id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 4784 Graphics crash, maOS 11.3, Intel Iris Plus 640 marharytakrylova1@… Tom Goddard "{{{ The following bug report has been submitted: Platform: macOS-10.16-x86_64-i386-64bit ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Fatal Python error: Aborted Current thread 0x0000000111b8be00 (most recent call first): File ""/private/var/folders/ft/l_43l6js52z44fj635q_vp4m0000gn/T/AppTranslocation/CC9E0230-25E6-4F69-84EB-36CF04FB499A/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/graphics/opengl.py"", line 226 in swap_buffers File ""/private/var/folders/ft/l_43l6js52z44fj635q_vp4m0000gn/T/AppTranslocation/CC9E0230-25E6-4F69-84EB-36CF04FB499A/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/graphics/opengl.py"", line 484 in swap_buffers File ""/private/var/folders/ft/l_43l6js52z44fj635q_vp4m0000gn/T/AppTranslocation/CC9E0230-25E6-4F69-84EB-36CF04FB499A/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/graphics/view.py"", line 179 in draw File ""/private/var/folders/ft/l_43l6js52z44fj635q_vp4m0000gn/T/AppTranslocation/CC9E0230-25E6-4F69-84EB-36CF04FB499A/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/core/updateloop.py"", line 73 in draw_new_frame File ""/private/var/folders/ft/l_43l6js52z44fj635q_vp4m0000gn/T/AppTranslocation/CC9E0230-25E6-4F69-84EB-36CF04FB499A/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/core/updateloop.py"", line 138 in _redraw_timer_callback File ""/private/var/folders/ft/l_43l6js52z44fj635q_vp4m0000gn/T/AppTranslocation/CC9E0230-25E6-4F69-84EB-36CF04FB499A/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/chimerax/ui/gui.py"", line 293 in event_loop File ""/private/var/folders/ft/l_43l6js52z44fj635q_vp4m0000gn/T/AppTranslocation/CC9E0230-25E6-4F69-84EB-36CF04FB499A/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/ChimeraX_main.py"", line 866 in init File ""/private/var/folders/ft/l_43l6js52z44fj635q_vp4m0000gn/T/AppTranslocation/CC9E0230-25E6-4F69-84EB-36CF04FB499A/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/site-packages/ChimeraX_main.py"", line 1015 in File ""/private/var/folders/ft/l_43l6js52z44fj635q_vp4m0000gn/T/AppTranslocation/CC9E0230-25E6-4F69-84EB-36CF04FB499A/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/runpy.py"", line 87 in _run_code File ""/private/var/folders/ft/l_43l6js52z44fj635q_vp4m0000gn/T/AppTranslocation/CC9E0230-25E6-4F69-84EB-36CF04FB499A/d/ChimeraX-1.2.5.app/Contents/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/runpy.py"", line 194 in _run_module_as_main Process: ChimeraX [65345] Path: /Volumes/VOLUME/*/ChimeraX-1.2.5.app/Contents/MacOS/ChimeraX Identifier: edu.ucsf.cgl.ChimeraX Version: 1.2.5 (1.2.5.0) Code Type: X86-64 (Native) Parent Process: ??? [1] Responsible: ChimeraX [65345] User ID: 501 Date/Time: 2021-06-17 12:32:05.051 -0400 OS Version: macOS 11.3 (20E232) Report Version: 12 Anonymous UUID: 960AA86D-7B45-6759-FAE1-80351636A92C Sleep/Wake UUID: 26A4318C-281F-4DCF-A300-CC7093C7DF29 Time Awake Since Boot: 700000 seconds Time Since Wake: 16000 seconds System Integrity Protection: enabled Notes: Translocated Process Crashed Thread: 0 CrBrowserMain Exception Type: EXC_CRASH (SIGABRT) Exception Codes: 0x0000000000000000, 0x0000000000000000 Exception Note: EXC_CORPSE_NOTIFY Application Specific Signatures: Graphics hardware encountered an error and was reset: 0x00000813 Thread 0 Crashed:: CrBrowserMain 0 libsystem_kernel.dylib 0x00007fff20331946 0x7fff2032a000 + 31046 1 libsystem_c.dylib 0x00007fff20244be5 0x7fff20235000 + 64485 2 libsystem_platform.dylib 0x00007fff203a5d7d 0x7fff203a2000 + 15741 3 ??? 000000000000000000 0 + 0 4 libsystem_c.dylib 0x00007fff202b5411 0x7fff20235000 + 525329 5 libGPUSupportMercury.dylib 0x00007fff461be0a6 gpusGenerateCrashLog.cold.1 + 95 6 libGPUSupportMercury.dylib 0x00007fff461b5238 gpusGenerateCrashLog + 89 7 com.apple.driver.AppleIntelKBLGraphicsGLDriver 0x00007fff5fa61c89 gpusKillClientExt + 9 8 libGPUSupportMercury.dylib 0x00007fff461b6749 gpusSubmitDataBuffers + 490 9 com.apple.driver.AppleIntelKBLGraphicsGLDriver 0x00007fff5ecf2d3a IntelCommandBuffer::getNew(GLDContextRec*) + 48 10 com.apple.driver.AppleIntelKBLGraphicsGLDriver 0x00007fff5ecf2b4e intelSubmitCommands + 171 11 com.apple.driver.AppleIntelKBLGraphicsGLDriver 0x00007fff5ee18978 gldPresentFramebufferData + 120 12 GLEngine 0x00007fff6bb0daf1 glSwap_Exec + 97 13 com.apple.opengl 0x00007fff6b8d32eb 0x7fff6b8c6000 + 53995 14 com.apple.AppKit 0x00007fff22fca7c0 0x7fff22c15000 + 3889088 15 libqcocoa.dylib 0x0000000127a1df5d QCocoaGLContext::swapBuffers(QPlatformSurface*) + 541 16 QtGui 0x0000000119d8713c 0x119d01000 + 549180 17 QtGui.abi3.so 0x000000011a48300f 0x11a39d000 + 942095 18 org.python.python 0x000000010d5fb0c2 0x10d5da000 + 135362 19 org.python.python 0x000000010d5faa85 0x10d5da000 + 133765 20 org.python.python 0x000000010d6c9665 0x10d5da000 + 980581 21 org.python.python 0x000000010d6c646e 0x10d5da000 + 967790 22 org.python.python 0x000000010d6ca454 0x10d5da000 + 984148 23 org.python.python 0x000000010d5fb56e 0x10d5da000 + 136558 24 org.python.python 0x000000010d6c960c 0x10d5da000 + 980492 25 org.python.python 0x000000010d6c644a 0x10d5da000 + 967754 26 org.python.python 0x000000010d5fb3d0 0x10d5da000 + 136144 27 org.python.python 0x000000010d6c960c 0x10d5da000 + 980492 28 org.python.python 0x000000010d6c644a 0x10d5da000 + 967754 29 org.python.python 0x000000010d6ca454 0x10d5da000 + 984148 30 org.python.python 0x000000010d5fb56e 0x10d5da000 + 136558 31 org.python.python 0x000000010d5fda9a 0x10d5da000 + 146074 32 org.python.python 0x000000010d6c960c 0x10d5da000 + 980492 33 org.python.python 0x000000010d6c6598 0x10d5da000 + 968088 34 org.python.python 0x000000010d5fb3d0 0x10d5da000 + 136144 35 org.python.python 0x000000010d6c960c 0x10d5da000 + 980492 36 org.python.python 0x000000010d6c644a 0x10d5da000 + 967754 37 org.python.python 0x000000010d5fb3d0 0x10d5da000 + 136144 38 org.python.python 0x000000010d5fdadb 0x10d5da000 + 146139 39 org.python.python 0x000000010d5fadad 0x10d5da000 + 134573 40 QtCore.abi3.so 0x0000000110b94957 0x110a5f000 + 1268055 41 QtCore.abi3.so 0x0000000110b94866 0x110a5f000 + 1267814 42 QtCore.abi3.so 0x0000000110b95455 0x110a5f000 + 1270869 43 QtCore.abi3.so 0x0000000110b953ca 0x110a5f000 + 1270730 44 QtCore 0x0000000110f78f6e 0x110d4d000 + 2277230 45 QtCore 0x0000000110f824c2 0x110d4d000 + 2315458 46 QtCore.abi3.so 0x0000000110a7dbf9 0x110a5f000 + 125945 47 QtCore 0x0000000110f7085f 0x110d4d000 + 2242655 48 QtCore.abi3.so 0x0000000110a7da7a 0x110a5f000 + 125562 49 QtWidgets 0x00000001196ce9ea 0x1196be000 + 68074 50 QtWidgets 0x00000001196cfe11 0x1196be000 + 73233 51 QtWidgets.abi3.so 0x00000001115d8db9 0x11148e000 + 1355193 52 QtCore 0x0000000110f45a34 0x110d4d000 + 2066996 53 QtCore 0x0000000110fab35f 0x110d4d000 + 2483039 54 libqcocoa.dylib 0x00000001279fc8f2 QCocoaEventDispatcherPrivate::activateTimersSourceCallback(void*) + 18 55 com.apple.CoreFoundation 0x00007fff20459a8c 0x7fff203d8000 + 531084 56 com.apple.CoreFoundation 0x00007fff204599f4 0x7fff203d8000 + 530932 57 com.apple.CoreFoundation 0x00007fff20459774 0x7fff203d8000 + 530292 58 com.apple.CoreFoundation 0x00007fff2045819c 0x7fff203d8000 + 524700 59 com.apple.CoreFoundation 0x00007fff2045775c 0x7fff203d8000 + 522076 60 com.apple.HIToolbox 0x00007fff28679203 0x7fff28648000 + 201219 61 com.apple.HIToolbox 0x00007fff28678e36 0x7fff28648000 + 200246 62 com.apple.HIToolbox 0x00007fff28678d03 0x7fff28648000 + 199939 63 com.apple.AppKit 0x00007fff22c53b32 0x7fff22c15000 + 256818 64 com.apple.AppKit 0x00007fff22c52305 0x7fff22c15000 + 250629 65 com.apple.AppKit 0x00007fff22c44679 0x7fff22c15000 + 194169 66 libqcocoa.dylib 0x00000001279fd62f QCocoaEventDispatcher::processEvents(QFlags) + 2495 67 QtCore 0x0000000110f41acf 0x110d4d000 + 2050767 68 QtCore 0x0000000110f46042 0x110d4d000 + 2068546 69 QtWidgets.abi3.so 0x00000001116ca702 0x11148e000 + 2344706 70 org.python.python 0x000000010d5fb0c2 0x10d5da000 + 135362 71 org.python.python 0x000000010d5faa85 0x10d5da000 + 133765 72 org.python.python 0x000000010d6c9665 0x10d5da000 + 980581 73 org.python.python 0x000000010d6c646e 0x10d5da000 + 967790 74 org.python.python 0x000000010d5fb3d0 0x10d5da000 + 136144 75 org.python.python 0x000000010d5fda9a 0x10d5da000 + 146074 76 org.python.python 0x000000010d6c960c 0x10d5da000 + 980492 77 org.python.python 0x000000010d6c646e 0x10d5da000 + 967790 78 org.python.python 0x000000010d6ca454 0x10d5da000 + 984148 79 org.python.python 0x000000010d5fb56e 0x10d5da000 + 136558 80 org.python.python 0x000000010d6c960c 0x10d5da000 + 980492 81 org.python.python 0x000000010d6c6505 0x10d5da000 + 967941 82 org.python.python 0x000000010d6ca454 0x10d5da000 + 984148 83 org.python.python 0x000000010d6bff44 0x10d5da000 + 941892 84 org.python.python 0x000000010d6bd332 0x10d5da000 + 930610 85 org.python.python 0x000000010d6375ff 0x10d5da000 + 382463 86 org.python.python 0x000000010d6c960c 0x10d5da000 + 980492 87 org.python.python 0x000000010d6c6505 0x10d5da000 + 967941 88 org.python.python 0x000000010d6ca454 0x10d5da000 + 984148 89 org.python.python 0x000000010d5fb56e 0x10d5da000 + 136558 90 org.python.python 0x000000010d6c960c 0x10d5da000 + 980492 91 org.python.python 0x000000010d6c6505 0x10d5da000 + 967941 92 org.python.python 0x000000010d6ca454 0x10d5da000 + 984148 93 org.python.python 0x000000010d5fb56e 0x10d5da000 + 136558 94 org.python.python 0x000000010d5fadad 0x10d5da000 + 134573 95 org.python.python 0x000000010d72ceb3 0x10d5da000 + 1388211 96 org.python.python 0x000000010d72c585 0x10d5da000 + 1385861 97 org.python.python 0x000000010d72cbdf 0x10d5da000 + 1387487 98 org.python.python 0x000000010d72caeb 0x10d5da000 + 1387243 99 edu.ucsf.cgl.ChimeraX 0x000000010d5cfdc8 0x10d5cf000 + 3528 100 libdyld.dylib 0x00007fff2037bf3d 0x7fff20366000 + 89917 Thread 1: 0 libsystem_kernel.dylib 0x00007fff2032dd4e 0x7fff2032a000 + 15694 1 libopenblas.0.dylib 0x0000000111f0527b 0x111bcc000 + 3379835 2 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 3 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 2:: ThreadPoolServiceThread 0 libsystem_kernel.dylib 0x00007fff203341ea 0x7fff2032a000 + 41450 1 QtWebEngineCore 0x000000011d23acc7 0x11a70e000 + 45272263 2 QtWebEngineCore 0x000000011d1c362b 0x11a70e000 + 44783147 3 QtWebEngineCore 0x000000011d1877cb 0x11a70e000 + 44537803 4 QtWebEngineCore 0x000000011d1cea94 0x11a70e000 + 44829332 5 QtWebEngineCore 0x000000011d1e2a7d 0x11a70e000 + 44911229 6 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 7 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 8 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 3:: ThreadPoolForegroundWorker 0 libsystem_kernel.dylib 0x00007fff2032b32a 0x7fff2032a000 + 4906 1 libsystem_kernel.dylib 0x00007fff2032b69c 0x7fff2032a000 + 5788 2 QtWebEngineCore 0x000000011d230492 0x11a70e000 + 45229202 3 QtWebEngineCore 0x000000011d1d8778 0x11a70e000 + 44869496 4 QtWebEngineCore 0x000000011d1d9150 0x11a70e000 + 44872016 5 QtWebEngineCore 0x000000011d1d8cd4 0x11a70e000 + 44870868 6 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 7 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 8 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 4:: ThreadPoolBackgroundWorker 0 libsystem_kernel.dylib 0x00007fff2032b32a 0x7fff2032a000 + 4906 1 libsystem_kernel.dylib 0x00007fff2032b69c 0x7fff2032a000 + 5788 2 QtWebEngineCore 0x000000011d230492 0x11a70e000 + 45229202 3 QtWebEngineCore 0x000000011d1d8778 0x11a70e000 + 44869496 4 QtWebEngineCore 0x000000011d1d9150 0x11a70e000 + 44872016 5 QtWebEngineCore 0x000000011d1d8c44 0x11a70e000 + 44870724 6 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 7 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 8 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 5:: Chrome_IOThread 0 libsystem_kernel.dylib 0x00007fff203341ea 0x7fff2032a000 + 41450 1 QtWebEngineCore 0x000000011d23acc7 0x11a70e000 + 45272263 2 QtWebEngineCore 0x000000011d1c362b 0x11a70e000 + 44783147 3 QtWebEngineCore 0x000000011d1877cb 0x11a70e000 + 44537803 4 QtWebEngineCore 0x0000000121107f06 0x11a70e000 + 111124230 5 QtWebEngineCore 0x000000011d1e2a7d 0x11a70e000 + 44911229 6 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 7 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 8 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 6:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff2032b32a 0x7fff2032a000 + 4906 1 libsystem_kernel.dylib 0x00007fff2032b69c 0x7fff2032a000 + 5788 2 QtWebEngineCore 0x000000011d230492 0x11a70e000 + 45229202 3 QtWebEngineCore 0x000000011d2302cf 0x11a70e000 + 45228751 4 QtWebEngineCore 0x000000011d1581db 0x11a70e000 + 44343771 5 QtWebEngineCore 0x000000011d1c362b 0x11a70e000 + 44783147 6 QtWebEngineCore 0x000000011d1877cb 0x11a70e000 + 44537803 7 QtWebEngineCore 0x000000011d1e2a7d 0x11a70e000 + 44911229 8 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 9 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 10 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 7:: CompositorTileWorker1 0 libsystem_kernel.dylib 0x00007fff2032dd4e 0x7fff2032a000 + 15694 1 QtWebEngineCore 0x000000011d227e18 0x11a70e000 + 45194776 2 QtWebEngineCore 0x000000011e4df5f8 0x11a70e000 + 64820728 3 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 4 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 5 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 8:: Chrome_InProcGpuThread 0 libsystem_kernel.dylib 0x00007fff2032b32a 0x7fff2032a000 + 4906 1 libsystem_kernel.dylib 0x00007fff2032b69c 0x7fff2032a000 + 5788 2 QtWebEngineCore 0x000000011d230492 0x11a70e000 + 45229202 3 QtWebEngineCore 0x000000011d15820f 0x11a70e000 + 44343823 4 QtWebEngineCore 0x000000011d1c362b 0x11a70e000 + 44783147 5 QtWebEngineCore 0x000000011d1877cb 0x11a70e000 + 44537803 6 QtWebEngineCore 0x000000011d1e2a7d 0x11a70e000 + 44911229 7 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 8 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 9 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 9:: Chrome_ChildIOThread 0 libsystem_kernel.dylib 0x00007fff203341ea 0x7fff2032a000 + 41450 1 QtWebEngineCore 0x000000011d23acc7 0x11a70e000 + 45272263 2 QtWebEngineCore 0x000000011d1c362b 0x11a70e000 + 44783147 3 QtWebEngineCore 0x000000011d1877cb 0x11a70e000 + 44537803 4 QtWebEngineCore 0x000000011d1e2a7d 0x11a70e000 + 44911229 5 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 6 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 7 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 10:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff2032b32a 0x7fff2032a000 + 4906 1 libsystem_kernel.dylib 0x00007fff2032b69c 0x7fff2032a000 + 5788 2 QtWebEngineCore 0x000000011d230492 0x11a70e000 + 45229202 3 QtWebEngineCore 0x000000011d2302cf 0x11a70e000 + 45228751 4 QtWebEngineCore 0x000000011d1581db 0x11a70e000 + 44343771 5 QtWebEngineCore 0x000000011d1c362b 0x11a70e000 + 44783147 6 QtWebEngineCore 0x000000011d1877cb 0x11a70e000 + 44537803 7 QtWebEngineCore 0x000000011d1e2a7d 0x11a70e000 + 44911229 8 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 9 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 10 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 11:: VizCompositorThread 0 libsystem_kernel.dylib 0x00007fff2032b32a 0x7fff2032a000 + 4906 1 libsystem_kernel.dylib 0x00007fff2032b69c 0x7fff2032a000 + 5788 2 QtWebEngineCore 0x000000011d230492 0x11a70e000 + 45229202 3 QtWebEngineCore 0x000000011d15820f 0x11a70e000 + 44343823 4 QtWebEngineCore 0x000000011d1c362b 0x11a70e000 + 44783147 5 QtWebEngineCore 0x000000011d1877cb 0x11a70e000 + 44537803 6 QtWebEngineCore 0x000000011d1e2a7d 0x11a70e000 + 44911229 7 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 8 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 9 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 12:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff2032b32a 0x7fff2032a000 + 4906 1 libsystem_kernel.dylib 0x00007fff2032b69c 0x7fff2032a000 + 5788 2 QtWebEngineCore 0x000000011d230492 0x11a70e000 + 45229202 3 QtWebEngineCore 0x000000011d2302cf 0x11a70e000 + 45228751 4 QtWebEngineCore 0x000000011d1581db 0x11a70e000 + 44343771 5 QtWebEngineCore 0x000000011d1c362b 0x11a70e000 + 44783147 6 QtWebEngineCore 0x000000011d1877cb 0x11a70e000 + 44537803 7 QtWebEngineCore 0x000000011d1e2a7d 0x11a70e000 + 44911229 8 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 9 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 10 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 13:: ThreadPoolSingleThreadForegroundBlocking0 0 libsystem_kernel.dylib 0x00007fff2032b32a 0x7fff2032a000 + 4906 1 libsystem_kernel.dylib 0x00007fff2032b69c 0x7fff2032a000 + 5788 2 QtWebEngineCore 0x000000011d230492 0x11a70e000 + 45229202 3 QtWebEngineCore 0x000000011d2302cf 0x11a70e000 + 45228751 4 QtWebEngineCore 0x000000011d1d876a 0x11a70e000 + 44869482 5 QtWebEngineCore 0x000000011d1d9150 0x11a70e000 + 44872016 6 QtWebEngineCore 0x000000011d1d8d34 0x11a70e000 + 44870964 7 QtWebEngineCore 0x000000011d22be07 0x11a70e000 + 45211143 8 libsystem_pthread.dylib 0x00007fff20360954 0x7fff2035a000 + 26964 9 libsystem_pthread.dylib 0x00007fff2035c4a7 0x7fff2035a000 + 9383 Thread 14:: MemoryInfra 0 libsystem_kernel.dylib 0x00007fff2032b32a 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0x00007fff2045775c 0x7fff203d8000 + 522076 5 com.apple.Foundation 0x00007fff211e1b47 0x7fff21182000 + 392007 6 com.apple.AppKit 0x00007fff22ed6790 0x7fff22c15000 + 2889616 7 com.apple.AppKit 0x00007fff22ed654e 0x7fff22c15000 + 2889038 8 libdispatch.dylib 0x00007fff201b5603 0x7fff201b3000 + 9731 9 libdispatch.dylib 0x00007fff201b67e6 0x7fff201b3000 + 14310 10 libdispatch.dylib 0x00007fff201c5956 0x7fff201b3000 + 76118 11 libdispatch.dylib 0x00007fff201c5f50 0x7fff201b3000 + 77648 12 libsystem_pthread.dylib 0x00007fff2035d47a 0x7fff2035a000 + 13434 13 libsystem_pthread.dylib 0x00007fff2035c493 0x7fff2035a000 + 9363 Thread 19: 0 libsystem_pthread.dylib 0x00007fff2035c484 0x7fff2035a000 + 9348 Thread 20: 0 libsystem_pthread.dylib 0x00007fff2035c484 0x7fff2035a000 + 9348 Thread 21: 0 libsystem_pthread.dylib 0x00007fff2035c484 0x7fff2035a000 + 9348 Thread 22: 0 libsystem_pthread.dylib 0x00007fff2035c484 0x7fff2035a000 + 9348 Thread 0 crashed with X86 Thread State (64-bit): rax: 0x0000000000000000 rbx: 0x0000000111b8be00 rcx: 0x00007fd9c0055a58 rdx: 0x0000000000000000 rdi: 0x0000000000000103 rsi: 0x0000000000000006 rbp: 0x00007fd9c0055a80 rsp: 0x00007fd9c0055a58 r8: 0x00007fd9c0055f48 r9: 0xecc148a677c1a511 r10: 0x0000000111b8be00 r11: 0x0000000000000246 r12: 0x0000000000000103 r13: 0x00007fd9c3c27518 r14: 0x0000000000000006 r15: 0x0000000000000016 rip: 0x00007fff20331946 rfl: 0x0000000000000246 cr2: 0x00007fd9c0055f48 Logical CPU: 0 Error Code: 0x02000148 Trap Number: 133 Thread 0 instruction stream not available. Thread 0 last branch register state not available. 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1711.4.2) /System/Library/Frameworks/ImageCaptureCore.framework/Versions/A/ImageCaptureCore 0x7fff3dfa5000 - 0x7fff3dfcafff com.apple.quartzfilters (1.10.0 - 98) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzFilters.framework/Versions/A/QuartzFilters 0x7fff3e217000 - 0x7fff3e376fff com.apple.MediaPlayer (1.0 - 1.0) /System/Library/Frameworks/MediaPlayer.framework/Versions/A/MediaPlayer 0x7fff3e377000 - 0x7fff3e655fff com.apple.iTunesCloud (1.0 - 1) /System/Library/PrivateFrameworks/iTunesCloud.framework/Versions/A/iTunesCloud 0x7fff3e681000 - 0x7fff3e7adfff com.apple.AnnotationKit (1.0 - 383.6) /System/Library/PrivateFrameworks/AnnotationKit.framework/Versions/A/AnnotationKit 0x7fff3e7ae000 - 0x7fff3ec4efff com.apple.QuartzComposer (5.1 - 383) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzComposer.framework/Versions/A/QuartzComposer 0x7fff3ec4f000 - 0x7fff3ed37fff com.apple.PDFKit (1.0 - 950.32.1) /System/Library/Frameworks/PDFKit.framework/Versions/A/PDFKit 0x7fff40c7e000 - 0x7fff40c81fff com.apple.quartzframework (1.5 - 25) /System/Library/Frameworks/Quartz.framework/Versions/A/Quartz 0x7fff410a6000 - 0x7fff410c4fff libCGInterfaces.dylib (544.4) /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/Libraries/libCGInterfaces.dylib 0x7fff43653000 - 0x7fff438c6fff com.apple.RawCamera.bundle (9.10.0 - 1440) /System/Library/CoreServices/RawCamera.bundle/Contents/MacOS/RawCamera 0x7fff4412f000 - 0x7fff44133fff com.apple.DAAPKit (1.0 - 1) /System/Library/PrivateFrameworks/DAAPKit.framework/Versions/A/DAAPKit 0x7fff45aab000 - 0x7fff45aaefff libpmenergy.dylib (227.100.2) /usr/lib/libpmenergy.dylib 0x7fff461b3000 - 0x7fff461befff libGPUSupportMercury.dylib (18.5.8) /System/Library/PrivateFrameworks/GPUSupport.framework/Versions/A/Libraries/libGPUSupportMercury.dylib 0x7fff477ea000 - 0x7fff47829fff com.apple.osanalytics.OSAnalytics (1.0 - 1) /System/Library/PrivateFrameworks/OSAnalytics.framework/Versions/A/OSAnalytics 0x7fff48076000 - 0x7fff48091fff com.apple.network.statistics.framework (1.2 - 1) /System/Library/PrivateFrameworks/NetworkStatistics.framework/Versions/A/NetworkStatistics 0x7fff51462000 - 0x7fff51501fff com.apple.Symbolication (12.5 - 64544.66.1) /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication 0x7fff516cd000 - 0x7fff516d0fff libpmsample.dylib (227.100.2) /usr/lib/libpmsample.dylib 0x7fff53d76000 - 0x7fff53dacfff com.apple.ReplayKit (1.0 - 1) /System/Library/Frameworks/ReplayKit.framework/Versions/A/ReplayKit 0x7fff553a6000 - 0x7fff553a9fff com.apple.ForceFeedback (1.0.6 - 1.0.6) /System/Library/Frameworks/ForceFeedback.framework/Versions/A/ForceFeedback 0x7fff5dab8000 - 0x7fff5df47fff com.apple.driver.AppleIntelKBLGraphicsMTLDriver (16.2.16 - 16.0.2) /System/Library/Extensions/AppleIntelKBLGraphicsMTLDriver.bundle/Contents/MacOS/AppleIntelKBLGraphicsMTLDriver 0x7fff5ecd8000 - 0x7fff5fcbffff com.apple.driver.AppleIntelKBLGraphicsGLDriver (16.2.16 - 16.0.2) /System/Library/Extensions/AppleIntelKBLGraphicsGLDriver.bundle/Contents/MacOS/AppleIntelKBLGraphicsGLDriver 0x7fff6946f000 - 0x7fff69473fff libmetal_timestamp.dylib (31001.184.2) /System/Library/PrivateFrameworks/GPUCompiler.framework/Versions/31001/Libraries/libmetal_timestamp.dylib 0x7fff6b8ba000 - 0x7fff6b8c0fff libCoreFSCache.dylib (200.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreFSCache.dylib 0x7fff6b8c1000 - 0x7fff6b8c5fff libCoreVMClient.dylib (200.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreVMClient.dylib 0x7fff6b8c6000 - 0x7fff6b8d5fff com.apple.opengl (18.5.8 - 18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL 0x7fff6b8d6000 - 0x7fff6b8d8fff libCVMSPluginSupport.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib 0x7fff6b8d9000 - 0x7fff6b8e1fff libGFXShared.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib 0x7fff6b8e2000 - 0x7fff6b915fff libGLImage.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib 0x7fff6b916000 - 0x7fff6b952fff libGLU.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib 0x7fff6b953000 - 0x7fff6bae6fff libGLProgrammability.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib 0x7fff6bae7000 - 0x7fff6baf1fff libGL.dylib (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib 0x7fff6baf2000 - 0x7fff6bc6ffff GLEngine (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLEngine.bundle/GLEngine 0x7fff6bc70000 - 0x7fff6bc98fff GLRendererFloat (18.5.8) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLRendererFloat.bundle/GLRendererFloat 0x7fff6cf31000 - 0x7fff6cf89fff com.apple.opencl (4.5 - 4.5) /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL 0x7fff6e02f000 - 0x7fff6e036fff com.apple.agl (3.3.4 - AGL-3.3.3) /System/Library/Frameworks/AGL.framework/Versions/A/AGL 0x7fff6e037000 - 0x7fff6e11efff com.apple.audio.AVFAudio (1.0 - 477.84) /System/Library/Frameworks/AVFAudio.framework/Versions/A/AVFAudio 0x7fff6f69c000 - 0x7fff6f6aefff com.apple.CMImaging (1.0 - 81.37) /System/Library/PrivateFrameworks/CMImaging.framework/Versions/A/CMImaging 0x7fff73936000 - 0x7fff73941fff com.apple.SymptomAnalytics (1.0 - 1431.100.22) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomAnalytics.framework/Versions/A/SymptomAnalytics 0x7fff73b57000 - 0x7fff73b6ffff com.apple.SymptomPresentationFeed (1.0 - 1431.100.22) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomPresentationFeed.framework/Versions/A/SymptomPresentationFeed 0x7fff776db000 - 0x7fff776e2fff libRosetta.dylib (203.42) /usr/lib/libRosetta.dylib External Modification Summary: Calls made by other processes targeting this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by all processes on this machine: task_for_pid: 0 thread_create: 0 thread_set_state: 0 VM Region Summary: ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%) Writable regions: Total=921.8M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=921.8M(100%) VIRTUAL REGION REGION TYPE SIZE COUNT (non-coalesced) =========== ======= ======= Accelerate framework 256K 2 Activity Tracing 256K 1 CG backing stores 3240K 6 CG image 332K 31 CoreAnimation 11.5M 26 CoreGraphics 12K 2 CoreUI image data 4384K 34 Foundation 36K 2 Kernel Alloc Once 8K 1 MALLOC 308.1M 485 MALLOC guard page 32K 8 MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated) MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated) Mach message 24K 2 OpenGL GLSL 384K 4 STACK GUARD 88K 22 Stack 131.7M 23 Stack Guard 56.0M 1 VM_ALLOCATE 79.8M 296 __DATA 30.6M 584 __DATA_CONST 23.8M 262 __DATA_DIRTY 1257K 171 __FONT_DATA 4K 1 __GLSLBUILTINS 5176K 1 __LINKEDIT 590.8M 140 __OBJC_RO 70.2M 1 __OBJC_RW 2480K 2 __TEXT 579.9M 561 __UNICODE 588K 1 mapped file 424.9M 51 shared memory 2972K 27 =========== ======= ======= TOTAL 2.6G 2750 TOTAL, minus reserved VM space 2.3G 2750 Log: UCSF ChimeraX version: 1.2.5 (2021-05-24) © 2016-2021 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 INTEL-16.2.16 OpenGL renderer: Intel(R) Iris(TM) Plus Graphics 640 OpenGL vendor: Intel Inc.Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro14,1 Processor Name: Dual-Core Intel Core i5 Processor Speed: 2.3 GHz Number of Processors: 1 Total Number of Cores: 2 L2 Cache (per Core): 256 KB L3 Cache: 4 MB Hyper-Threading Technology: Enabled Memory: 8 GB System Firmware Version: 429.100.7.0.0 SMC Version (system): 2.43f11 Software: System Software Overview: System Version: macOS 11.3 (20E232) Kernel Version: Darwin 20.4.0 Time since boot: 38 days 4:55 Graphics/Displays: Intel Iris Plus Graphics 640: Chipset Model: Intel Iris Plus Graphics 640 Type: GPU Bus: Built-In VRAM (Dynamic, Max): 1536 MB Vendor: Intel Device ID: 0x5926 Revision ID: 0x0006 Metal Family: Supported, Metal GPUFamily macOS 2 Displays: Color LCD: Display Type: Built-In Retina LCD Resolution: 2560 x 1600 Retina Framebuffer Depth: 24-Bit Color (ARGB8888) Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: Yes Connection Type: Internal Locale: (None, 'UTF-8') PyQt5 5.15.2, Qt 5.15.2 Installed Packages: alabaster: 0.7.12 appdirs: 1.4.4 appnope: 0.1.2 Babel: 2.9.1 backcall: 0.2.0 blockdiag: 2.0.1 certifi: 2020.12.5 cftime: 1.5.0 chardet: 3.0.4 ChimeraX-AddCharge: 1.0.1 ChimeraX-AddH: 2.1.6 ChimeraX-AlignmentAlgorithms: 2.0 ChimeraX-AlignmentHdrs: 3.2 ChimeraX-AlignmentMatrices: 2.0 ChimeraX-Alignments: 2.1 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.0 ChimeraX-Atomic: 1.13.2 ChimeraX-AtomicLibrary: 3.1.3 ChimeraX-AtomSearch: 2.0 ChimeraX-AtomSearchLibrary: 1.0 ChimeraX-AxesPlanes: 2.0 ChimeraX-BasicActions: 1.1 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 1.1 ChimeraX-BondRot: 2.0 ChimeraX-BugReporter: 1.0 ChimeraX-BuildStructure: 2.5.2 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.1 ChimeraX-ButtonPanel: 1.0 ChimeraX-CageBuilder: 1.0 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.1 ChimeraX-ChemGroup: 2.0 ChimeraX-Clashes: 2.1 ChimeraX-ColorActions: 1.0 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.2.1 ChimeraX-CommandLine: 1.1.4 ChimeraX-ConnectStructure: 2.0 ChimeraX-Contacts: 1.0 ChimeraX-Core: 1.2.5 ChimeraX-CoreFormats: 1.0 ChimeraX-coulombic: 1.1.1 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0 ChimeraX-DataFormats: 1.1 ChimeraX-Dicom: 1.0 ChimeraX-DistMonitor: 1.1.3 ChimeraX-DistUI: 1.0 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ExperimentalCommands: 1.0 ChimeraX-FileHistory: 1.0 ChimeraX-FunctionKey: 1.0 ChimeraX-Geometry: 1.1 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.0 ChimeraX-Hbonds: 2.1 ChimeraX-Help: 1.1 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.0 ChimeraX-ImageFormats: 1.1 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-Label: 1.0 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.1 ChimeraX-Map: 1.0.2 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0 ChimeraX-MapFilter: 2.0 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.0 ChimeraX-Markers: 1.0 ChimeraX-Mask: 1.0 ChimeraX-MatchMaker: 1.2.1 ChimeraX-MDcrds: 2.2 ChimeraX-MedicalToolbar: 1.0.1 ChimeraX-Meeting: 1.0 ChimeraX-MLP: 1.1 ChimeraX-mmCIF: 2.3 ChimeraX-MMTF: 2.1 ChimeraX-Modeller: 1.0.1 ChimeraX-ModelPanel: 1.0.1 ChimeraX-ModelSeries: 1.0 ChimeraX-Mol2: 2.0 ChimeraX-Morph: 1.0 ChimeraX-MouseModes: 1.1 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nucleotides: 2.0.1 ChimeraX-OpenCommand: 1.5 ChimeraX-PDB: 2.4.1 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.1 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.0.1 ChimeraX-PubChem: 2.0.1 ChimeraX-ReadPbonds: 1.0 ChimeraX-Registration: 1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-ResidueFit: 1.0 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 2.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.4 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0 ChimeraX-SeqView: 2.3 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0 ChimeraX-Shortcuts: 1.0 ChimeraX-ShowAttr: 1.0 ChimeraX-ShowSequences: 1.0 ChimeraX-SideView: 1.0 ChimeraX-Smiles: 2.0.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.3.1 ChimeraX-STL: 1.0 ChimeraX-Storm: 1.0 ChimeraX-Struts: 1.0 ChimeraX-Surface: 1.0 ChimeraX-SwapAA: 2.0 ChimeraX-SwapRes: 2.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.0.1 ChimeraX-ToolshedUtils: 1.2 ChimeraX-Tug: 1.0 ChimeraX-UI: 1.7.6 ChimeraX-uniprot: 2.1 ChimeraX-UnitCell: 1.0 ChimeraX-ViewDockX: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0 ChimeraX-WebServices: 1.0 ChimeraX-Zone: 1.0 colorama: 0.4.3 comtypes: 1.1.7 cxservices: 1.0 cycler: 0.10.0 Cython: 0.29.21 decorator: 5.0.9 distlib: 0.3.1 docutils: 0.16 filelock: 3.0.12 funcparserlib: 0.3.6 grako: 3.16.5 h5py: 2.10.0 html2text: 2020.1.16 idna: 2.10 ihm: 0.17 imagecodecs: 2020.5.30 imagesize: 1.2.0 ipykernel: 5.3.4 ipython: 7.18.1 ipython-genutils: 0.2.0 jedi: 0.17.2 Jinja2: 2.11.2 jupyter-client: 6.1.7 jupyter-core: 4.7.1 kiwisolver: 1.3.1 line-profiler: 2.1.2 lxml: 4.6.2 lz4: 3.1.0 MarkupSafe: 2.0.1 matplotlib: 3.3.2 matplotlib-inline: 0.1.2 msgpack: 1.0.0 netCDF4: 1.5.4 networkx: 2.5 numexpr: 2.7.3 numpy: 1.19.2 numpydoc: 1.1.0 openvr: 1.14.1501 packaging: 20.9 ParmEd: 3.2.0 parso: 0.7.1 pexpect: 4.8.0 pickleshare: 0.7.5 Pillow: 7.2.0 pip: 21.0.1 pkginfo: 1.5.0.1 prompt-toolkit: 3.0.18 psutil: 5.7.2 ptyprocess: 0.7.0 pycollada: 0.7.1 pydicom: 2.0.0 Pygments: 2.7.1 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 2.4.7 PyQt5-commercial: 5.15.2 PyQt5-sip: 12.8.1 PyQtWebEngine-commercial: 5.15.2 python-dateutil: 2.8.1 pytz: 2021.1 pyzmq: 22.0.3 qtconsole: 4.7.7 QtPy: 1.9.0 RandomWords: 0.3.0 requests: 2.24.0 scipy: 1.5.2 setuptools: 50.3.2 sfftk-rw: 0.6.7.dev1 six: 1.15.0 snowballstemmer: 2.1.0 sortedcontainers: 2.2.2 Sphinx: 3.2.1 sphinxcontrib-applehelp: 1.0.2 sphinxcontrib-blockdiag: 2.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 suds-jurko: 0.6 tables: 3.6.1 tifffile: 2020.9.3 tinyarray: 1.2.3 tornado: 6.1 traitlets: 5.0.5 urllib3: 1.25.11 wcwidth: 0.2.5 webcolors: 1.11.1 wheel: 0.36.0 wheel-filename: 1.3.0 }}} " defect closed normal Graphics nonchimerax all ChimeraX