocoa.dylib 0x000000012186a5c5 -[QNSWindowDelegate windowShouldClose:] + 69 58 com.apple.AppKit 0x00007fff2f5db9de __19-[NSWindow __close]_block_invoke + 181 59 com.apple.AppKit 0x00007fff2f5db91c -[NSWindow __close] + 292 60 com.apple.AppKit 0x00007fff2f5078d4 -[NSApplication(NSResponder) sendAction:to:from:] + 299 61 com.apple.AppKit 0x00007fff2f567084 -[NSControl sendAction:to:] + 86 62 com.apple.AppKit 0x00007fff2f566fb6 __26-[NSCell _sendActionFrom:]_block_invoke + 136 63 com.apple.AppKit 0x00007fff2f566eb8 -[NSCell _sendActionFrom:] + 171 64 com.apple.AppKit 0x00007fff2f58f423 -[NSButtonCell _sendActionFrom:] + 96 65 com.apple.AppKit 0x00007fff2f8fc39c NSControlTrackMouse + 1745 66 com.apple.AppKit 0x00007fff2f5658d4 -[NSCell trackMouse:inRect:ofView:untilMouseUp:] + 130 67 com.apple.AppKit 0x00007fff2f58f18c -[NSButtonCell trackMouse:inRect:ofView:untilMouseUp:] + 691 68 com.apple.AppKit 0x00007fff2f564b6b -[NSControl mouseDown:] + 748 69 com.apple.AppKit 0x00007fff2f5c4787 -[_NSThemeWidget mouseDown:] + 86 70 com.apple.AppKit 0x00007fff2f4575e9 -[NSWindow(NSEventRouting) _handleMouseDownEvent:isDelayedEvent:] + 4907 71 com.apple.AppKit 0x00007fff2f39aeb0 -[NSWindow(NSEventRouting) _reallySendEvent:isDelayedEvent:] + 2612 72 com.apple.AppKit 0x00007fff2f39a23d -[NSWindow(NSEventRouting) sendEvent:] + 349 73 libqcocoa.dylib 0x0000000121869df5 -[QNSPanel sendEvent:] + 549 74 com.apple.AppKit 0x00007fff2f25e45c -[NSApplication(NSEvent) sendEvent:] + 352 75 libqcocoa.dylib 0x000000012187012a -[QNSApplication sendEvent:] + 74 76 com.apple.AppKit 0x00007fff2f24dda7 -[NSApplication run] + 707 77 libqcocoa.dylib 0x000000012186c62f QCocoaEventDispatcher::processEvents(QFlags) + 2495 78 QtCore 0x0000000110a44acf QEventLoop::exec(QFlags) + 431 79 QtCore 0x0000000110a49042 QCoreApplication::exec() + 130 80 QtWidgets.abi3.so 0x000000011138c702 meth_QApplication_exec_(_object*, _object*) + 82 81 org.python.python 0x00000001062f40c2 cfunction_call_varargs + 290 82 org.python.python 0x00000001062f3a85 _PyObject_MakeTpCall + 373 83 org.python.python 0x00000001063c2665 call_function + 533 84 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678 85 org.python.python 0x00000001062f43d0 function_code_fastcall + 128 86 org.python.python 0x00000001062f6a9a method_vectorcall + 170 87 org.python.python 0x00000001063c260c call_function + 444 88 org.python.python 0x00000001063bf46e _PyEval_EvalFrameDefault + 25678 89 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804 90 org.python.python 0x00000001062f456e _PyFunction_Vectorcall + 270 91 org.python.python 0x00000001063c260c call_function + 444 92 org.python.python 0x00000001063bf505 _PyEval_EvalFrameDefault + 25829 93 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804 94 org.python.python 0x00000001063b8f44 PyEval_EvalCode + 100 95 org.python.python 0x00000001063b6332 builtin_exec + 626 96 org.python.python 0x00000001063305ff cfunction_vectorcall_FASTCALL + 175 97 org.python.python 0x00000001063c260c call_function + 444 98 org.python.python 0x00000001063bf505 _PyEval_EvalFrameDefault + 25829 99 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804 100 org.python.python 0x00000001062f456e _PyFunction_Vectorcall + 270 101 org.python.python 0x00000001063c260c call_function + 444 102 org.python.python 0x00000001063bf505 _PyEval_EvalFrameDefault + 25829 103 org.python.python 0x00000001063c3454 _PyEval_EvalCodeWithName + 2804 104 org.python.python 0x00000001062f456e _PyFunction_Vectorcall + 270 105 org.python.python 0x00000001062f3dad PyVectorcall_Call + 109 106 org.python.python 0x0000000106425eb3 pymain_run_module + 195 107 org.python.python 0x0000000106425585 Py_RunMain + 1413 108 org.python.python 0x0000000106425bdf pymain_main + 223 109 org.python.python 0x0000000106425aeb Py_Main + 43 110 edu.ucsf.cgl.ChimeraX 0x00000001062cadc8 main + 120 111 libdyld.dylib 0x00007fff695692e5 start + 1 Thread 1:: ThreadPoolServiceThread 0 libsystem_kernel.dylib 0x00007fff696ba2da kevent64 + 10 1 QtWebEngineCore 0x0000000117069e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330 2 QtWebEngineCore 0x0000000117069cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167 3 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139 4 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395 5 QtWebEngineCore 0x0000000116ffda94 base::internal::ServiceThread::Run(base::RunLoop*) + 20 6 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413 7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 2:: ThreadPoolBackgroundWorker 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x0000000117007778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56 4 QtWebEngineCore 0x0000000117008150 base::internal::WorkerThread::RunWorker() + 1024 5 QtWebEngineCore 0x0000000117007c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20 6 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 7 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 8 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 3:: Chrome_IOThread 0 libsystem_kernel.dylib 0x00007fff696ba2da kevent64 + 10 1 QtWebEngineCore 0x0000000117069e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330 2 QtWebEngineCore 0x0000000117069cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167 3 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139 4 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395 5 QtWebEngineCore 0x000000011af36f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102 6 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413 7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 4:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31 4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171 5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139 6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395 7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413 8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 5:: CompositorTileWorker1 0 libsystem_kernel.dylib 0x00007fff696b5916 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff69776040 _pthread_cond_wait + 701 2 QtWebEngineCore 0x0000000117056e18 base::ConditionVariable::Wait() + 104 3 QtWebEngineCore 0x000000011830e5f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56 4 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 5 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 6 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 6:: Chrome_InProcGpuThread 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x0000000116f8720f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223 4 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139 5 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395 6 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413 7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 7:: Chrome_ChildIOThread 0 libsystem_kernel.dylib 0x00007fff696ba2da kevent64 + 10 1 QtWebEngineCore 0x0000000117069e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330 2 QtWebEngineCore 0x0000000117069cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167 3 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139 4 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395 5 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413 6 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 7 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 8 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 8:: VizCompositorThread 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31 4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171 5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139 6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395 7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413 8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 9:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31 4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171 5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139 6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395 7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413 8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 10:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31 4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171 5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139 6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395 7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413 8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 11:: ThreadPoolSingleThreadForegroundBlocking0 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31 4 QtWebEngineCore 0x000000011700776a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42 5 QtWebEngineCore 0x0000000117008150 base::internal::WorkerThread::RunWorker() + 1024 6 QtWebEngineCore 0x0000000117007d34 base::internal::WorkerThread::RunDedicatedWorker() + 20 7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 12:: MemoryInfra 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31 4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171 5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139 6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395 7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413 8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 13:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31 4 QtWebEngineCore 0x0000000116f871db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171 5 QtWebEngineCore 0x0000000116ff262b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139 6 QtWebEngineCore 0x0000000116fb67cb base::RunLoop::Run() + 395 7 QtWebEngineCore 0x0000000117011a7d base::Thread::ThreadMain() + 413 8 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 9 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 10 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 14:: com.apple.NSEventThread 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff3204936b __CFRunLoopServiceMachPort + 322 3 com.apple.CoreFoundation 0x00007fff32048907 __CFRunLoopRun + 1695 4 com.apple.CoreFoundation 0x00007fff32047fe3 CFRunLoopRunSpecific + 499 5 com.apple.AppKit 0x00007fff2f25bdba _NSEventThread + 132 6 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 7 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 15:: ThreadPoolSingleThreadSharedBackgroundBlocking1 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31 4 QtWebEngineCore 0x000000011700776a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42 5 QtWebEngineCore 0x0000000117007e3d base::internal::WorkerThread::RunWorker() + 237 6 QtWebEngineCore 0x0000000117007c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20 7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 16:: ThreadPoolSingleThreadSharedForeground2 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x000000011705f2cf base::WaitableEvent::Wait() + 31 4 QtWebEngineCore 0x000000011700776a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42 5 QtWebEngineCore 0x0000000117008150 base::internal::WorkerThread::RunWorker() + 1024 6 QtWebEngineCore 0x0000000117007d04 base::internal::WorkerThread::RunSharedWorker() + 20 7 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 8 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 9 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 17: 0 libsystem_kernel.dylib 0x00007fff696b5916 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff69776040 _pthread_cond_wait + 701 2 libopenblas.0.dylib 0x000000015ab182eb blas_thread_server + 619 3 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 4 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 18: 0 libsystem_kernel.dylib 0x00007fff696b5916 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff69776040 _pthread_cond_wait + 701 2 libopenblas.0.dylib 0x0000000107e3527b blas_thread_server + 507 3 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 4 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 19:: ThreadPoolForegroundWorker 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 QtWebEngineCore 0x000000011705f492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434 3 QtWebEngineCore 0x0000000117007778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56 4 QtWebEngineCore 0x0000000117008150 base::internal::WorkerThread::RunWorker() + 1024 5 QtWebEngineCore 0x0000000117007cd4 base::internal::WorkerThread::RunPooledWorker() + 20 6 QtWebEngineCore 0x000000011705ae07 base::(anonymous namespace)::ThreadFunc(void*) + 87 7 libsystem_pthread.dylib 0x00007fff69775d36 _pthread_start + 125 8 libsystem_pthread.dylib 0x00007fff6977258f thread_start + 15 Thread 20: 0 libsystem_pthread.dylib 0x00007fff6977256c start_wqthread + 0 Thread 21:: Dispatch queue: com.apple.root.user-interactive-qos 0 libsystem_kernel.dylib 0x00007fff696b2166 mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff696b26cc mach_msg + 60 2 com.apple.QuartzCore 0x00007fff3d9c5eb3 CA::CA_BLOCKED_WAITING_FOR_CLIENT_FENCES(unsigned int, unsigned long) + 170 3 com.apple.QuartzCore 0x00007fff3d9c6a2a CA::Context::commit_transaction(CA::Transaction*, double) + 1906 4 com.apple.QuartzCore 0x00007fff3d89075e CA::Transaction::commit() + 638 5 com.apple.AppKit 0x00007fff2f284ed4 NSPerformVisuallyAtomicChange + 154 6 com.apple.AppKit 0x00007fff2f500012 __42-[NSAnimation(NSInternal) _runInNewThread]_block_invoke + 80 7 libdispatch.dylib 0x00007fff69518583 _dispatch_call_block_and_release + 12 8 libdispatch.dylib 0x00007fff6951950e _dispatch_client_callout + 8 9 libdispatch.dylib 0x00007fff69527933 _dispatch_root_queue_drain + 663 10 libdispatch.dylib 0x00007fff69527f22 _dispatch_worker_thread2 + 92 11 libsystem_pthread.dylib 0x00007fff697726d5 _pthread_wqthread + 220 12 libsystem_pthread.dylib 0x00007fff6977257b start_wqthread + 15 Thread 22: 0 libsystem_pthread.dylib 0x00007fff6977256c start_wqthread + 0 Thread 0 crashed with X86 Thread State (64-bit): rax: 0x0000000000000000 rbx: 0x0000000112206dc0 rcx: 0x00000001067ada58 rdx: 0x0000000000000000 rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00000001067ada80 rsp: 0x00000001067ada58 r8: 0x00000001067adf48 r9: 0x788ede42d5acaaad r10: 0x0000000112206e6c r11: 0x0000000000000246 r12: 0x0000000000000307 r13: 0x0000000150a9ea60 r14: 0x000000000000000b r15: 0x0000000000000016 rip: 0x00007fff696b849a rfl: 0x0000000000000246 cr2: 0x000000010650a7e0 Logical CPU: 0 Error Code: 0x02000148 Trap Number: 133 Binary Images: 0x1062ca000 - 0x1062caff3 +edu.ucsf.cgl.ChimeraX (1.2.5 - 1.2.5.0) /var/folders/*/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX 0x1062d3000 - 0x106509ff7 +org.python.python (3.8.8, [c] 2001-2019 Python Software Foundation. - 3.8.8) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/Python 0x106933000 - 0x106935ff7 +_heapq.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_heapq.cpython-38-darwin.so 0x106a3d000 - 0x106a42ff7 +zlib.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/zlib.cpython-38-darwin.so 0x106a4c000 - 0x106a4eff7 +_bz2.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_bz2.cpython-38-darwin.so 0x106a57000 - 0x106a88fff +_lzma.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_lzma.cpython-38-darwin.so 0x106a97000 - 0x106a98ff7 +grp.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/grp.cpython-38-darwin.so 0x106ae0000 - 0x106ae8fff +math.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/math.cpython-38-darwin.so 0x106af4000 - 0x106af5ff7 +_bisect.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_bisect.cpython-38-darwin.so 0x106afd000 - 0x106b01ff7 +_sha512.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_sha512.cpython-38-darwin.so 0x106b0a000 - 0x106b0bff7 +_random.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_random.cpython-38-darwin.so 0x106c6e000 - 0x106c73fff +_json.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_json.cpython-38-darwin.so 0x106c7d000 - 0x106c91ff7 +_ssl.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_ssl.cpython-38-darwin.so 0x106caa000 - 0x106d02fff +libssl.1.1.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/libssl.1.1.dylib 0x106d31000 - 0x106f47da7 +libcrypto.1.1.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/libcrypto.1.1.dylib 0x106fe5000 - 0x106ff2fff +_socket.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_socket.cpython-38-darwin.so 0x10707f000 - 0x107082ff7 +select.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/select.cpython-38-darwin.so 0x10708c000 - 0x107091fff +_struct.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_struct.cpython-38-darwin.so 0x10709e000 - 0x1070a2fff +binascii.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/binascii.cpython-38-darwin.so 0x1070eb000 - 0x1070eeff7 +_hashlib.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_hashlib.cpython-38-darwin.so 0x1070f8000 - 0x1070fefff +_blake2.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_blake2.cpython-38-darwin.so 0x107108000 - 0x107118fff +_sha3.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_sha3.cpython-38-darwin.so 0x1071a2000 - 0x1071b1fff +_datetime.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_datetime.cpython-38-darwin.so 0x107242000 - 0x107242ff7 +_scproxy.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_scproxy.cpython-38-darwin.so 0x10724a000 - 0x107293fff +_decimal.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_decimal.cpython-38-darwin.so 0x1072b2000 - 0x1072dbfff +pyexpat.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/pyexpat.cpython-38-darwin.so 0x107334000 - 0x107335fff +_queue.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_queue.cpython-38-darwin.so 0x1073d8000 - 0x1073dcff3 +_graphics.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/graphics/_graphics.cpython-38-darwin.so 0x107436000 - 0x10743dfff +libqgif.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/PyQt5/Qt/plugins/imageformats/libqgif.dylib 0x107446000 - 0x107449047 libobjc-trampolines.dylib (781) /usr/lib/libobjc-trampolines.dylib 0x10744f000 - 0x107465ff7 +_pickle.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_pickle.cpython-38-darwin.so 0x1074c6000 - 0x1074caff7 +_csv.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_csv.cpython-38-darwin.so 0x107514000 - 0x107515fff +_posixsubprocess.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_posixsubprocess.cpython-38-darwin.so 0x10765f000 - 0x1079d4feb +_multiarray_umath.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/core/_multiarray_umath.cpython-38-darwin.so 0x107afc000 - 0x10b5539bf +libopenblas.0.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/.dylibs/libopenblas.0.dylib 0x10b848000 - 0x10b95fff7 +libgfortran.3.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/.dylibs/libgfortran.3.dylib 0x10b9cd000 - 0x10ba03fff +libquadmath.0.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/.dylibs/libquadmath.0.dylib 0x10ba17000 - 0x10ba2cff7 +libgcc_s.1.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/.dylibs/libgcc_s.1.dylib 0x10dbb9000 - 0x10dbc6ff7 +_multiarray_tests.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/core/_multiarray_tests.cpython-38-darwin.so 0x10dc1c000 - 0x10dc2dfff +_ctypes.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_ctypes.cpython-38-darwin.so 0x10dc84000 - 0x10dc85ffb +lapack_lite.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/linalg/lapack_lite.cpython-38-darwin.so 0x10dc8d000 - 0x10dca6ffb +_umath_linalg.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/linalg/_umath_linalg.cpython-38-darwin.so 0x10dd7a000 - 0x10dd8bfff +_pocketfft_internal.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/fft/_pocketfft_internal.cpython-38-darwin.so 0x10ddd4000 - 0x10de3fff7 +mtrand.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/mtrand.cpython-38-darwin.so 0x10de9a000 - 0x10deb8ff3 +bit_generator.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/bit_generator.cpython-38-darwin.so 0x10ded9000 - 0x10df0bff3 +_common.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_common.cpython-38-darwin.so 0x10df68000 - 0x10dfb7ff3 +_bounded_integers.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_bounded_integers.cpython-38-darwin.so 0x10dfde000 - 0x10dfecff3 +_mt19937.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_mt19937.cpython-38-darwin.so 0x10dffd000 - 0x10e009ff7 +_philox.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_philox.cpython-38-darwin.so 0x10e019000 - 0x10e022ffb +_pcg64.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_pcg64.cpython-38-darwin.so 0x10e031000 - 0x10e038ff3 +_sfc64.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_sfc64.cpython-38-darwin.so 0x10e045000 - 0x10e0c6ffb +_generator.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/numpy/random/_generator.cpython-38-darwin.so 0x10e126000 - 0x10e12dffb +libqicns.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/PyQt5/Qt/plugins/imageformats/libqicns.dylib 0x10e137000 - 0x10e13cfff +libqico.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/PyQt5/Qt/plugins/imageformats/libqico.dylib 0x10e146000 - 0x10e14cffb +libqmacheif.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/PyQt5/Qt/plugins/imageformats/libqmacheif.dylib 0x11025b000 - 0x11025bfff +_arrays.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/arrays/_arrays.cpython-38-darwin.so 0x110262000 - 0x110303ff7 +libarrays.dylib (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/arrays/lib/libarrays.dylib 0x110427000 - 0x110445ff3 +_geometry.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/geometry/_geometry.cpython-38-darwin.so 0x1104da000 - 0x1104dafff +_opcode.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/lib-dynload/_opcode.cpython-38-darwin.so 0x110562000 - 0x1106c1ff7 +QtCore.abi3.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/PyQt5/QtCore.abi3.so 0x110850000 - 0x110dc07df +QtCore (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/PyQt5/Qt/lib/QtCore.framework/Versions/5/QtCore 0x1110a2000 - 0x1110b9ff7 +sip.cpython-38-darwin.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/PyQt5/sip.cpython-38-darwin.so 0x111150000 - 0x1113e0ff7 +QtWidgets.abi3.so (0) /var/folders/*/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/PyQt5/QtWidgets.abi3.so 0x1116d7000 - 0x111b1dfff +QtWidgets (0) 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0x7fff674e0fff liblangid.dylib (133) /usr/lib/liblangid.dylib 0x7fff674e1000 - 0x7fff674f9ffb liblzma.5.dylib (16) /usr/lib/liblzma.5.dylib 0x7fff67511000 - 0x7fff675b8fff libmecab.dylib (883) /usr/lib/libmecab.dylib 0x7fff675b9000 - 0x7fff67819ff9 libmecabra.dylib (883) /usr/lib/libmecabra.dylib 0x7fff67b85000 - 0x7fff67bb4ff7 libncurses.5.4.dylib (57) /usr/lib/libncurses.5.4.dylib 0x7fff67ce3000 - 0x7fff68155ff4 libnetwork.dylib (1880.40.26) /usr/lib/libnetwork.dylib 0x7fff68156000 - 0x7fff6816cfff libnetworkextension.dylib (1095.40.22) /usr/lib/libnetworkextension.dylib 0x7fff681f4000 - 0x7fff68225ff6 libobjc.A.dylib (781) /usr/lib/libobjc.A.dylib 0x7fff68226000 - 0x7fff68227ff7 libodfde.dylib (26) /usr/lib/libodfde.dylib 0x7fff68238000 - 0x7fff6823cfff libpam.2.dylib (25) /usr/lib/libpam.2.dylib 0x7fff6823f000 - 0x7fff68272ff7 libpcap.A.dylib (89.40.2) /usr/lib/libpcap.A.dylib 0x7fff682b0000 - 0x7fff682beff9 libperfcheck.dylib (37) /usr/lib/libperfcheck.dylib 0x7fff682bf000 - 0x7fff682c2ff3 libpmenergy.dylib (214.40.1) /usr/lib/libpmenergy.dylib 0x7fff682c3000 - 0x7fff682c5fff libpmsample.dylib (214.40.1) /usr/lib/libpmsample.dylib 0x7fff682f4000 - 0x7fff6830cfff libresolv.9.dylib (67.40.1) /usr/lib/libresolv.9.dylib 0x7fff6830e000 - 0x7fff68352ff7 libsandbox.1.dylib (1217.41.1) /usr/lib/libsandbox.1.dylib 0x7fff68353000 - 0x7fff68365fff libsasl2.2.dylib (213) /usr/lib/libsasl2.2.dylib 0x7fff68366000 - 0x7fff68367ff7 libspindump.dylib (281.1) /usr/lib/libspindump.dylib 0x7fff68368000 - 0x7fff68555ff7 libsqlite3.dylib (308.4) /usr/lib/libsqlite3.dylib 0x7fff68649000 - 0x7fff68676ffb libssl.46.dylib (47.11.1) /usr/lib/libssl.46.dylib 0x7fff6874a000 - 0x7fff687a5ff0 libusrtcp.dylib (1880.40.26) /usr/lib/libusrtcp.dylib 0x7fff687a6000 - 0x7fff687a9ffb libutil.dylib (57) /usr/lib/libutil.dylib 0x7fff687aa000 - 0x7fff687b7fff libxar.1.dylib (420) /usr/lib/libxar.1.dylib 0x7fff687bd000 - 0x7fff6889fff7 libxml2.2.dylib (32.12) /usr/lib/libxml2.2.dylib 0x7fff688a3000 - 0x7fff688cbfff libxslt.1.dylib (16.7) /usr/lib/libxslt.1.dylib 0x7fff688cc000 - 0x7fff688defff libz.1.dylib (76) /usr/lib/libz.1.dylib 0x7fff69344000 - 0x7fff69349ff7 libcache.dylib (83) /usr/lib/system/libcache.dylib 0x7fff6934a000 - 0x7fff69355ff7 libcommonCrypto.dylib (60165) /usr/lib/system/libcommonCrypto.dylib 0x7fff69356000 - 0x7fff6935dfff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib 0x7fff6935e000 - 0x7fff69367fff libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib 0x7fff69368000 - 0x7fff693fffef libcorecrypto.dylib (866.40.8) /usr/lib/system/libcorecrypto.dylib 0x7fff69516000 - 0x7fff69557ff0 libdispatch.dylib (1173.40.5) /usr/lib/system/libdispatch.dylib 0x7fff69558000 - 0x7fff6958dfff libdyld.dylib (733.6) /usr/lib/system/libdyld.dylib 0x7fff6958e000 - 0x7fff6958effb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib 0x7fff6958f000 - 0x7fff6959bff7 libkxld.dylib (6153.41.3) /usr/lib/system/libkxld.dylib 0x7fff6959c000 - 0x7fff6959cff7 liblaunch.dylib (1738.40.10) /usr/lib/system/liblaunch.dylib 0x7fff6959d000 - 0x7fff695a2ff7 libmacho.dylib (949.0.1) /usr/lib/system/libmacho.dylib 0x7fff695a3000 - 0x7fff695a5ff3 libquarantine.dylib (110.40.3) /usr/lib/system/libquarantine.dylib 0x7fff695a6000 - 0x7fff695a7ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib 0x7fff695a8000 - 0x7fff695bffff libsystem_asl.dylib (377.40.1) /usr/lib/system/libsystem_asl.dylib 0x7fff695c0000 - 0x7fff695c0fff libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib 0x7fff695c1000 - 0x7fff69648ff7 libsystem_c.dylib (1353.41.1) /usr/lib/system/libsystem_c.dylib 0x7fff69649000 - 0x7fff6964cfff libsystem_configuration.dylib (1061.40.2) /usr/lib/system/libsystem_configuration.dylib 0x7fff6964d000 - 0x7fff69650ff7 libsystem_coreservices.dylib (114) /usr/lib/system/libsystem_coreservices.dylib 0x7fff69651000 - 0x7fff69658fff libsystem_darwin.dylib (1353.41.1) /usr/lib/system/libsystem_darwin.dylib 0x7fff69659000 - 0x7fff69660ffb libsystem_dnssd.dylib (1096.40.7) /usr/lib/system/libsystem_dnssd.dylib 0x7fff69661000 - 0x7fff69662ffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib 0x7fff69663000 - 0x7fff696b0ff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib 0x7fff696b1000 - 0x7fff696ddff7 libsystem_kernel.dylib (6153.41.3) /usr/lib/system/libsystem_kernel.dylib 0x7fff696de000 - 0x7fff69725ff7 libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib 0x7fff69726000 - 0x7fff6974dff7 libsystem_malloc.dylib (283.40.1) /usr/lib/system/libsystem_malloc.dylib 0x7fff6974e000 - 0x7fff6975bff3 libsystem_networkextension.dylib (1095.40.22) /usr/lib/system/libsystem_networkextension.dylib 0x7fff6975c000 - 0x7fff69765fff libsystem_notify.dylib (241) /usr/lib/system/libsystem_notify.dylib 0x7fff69766000 - 0x7fff6976ffe7 libsystem_platform.dylib (220) /usr/lib/system/libsystem_platform.dylib 0x7fff69770000 - 0x7fff6977aff7 libsystem_pthread.dylib (416.40.3) /usr/lib/system/libsystem_pthread.dylib 0x7fff6977b000 - 0x7fff6977fffb libsystem_sandbox.dylib (1217.41.1) /usr/lib/system/libsystem_sandbox.dylib 0x7fff69780000 - 0x7fff69782fff libsystem_secinit.dylib (62.40.2) /usr/lib/system/libsystem_secinit.dylib 0x7fff69783000 - 0x7fff6978affb libsystem_symptoms.dylib (1238.40.4) /usr/lib/system/libsystem_symptoms.dylib 0x7fff6978b000 - 0x7fff697a1ff2 libsystem_trace.dylib (1147.40.13) /usr/lib/system/libsystem_trace.dylib 0x7fff697a3000 - 0x7fff697a8ffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib 0x7fff697a9000 - 0x7fff697ddff6 libxpc.dylib (1738.40.10) /usr/lib/system/libxpc.dylib External Modification Summary: Calls made by other processes targeting this process: task_for_pid: 21 thread_create: 0 thread_set_state: 0 Calls made by this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by all processes on this machine: task_for_pid: 6110 thread_create: 0 thread_set_state: 0 VM Region Summary: ReadOnly portion of Libraries: Total=1.0G resident=0K(0%) swapped_out_or_unallocated=1.0G(100%) Writable regions: Total=1.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.7G(100%) VIRTUAL REGION REGION TYPE SIZE COUNT (non-coalesced) =========== ======= ======= Accelerate framework 512K 4 Activity Tracing 256K 1 CG backing stores 248K 2 CG image 136K 25 CoreAnimation 132K 26 CoreGraphics 8K 1 CoreImage 24K 5 CoreUI image data 1372K 22 Foundation 24K 2 Kernel Alloc Once 8K 1 MALLOC 1.0G 1383 MALLOC guard page 32K 8 MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated) MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated) Mach message 24K 3 Memory Tag 242 12K 1 OpenGL GLSL 384K 5 STACK GUARD 88K 22 Stack 139.2M 23 Stack Guard 56.0M 1 VM_ALLOCATE 152.9M 154 VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated) __DATA 53.4M 615 __DATA_CONST 40K 4 __FONT_DATA 4K 1 __GLSLBUILTINS 5176K 1 __LINKEDIT 454.3M 183 __OBJC_RO 32.0M 1 __OBJC_RW 1780K 2 __TEXT 597.3M 562 __UNICODE 564K 1 mapped file 385.8M 47 shared memory 2852K 26 =========== ======= ======= TOTAL 3.3G 3135 TOTAL, minus reserved VM space 2.9G 3135 System Profile: Network Service: Wi-Fi, AirPort, en0 Thunderbolt Bus: MacBook Air, Apple Inc., 27.2 Boot Volume File System Type: apfs Memory Module: BANK 0/DIMM0, 2 GB, DDR3, 1600 MHz, 0x80AD, 0x483943434E4E4E384A544D4C41522D4E544D Memory Module: BANK 1/DIMM0, 2 GB, DDR3, 1600 MHz, 0x80AD, 0x483943434E4E4E384A544D4C41522D4E544D USB Device: USB 3.0 Bus USB Device: BRCM20702 Hub USB Device: Bluetooth USB Host Controller USB Device: Wireless Device Serial ATA Device: APPLE SSD SM0128G, 121.33 GB Model: MacBookAir7,2, BootROM 190.0.0.0.0, 2 processors, Dual-Core Intel Core i5, 1.6 GHz, 4 GB, SMC 2.27f2 Graphics: kHW_IntelHDGraphics6000Item, Intel HD Graphics 6000, spdisplays_builtin AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x117), Broadcom BCM43xx 1.0 (7.77.106.3 AirPortDriverBrcmNIC-1435.3) Bluetooth: Version 7.0.1f1, 3 services, 18 devices, 1 incoming serial ports Log: UCSF ChimeraX version: 1.2.5 (2021-05-24) © 2016-2021 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 INTEL-14.2.16 OpenGL renderer: Intel(R) HD Graphics 6000 OpenGL vendor: Intel Inc.Hardware: Hardware Overview: Model Name: MacBook Air Model Identifier: MacBookAir7,2 Processor Name: Dual-Core Intel Core i5 Processor Speed: 1.6 GHz Number of Processors: 1 Total Number of Cores: 2 L2 Cache (per Core): 256 KB L3 Cache: 3 MB Hyper-Threading Technology: Enabled Memory: 4 GB Boot ROM Version: 190.0.0.0.0 SMC Version (system): 2.27f2 Software: System Software Overview: System Version: macOS 10.15.1 (19B88) Kernel Version: Darwin 19.0.0 Time since boot: 6 days 4:02 Graphics/Displays: Intel HD Graphics 6000: Chipset Model: Intel HD Graphics 6000 Type: GPU Bus: Built-In VRAM (Dynamic, Max): 1536 MB Vendor: Intel Device ID: 0x1626 Revision ID: 0x0009 Metal: Supported, feature set macOS GPUFamily1 v4 Displays: Color LCD: Display Type: LCD Resolution: 1440 x 900 (Widescreen eXtended Graphics Array Plus) UI Looks like: 1440 x 900 Framebuffer Depth: 24-Bit Color (ARGB8888) Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: No Connection Type: Internal Locale: (None, 'UTF-8') PyQt5 5.15.2, Qt 5.15.2 Installed Packages: alabaster: 0.7.12 appdirs: 1.4.4 appnope: 0.1.2 Babel: 2.9.1 backcall: 0.2.0 blockdiag: 2.0.1 certifi: 2020.12.5 cftime: 1.5.0 chardet: 3.0.4 ChimeraX-AddCharge: 1.0.1 ChimeraX-AddH: 2.1.6 ChimeraX-AlignmentAlgorithms: 2.0 ChimeraX-AlignmentHdrs: 3.2 ChimeraX-AlignmentMatrices: 2.0 ChimeraX-Alignments: 2.1 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.0 ChimeraX-Atomic: 1.13.2 ChimeraX-AtomicLibrary: 3.1.3 ChimeraX-AtomSearch: 2.0 ChimeraX-AtomSearchLibrary: 1.0 ChimeraX-AxesPlanes: 2.0 ChimeraX-BasicActions: 1.1 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 1.1 ChimeraX-BondRot: 2.0 ChimeraX-BugReporter: 1.0 ChimeraX-BuildStructure: 2.5.2 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.1 ChimeraX-ButtonPanel: 1.0 ChimeraX-CageBuilder: 1.0 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.1 ChimeraX-ChemGroup: 2.0 ChimeraX-Clashes: 2.1 ChimeraX-ColorActions: 1.0 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.2.1 ChimeraX-CommandLine: 1.1.4 ChimeraX-ConnectStructure: 2.0 ChimeraX-Contacts: 1.0 ChimeraX-Core: 1.2.5 ChimeraX-CoreFormats: 1.0 ChimeraX-coulombic: 1.1.1 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0 ChimeraX-DataFormats: 1.1 ChimeraX-Dicom: 1.0 ChimeraX-DistMonitor: 1.1.3 ChimeraX-DistUI: 1.0 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ExperimentalCommands: 1.0 ChimeraX-FileHistory: 1.0 ChimeraX-FunctionKey: 1.0 ChimeraX-Geometry: 1.1 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.0 ChimeraX-Hbonds: 2.1 ChimeraX-Help: 1.1 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.0 ChimeraX-ImageFormats: 1.1 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-Label: 1.0 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.1 ChimeraX-Map: 1.0.2 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0 ChimeraX-MapFilter: 2.0 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.0 ChimeraX-Markers: 1.0 ChimeraX-Mask: 1.0 ChimeraX-MatchMaker: 1.2.1 ChimeraX-MDcrds: 2.2 ChimeraX-MedicalToolbar: 1.0.1 ChimeraX-Meeting: 1.0 ChimeraX-MLP: 1.1 ChimeraX-mmCIF: 2.3 ChimeraX-MMTF: 2.1 ChimeraX-Modeller: 1.0.1 ChimeraX-ModelPanel: 1.0.1 ChimeraX-ModelSeries: 1.0 ChimeraX-Mol2: 2.0 ChimeraX-Morph: 1.0 ChimeraX-MouseModes: 1.1 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nucleotides: 2.0.1 ChimeraX-OpenCommand: 1.5 ChimeraX-PDB: 2.4.1 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.1 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.0.1 ChimeraX-PubChem: 2.0.1 ChimeraX-ReadPbonds: 1.0 ChimeraX-Registration: 1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-ResidueFit: 1.0 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 2.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.4 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0 ChimeraX-SeqView: 2.3 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0 ChimeraX-Shortcuts: 1.0 ChimeraX-ShowAttr: 1.0 ChimeraX-ShowSequences: 1.0 ChimeraX-SideView: 1.0 ChimeraX-Smiles: 2.0.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.3.1 ChimeraX-STL: 1.0 ChimeraX-Storm: 1.0 ChimeraX-Struts: 1.0 ChimeraX-Surface: 1.0 ChimeraX-SwapAA: 2.0 ChimeraX-SwapRes: 2.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.0.1 ChimeraX-ToolshedUtils: 1.2 ChimeraX-Tug: 1.0 ChimeraX-UI: 1.7.6 ChimeraX-uniprot: 2.1 ChimeraX-UnitCell: 1.0 ChimeraX-ViewDockX: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0 ChimeraX-WebServices: 1.0 ChimeraX-Zone: 1.0 colorama: 0.4.3 comtypes: 1.1.7 cxservices: 1.0 cycler: 0.10.0 Cython: 0.29.21 decorator: 5.0.9 distlib: 0.3.1 docutils: 0.16 filelock: 3.0.12 funcparserlib: 0.3.6 grako: 3.16.5 h5py: 2.10.0 html2text: 2020.1.16 idna: 2.10 ihm: 0.17 imagecodecs: 2020.5.30 imagesize: 1.2.0 ipykernel: 5.3.4 ipython: 7.18.1 ipython-genutils: 0.2.0 jedi: 0.17.2 Jinja2: 2.11.2 jupyter-client: 6.1.7 jupyter-core: 4.7.1 kiwisolver: 1.3.1 line-profiler: 2.1.2 lxml: 4.6.2 lz4: 3.1.0 MarkupSafe: 2.0.1 matplotlib: 3.3.2 matplotlib-inline: 0.1.2 msgpack: 1.0.0 netCDF4: 1.5.4 networkx: 2.5 numexpr: 2.7.3 numpy: 1.19.2 numpydoc: 1.1.0 openvr: 1.14.1501 packaging: 20.9 ParmEd: 3.2.0 parso: 0.7.1 pexpect: 4.8.0 pickleshare: 0.7.5 Pillow: 7.2.0 pip: 21.0.1 pkginfo: 1.5.0.1 prompt-toolkit: 3.0.18 psutil: 5.7.2 ptyprocess: 0.7.0 pycollada: 0.7.1 pydicom: 2.0.0 Pygments: 2.7.1 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 2.4.7 PyQt5-commercial: 5.15.2 PyQt5-sip: 12.8.1 PyQtWebEngine-commercial: 5.15.2 python-dateutil: 2.8.1 pytz: 2021.1 pyzmq: 22.0.3 qtconsole: 4.7.7 QtPy: 1.9.0 RandomWords: 0.3.0 requests: 2.24.0 scipy: 1.5.2 setuptools: 50.3.2 sfftk-rw: 0.6.7.dev1 six: 1.15.0 snowballstemmer: 2.1.0 sortedcontainers: 2.2.2 Sphinx: 3.2.1 sphinxcontrib-applehelp: 1.0.2 sphinxcontrib-blockdiag: 2.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 suds-jurko: 0.6 tables: 3.6.1 tifffile: 2020.9.3 tinyarray: 1.2.3 tornado: 6.1 traitlets: 5.0.5 urllib3: 1.25.11 wcwidth: 0.2.5 webcolors: 1.11.1 wheel: 0.36.0 wheel-filename: 1.3.0 }}} " defect feedback normal UI Tom Goddard all ChimeraX