id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 5065 Crash in garbage collection during new-object allocation rslack@… Eric Pettersen "{{{ The following bug report has been submitted: Platform: Darwin-19.6.0-x86_64-i386-64bit ChimeraX Version: 1.0 (2020-06-04 23:15:07 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Process: ChimeraX [15987] Path: /Applications/ChimeraX-1.0.app/Contents/MacOS/ChimeraX Identifier: edu.ucsf.cgl.ChimeraX Version: 1.0.0 (1.0.0.0) Code Type: X86-64 (Native) Parent Process: ??? [1] Responsible: ChimeraX [15987] User ID: 503 Date/Time: 2021-08-16 16:03:13.783 -0400 OS Version: Mac OS X 10.15.7 (19H2) Report Version: 12 Bridge OS Version: 4.6 (17P6610) Anonymous UUID: B03EA75F-E4D6-7B22-94DA-8FD95C1FFF44 Sleep/Wake UUID: 1FD92C98-53F2-4090-A857-9D4753C0FCA3 Time Awake Since Boot: 2100000 seconds Time Since Wake: 12000 seconds System Integrity Protection: enabled Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread Exception Type: EXC_BAD_ACCESS (SIGSEGV) Exception Codes: KERN_INVALID_ADDRESS at 0x00000000000000a9 Exception Note: EXC_CORPSE_NOTIFY VM Regions Near 0xa9: --> __TEXT 000000010de24000-000000010de25000 [ 4K] r-x/r-x SM=COW /Applications/ChimeraX-1.0.app/Contents/MacOS/ChimeraX Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread 0 libsystem_kernel.dylib 0x00007fff684c433a __pthread_kill + 10 1 libsystem_pthread.dylib 0x00007fff68580e60 pthread_kill + 430 2 libsystem_c.dylib 0x00007fff683db93e raise + 26 3 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0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001205113a1 0x11e366000 + 35304353 4 QtWebEngineCore 0x0000000120528ca8 0x11e366000 + 35400872 5 QtWebEngineCore 0x00000001205295db 0x11e366000 + 35403227 6 QtWebEngineCore 0x00000001205291b4 0x11e366000 + 35402164 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 9:: Chrome_IOThread 0 libsystem_kernel.dylib 0x00007fff684c2766 kevent + 10 1 QtWebEngineCore 0x00000001207d2929 0x11e366000 + 38193449 2 QtWebEngineCore 0x00000001207cfc3d 0x11e366000 + 38181949 3 QtWebEngineCore 0x0000000120586c44 0x11e366000 + 35785796 4 QtWebEngineCore 0x00000001204ee005 0x11e366000 + 35160069 5 QtWebEngineCore 0x000000011fe53fa4 0x11e366000 + 28237732 6 QtWebEngineCore 0x000000012054093c 0x11e366000 + 35498300 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 10:: TaskSchedulerSingleThreadSharedBackgroundBlocking0 0 libsystem_kernel.dylib 0x00007fff684bddfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001205111af 0x11e366000 + 35303855 4 QtWebEngineCore 0x0000000120528c9a 0x11e366000 + 35400858 5 QtWebEngineCore 0x000000012052933f 0x11e366000 + 35402559 6 QtWebEngineCore 0x00000001205291e4 0x11e366000 + 35402212 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 11:: CompositorTileWorker1/66563 0 libsystem_kernel.dylib 0x00007fff684c0882 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff68581425 _pthread_cond_wait + 698 2 QtWebEngineCore 0x000000012057ef28 0x11e366000 + 35753768 3 QtWebEngineCore 0x0000000121507628 0x11e366000 + 52041256 4 QtWebEngineCore 0x000000012053f614 0x11e366000 + 35493396 5 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 6 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 7 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 12:: AudioThread 0 libsystem_kernel.dylib 0x00007fff684bddfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001205111af 0x11e366000 + 35303855 4 QtWebEngineCore 0x00000001204c4fdd 0x11e366000 + 34992093 5 QtWebEngineCore 0x00000001204ee005 0x11e366000 + 35160069 6 QtWebEngineCore 0x000000012054093c 0x11e366000 + 35498300 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 13:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff684bddfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001205111af 0x11e366000 + 35303855 4 QtWebEngineCore 0x00000001204c4fdd 0x11e366000 + 34992093 5 QtWebEngineCore 0x00000001204ee005 0x11e366000 + 35160069 6 QtWebEngineCore 0x000000012054093c 0x11e366000 + 35498300 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 14:: Chrome_InProcGpuThread 0 libsystem_kernel.dylib 0x00007fff684bddfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001204c4fd2 0x11e366000 + 34992082 4 QtWebEngineCore 0x00000001204ee005 0x11e366000 + 35160069 5 QtWebEngineCore 0x000000012054093c 0x11e366000 + 35498300 6 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 7 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 15:: Chrome_ChildIOThread 0 libsystem_kernel.dylib 0x00007fff684c2766 kevent + 10 1 QtWebEngineCore 0x00000001207d2929 0x11e366000 + 38193449 2 QtWebEngineCore 0x00000001207cfc3d 0x11e366000 + 38181949 3 QtWebEngineCore 0x0000000120586c5c 0x11e366000 + 35785820 4 QtWebEngineCore 0x00000001204ee005 0x11e366000 + 35160069 5 QtWebEngineCore 0x000000012054093c 0x11e366000 + 35498300 6 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 7 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 16:: TaskSchedulerSingleThreadForegroundBlocking1 0 libsystem_kernel.dylib 0x00007fff684bddfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001205111af 0x11e366000 + 35303855 4 QtWebEngineCore 0x0000000120528c9a 0x11e366000 + 35400858 5 QtWebEngineCore 0x00000001205295db 0x11e366000 + 35403227 6 QtWebEngineCore 0x00000001205292a4 0x11e366000 + 35402404 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 17:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff684bddfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001205111af 0x11e366000 + 35303855 4 QtWebEngineCore 0x00000001204c4fdd 0x11e366000 + 34992093 5 QtWebEngineCore 0x00000001204ee005 0x11e366000 + 35160069 6 QtWebEngineCore 0x000000012054093c 0x11e366000 + 35498300 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 18:: QFileInfoGatherer 0 libsystem_kernel.dylib 0x00007fff684c0882 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff68581425 _pthread_cond_wait + 698 2 QtCore 0x000000011b8baa4b 0x11b890000 + 174667 3 QtCore 0x000000011b8ba9ac QWaitCondition::wait(QMutex*, QDeadlineTimer) + 108 4 QtWidgets 0x000000011afb9762 0x11ad7e000 + 2340706 5 QtCore 0x000000011b8b2253 0x11b890000 + 139859 6 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 7 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 19:: TaskSchedulerForegroundBlockingWorker 0 libsystem_kernel.dylib 0x00007fff684bddfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001205113a1 0x11e366000 + 35304353 4 QtWebEngineCore 0x0000000120528ca8 0x11e366000 + 35400872 5 QtWebEngineCore 0x00000001205295db 0x11e366000 + 35403227 6 QtWebEngineCore 0x0000000120529244 0x11e366000 + 35402308 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 20:: TaskSchedulerForegroundWorker 0 libsystem_kernel.dylib 0x00007fff684bddfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001205113a1 0x11e366000 + 35304353 4 QtWebEngineCore 0x0000000120528ca8 0x11e366000 + 35400872 5 QtWebEngineCore 0x00000001205295db 0x11e366000 + 35403227 6 QtWebEngineCore 0x0000000120529244 0x11e366000 + 35402308 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 21:: TaskSchedulerBackgroundBlockingWorker 0 libsystem_kernel.dylib 0x00007fff684bddfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001205113a1 0x11e366000 + 35304353 4 QtWebEngineCore 0x0000000120528ca8 0x11e366000 + 35400872 5 QtWebEngineCore 0x00000001205295db 0x11e366000 + 35403227 6 QtWebEngineCore 0x00000001205291b4 0x11e366000 + 35402164 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 22:: TaskSchedulerForegroundWorker 0 libsystem_kernel.dylib 0x00007fff684bddfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff684be170 mach_msg + 60 2 QtWebEngineCore 0x00000001205112ad 0x11e366000 + 35304109 3 QtWebEngineCore 0x00000001205113a1 0x11e366000 + 35304353 4 QtWebEngineCore 0x0000000120528ca8 0x11e366000 + 35400872 5 QtWebEngineCore 0x000000012052933f 0x11e366000 + 35402559 6 QtWebEngineCore 0x0000000120529244 0x11e366000 + 35402308 7 QtWebEngineCore 0x0000000120580697 0x11e366000 + 35759767 8 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 23: 0 libsystem_pthread.dylib 0x00007fff6857cb68 start_wqthread + 0 Thread 24: 0 libsystem_pthread.dylib 0x00007fff6857cb68 start_wqthread + 0 Thread 25: 0 libsystem_kernel.dylib 0x00007fff684c0882 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff68581425 _pthread_cond_wait + 698 2 org.python.python 0x000000010df6c04f PyThread_acquire_lock_timed + 351 3 org.python.python 0x000000010dfb795f acquire_timed + 111 4 org.python.python 0x000000010dfb76dc lock_PyThread_acquire_lock + 44 5 org.python.python 0x000000010de53582 _PyMethodDef_RawFastCallKeywords + 722 6 org.python.python 0x000000010de59581 _PyMethodDescr_FastCallKeywords + 81 7 org.python.python 0x000000010df27b8e call_function + 814 8 org.python.python 0x000000010df2478a _PyEval_EvalFrameDefault + 26538 9 org.python.python 0x000000010df289bc _PyEval_EvalCodeWithName + 3276 10 org.python.python 0x000000010de52879 _PyFunction_FastCallKeywords + 217 11 org.python.python 0x000000010df27b64 call_function + 772 12 org.python.python 0x000000010df2478a _PyEval_EvalFrameDefault + 26538 13 org.python.python 0x000000010df289bc _PyEval_EvalCodeWithName + 3276 14 org.python.python 0x000000010de52879 _PyFunction_FastCallKeywords + 217 15 org.python.python 0x000000010df27b64 call_function + 772 16 org.python.python 0x000000010df2478a _PyEval_EvalFrameDefault + 26538 17 org.python.python 0x000000010de52d61 function_code_fastcall + 177 18 org.python.python 0x000000010df27b64 call_function + 772 19 org.python.python 0x000000010df2478a _PyEval_EvalFrameDefault + 26538 20 org.python.python 0x000000010de52d61 function_code_fastcall + 177 21 org.python.python 0x000000010df27b64 call_function + 772 22 org.python.python 0x000000010df2478a _PyEval_EvalFrameDefault + 26538 23 org.python.python 0x000000010de52d61 function_code_fastcall + 177 24 org.python.python 0x000000010de53883 _PyObject_Call_Prepend + 131 25 org.python.python 0x000000010de529d8 PyObject_Call + 136 26 org.python.python 0x000000010dfb8207 t_bootstrap + 71 27 org.python.python 0x000000010df6bcb9 pythread_wrapper + 25 28 libsystem_pthread.dylib 0x00007fff68581109 _pthread_start + 148 29 libsystem_pthread.dylib 0x00007fff6857cb8b thread_start + 15 Thread 0 crashed with X86 Thread State (64-bit): rax: 0x0000000000000000 rbx: 0x000000011bf8fdc0 rcx: 0x00007fe514777a58 rdx: 0x0000000000000000 rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00007fe514777a80 rsp: 0x00007fe514777a58 r8: 0x00007fe514777f48 r9: 0x64b934fa90edc675 r10: 0x000000011bf8fdc0 r11: 0x0000000000000246 r12: 0x0000000000000307 r13: 0x0000000131a24eb0 r14: 0x000000000000000b r15: 0x0000000000000016 rip: 0x00007fff684c433a rfl: 0x0000000000000246 cr2: 0x00007fe515011628 Logical CPU: 0 Error Code: 0x02000148 Trap Number: 133 Binary Images: 0x10de24000 - 0x10de24ff3 +edu.ucsf.cgl.ChimeraX (1.0.0 - 1.0.0.0) /Applications/ChimeraX-1.0.app/Contents/MacOS/ChimeraX 0x10de2f000 - 0x10e02afff +org.python.python (3.7.7, [c] 2001-2019 Python Software Foundation. - 3.7.7) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/Python 0x10e3a2000 - 0x10e3a3ff7 +_heapq.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_heapq.cpython-37m-darwin.so 0x10e46c000 - 0x10e46fff3 +zlib.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/zlib.cpython-37m-darwin.so 0x10e479000 - 0x10e48dff7 +libz.1.2.11.dylib (0) /Applications/ChimeraX-1.0.app/Contents/lib/libz.1.2.11.dylib 0x10e4d7000 - 0x10e4d8ff7 +_bz2.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_bz2.cpython-37m-darwin.so 0x10e4e1000 - 0x10e4e4fff +_lzma.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_lzma.cpython-37m-darwin.so 0x10e4ef000 - 0x10e4efffb +grp.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/grp.cpython-37m-darwin.so 0x10e537000 - 0x10e53cffb +math.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/math.cpython-37m-darwin.so 0x10e548000 - 0x10e54aff3 +_hashlib.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_hashlib.cpython-37m-darwin.so 0x10e553000 - 0x10e5b0ff7 +libssl.1.1.dylib (0) /Applications/ChimeraX-1.0.app/Contents/lib/libssl.1.1.dylib 0x10e5df000 - 0x10e7a6af3 +libcrypto.1.1.dylib (0) /Applications/ChimeraX-1.0.app/Contents/lib/libcrypto.1.1.dylib 0x10e83f000 - 0x10e844ff3 +_blake2.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_blake2.cpython-37m-darwin.so 0x10e84e000 - 0x10e85eff3 +_sha3.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_sha3.cpython-37m-darwin.so 0x10e869000 - 0x10e869ffb +_bisect.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_bisect.cpython-37m-darwin.so 0x10e871000 - 0x10e872ffb +_random.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_random.cpython-37m-darwin.so 0x10e93a000 - 0x10e940ffb +_json.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_json.cpython-37m-darwin.so 0x10e989000 - 0x10e996ff3 +_ssl.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_ssl.cpython-37m-darwin.so 0x10e9ac000 - 0x10e9b5ffb +_socket.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_socket.cpython-37m-darwin.so 0x10ea07000 - 0x10ea0afff +select.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/select.cpython-37m-darwin.so 0x10ea14000 - 0x10ea18ff3 +_struct.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_struct.cpython-37m-darwin.so 0x10ea26000 - 0x10ea2aff7 +binascii.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/binascii.cpython-37m-darwin.so 0x10eb33000 - 0x10eb41ff3 +_datetime.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_datetime.cpython-37m-darwin.so 0x10eb91000 - 0x10eb91ff3 +_scproxy.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.0.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_scproxy.cpython-37m-darwin.so 0x10eb99000 - 0x10ebd7fff +_decimal.cpython-37m-darwin.so (0) 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libutil.dylib (57) /usr/lib/libutil.dylib 0x7fff6777b000 - 0x7fff67788ff7 libxar.1.dylib (425.2) /usr/lib/libxar.1.dylib 0x7fff6778e000 - 0x7fff67870fff libxml2.2.dylib (33.5) /usr/lib/libxml2.2.dylib 0x7fff67874000 - 0x7fff6789cfff libxslt.1.dylib (16.9) /usr/lib/libxslt.1.dylib 0x7fff6789d000 - 0x7fff678afff3 libz.1.dylib (76) /usr/lib/libz.1.dylib 0x7fff6815e000 - 0x7fff68163ff3 libcache.dylib (83) /usr/lib/system/libcache.dylib 0x7fff68164000 - 0x7fff6816ffff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib 0x7fff68170000 - 0x7fff68177fff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib 0x7fff68178000 - 0x7fff68181ff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib 0x7fff68182000 - 0x7fff68214fdb libcorecrypto.dylib (866.140.1) /usr/lib/system/libcorecrypto.dylib 0x7fff68321000 - 0x7fff68361ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib 0x7fff68362000 - 0x7fff68398fff libdyld.dylib (750.6) /usr/lib/system/libdyld.dylib 0x7fff68399000 - 0x7fff68399ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib 0x7fff6839a000 - 0x7fff683a6ff3 libkxld.dylib (6153.141.2) /usr/lib/system/libkxld.dylib 0x7fff683a7000 - 0x7fff683a7ff7 liblaunch.dylib (1738.140.1) /usr/lib/system/liblaunch.dylib 0x7fff683a8000 - 0x7fff683adff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib 0x7fff683ae000 - 0x7fff683b0ff3 libquarantine.dylib (110.40.3) /usr/lib/system/libquarantine.dylib 0x7fff683b1000 - 0x7fff683b2ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib 0x7fff683b3000 - 0x7fff683caff3 libsystem_asl.dylib (377.60.2) /usr/lib/system/libsystem_asl.dylib 0x7fff683cb000 - 0x7fff683cbff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib 0x7fff683cc000 - 0x7fff68453fff libsystem_c.dylib (1353.100.2) /usr/lib/system/libsystem_c.dylib 0x7fff68454000 - 0x7fff68457ffb libsystem_configuration.dylib (1061.141.1) /usr/lib/system/libsystem_configuration.dylib 0x7fff68458000 - 0x7fff6845bfff libsystem_coreservices.dylib (114) /usr/lib/system/libsystem_coreservices.dylib 0x7fff6845c000 - 0x7fff68464fff libsystem_darwin.dylib (1353.100.2) /usr/lib/system/libsystem_darwin.dylib 0x7fff68465000 - 0x7fff6846cfff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib 0x7fff6846d000 - 0x7fff6846effb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib 0x7fff6846f000 - 0x7fff684bcff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib 0x7fff684bd000 - 0x7fff684e9ff7 libsystem_kernel.dylib (6153.141.2) /usr/lib/system/libsystem_kernel.dylib 0x7fff684ea000 - 0x7fff68531fff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib 0x7fff68532000 - 0x7fff68559fff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib 0x7fff6855a000 - 0x7fff68567ffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib 0x7fff68568000 - 0x7fff68571ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib 0x7fff68572000 - 0x7fff6857afef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib 0x7fff6857b000 - 0x7fff68585fff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib 0x7fff68586000 - 0x7fff6858aff3 libsystem_sandbox.dylib (1217.141.2) /usr/lib/system/libsystem_sandbox.dylib 0x7fff6858b000 - 0x7fff6858dfff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib 0x7fff6858e000 - 0x7fff68595ffb libsystem_symptoms.dylib (1238.120.1) /usr/lib/system/libsystem_symptoms.dylib 0x7fff68596000 - 0x7fff685acff2 libsystem_trace.dylib (1147.120) /usr/lib/system/libsystem_trace.dylib 0x7fff685ae000 - 0x7fff685b3ff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib 0x7fff685b4000 - 0x7fff685e9ffe libxpc.dylib (1738.140.1) /usr/lib/system/libxpc.dylib External Modification Summary: Calls made by other processes targeting this process: task_for_pid: 174 thread_create: 0 thread_set_state: 0 Calls made by this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by all processes on this machine: task_for_pid: 280477361 thread_create: 0 thread_set_state: 0 VM Region Summary: ReadOnly portion of Libraries: Total=940.7M resident=0K(0%) swapped_out_or_unallocated=940.7M(100%) Writable regions: Total=1.0G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.0G(100%) VIRTUAL REGION REGION TYPE SIZE COUNT (non-coalesced) =========== ======= ======= Accelerate framework 640K 5 Activity Tracing 256K 1 CG backing stores 1328K 4 CG image 320K 31 CoreAnimation 460K 40 CoreGraphics 8K 1 CoreImage 44K 7 CoreUI image data 3220K 37 Foundation 4K 1 Kernel Alloc Once 8K 1 MALLOC 562.3M 421 MALLOC guard page 32K 7 MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated) MALLOC_NANO (reserved) 128.0M 1 reserved VM address space (unallocated) OpenGL GLSL 512K 6 PROTECTED_MEMORY 4K 1 STACK GUARD 100K 25 Stack 152.7M 26 Stack Guard 56.0M 1 VM_ALLOCATE 158.2M 387 VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated) __DATA 51.5M 547 __DATA_CONST 44K 4 __FONT_DATA 4K 1 __GLSLBUILTINS 5176K 1 __LINKEDIT 413.3M 141 __OBJC_RO 32.3M 1 __OBJC_RW 1908K 2 __TEXT 527.4M 512 __UNICODE 564K 1 mapped file 98.5M 92 shared memory 664K 21 =========== ======= ======= TOTAL 2.2G 2328 TOTAL, minus reserved VM space 2.0G 2328 Log: UCSF ChimeraX version: 1.0 (2020-06-04) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 INTEL-14.7.8 OpenGL renderer: Intel(R) Iris(TM) Plus Graphics 655 OpenGL vendor: Intel Inc.Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro15,2 Processor Name: Quad-Core Intel Core i5 Processor Speed: 2.3 GHz Number of Processors: 1 Total Number of Cores: 4 L2 Cache (per Core): 256 KB L3 Cache: 6 MB Hyper-Threading Technology: Enabled Memory: 16 GB Boot ROM Version: 1037.147.4.0.0 (iBridge: 17.16.16610.0.0,0) Software: System Software Overview: System Version: macOS 10.15.7 (19H2) Kernel Version: Darwin 19.6.0 Time since boot: 25 days 16:11 Graphics/Displays: Intel Iris Plus Graphics 655: Chipset Model: Intel Iris Plus Graphics 655 Type: GPU Bus: Built-In VRAM (Dynamic, Max): 1536 MB Vendor: Intel Device ID: 0x3ea5 Revision ID: 0x0001 Metal: Supported, feature set macOS GPUFamily2 v1 Displays: Color LCD: Display Type: Built-In Retina LCD Resolution: 2560 x 1600 Retina Framebuffer Depth: 30-Bit Color (ARGB2101010) Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: No Connection Type: Internal C32F391: Resolution: 1920 x 1080 (1080p FHD - Full High Definition) UI Looks like: 1920 x 1080 @ 60 Hz Framebuffer Depth: 30-Bit Color (ARGB2101010) Display Serial Number: HTQHC00034 Mirror: Off Online: Yes Rotation: Supported Adapter Type: DVI or HDMI Automatically Adjust Brightness: No Adapter Firmware Version: ff.c1 PyQt version: 5.12.3 Compiled Qt version: 5.12.4 Runtime Qt version: 5.12.8 }}} " defect closed normal Core can't reproduce all ChimeraX