id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
3785	Registration: time data does not match format	Tom Goddard	Greg Couch	"The following error at startup in the registration code is from ticket #3778 from David Herreros.

The bug is that the preregistration file before July 16, 2020 contained dates formatted in the user's locale.  Greg Couch changed that to format them in English locale.  

https://github.com/RBVI/ChimeraX/commit/19b63e6791a9be894ef56276c18496d63c0b7fa4

So some users will now have preregistration files that have dates in both formats.  This bug report comes from a user in Spain.  The registration parsing code now only handles the English locale dates in the preregistration file and raises an error on startup with the Spanish locale dates.  I guess the code will now have to try both date formats.


The following bug report has been submitted:
Platform:        Linux-5.4.0-48-generic-x86_64-with-debian-buster-sid
ChimeraX Version: 1.1 (2020-09-09 22:22:27 UTC)
Description
Openning .seg file returns the error: ""ValueError: Attempted to add model mask.seg #2 to scene twice""

Log:
Startup Errors  
---  
error | Bundle 'ChimeraX-Registration' custom initialization failed  
warning | Traceback (most recent call last):  
File
""/home/davidherreros/scipion3/software/em/chimerax-1.1/lib/python3.7/site-
packages/chimerax/registration/nag.py"", line 266, in _strptime  
month = _months.index(month_name)  
ValueError: tuple.index(x): x not in tuple  
  
During handling of the above exception, another exception occurred:  
  
Traceback (most recent call last):  
File
""/home/davidherreros/scipion3/software/em/chimerax-1.1/lib/python3.7/site-
packages/chimerax/core/toolshed/info.py"", line 342, in initialize  
api._api_caller.initialize(api, session, self)  
File
""/home/davidherreros/scipion3/software/em/chimerax-1.1/lib/python3.7/site-
packages/chimerax/core/toolshed/__init__.py"", line 1265, in initialize  
return cls._get_func(api, ""initialize"")(session, bi)  
File
""/home/davidherreros/scipion3/software/em/chimerax-1.1/lib/python3.7/site-
packages/chimerax/registration/__init__.py"", line 41, in initialize  
nag(session)  
File
""/home/davidherreros/scipion3/software/em/chimerax-1.1/lib/python3.7/site-
packages/chimerax/registration/nag.py"", line 38, in nag  
_check_usage(session)  
File
""/home/davidherreros/scipion3/software/em/chimerax-1.1/lib/python3.7/site-
packages/chimerax/registration/nag.py"", line 192, in _check_usage  
usage = _get_usage()  
File
""/home/davidherreros/scipion3/software/em/chimerax-1.1/lib/python3.7/site-
packages/chimerax/registration/nag.py"", line 228, in _get_usage  
usage[""dates""].append(_strptime(value))  
File
""/home/davidherreros/scipion3/software/em/chimerax-1.1/lib/python3.7/site-
packages/chimerax/registration/nag.py"", line 275, in _strptime  
raise ValueError(""time data does not match format"")  
ValueError: time data does not match format  
  
UCSF ChimeraX version: 1.1 (2020-09-09)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  
"	defect	closed	moderate	1.2	Core		fixed						all	ChimeraX