id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
354	fitmap search error	Elaine Meng	Tom Goddard	"Maybe this map file is bad somehow. I assigned symmetry and wrote it out from Chimera1. I didn't have this problem with other maps, e.g. from molmap.

If I open the attached map (D2 symmetry) and then use commands

vol #1 level .008 color 50,50,50,50
open 1gcn
fit #2 in #1 search 5

Log says:
fitmap #2 inMap #1 search 5
Traceback (most recent call last):
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages/chimerax/cmd_line/gui.py"", line 167, in execute
cmd.run(cmd_text)
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages/chimerax/core/commands/cli.py"", line 2200, in run
results.append(ci.function(session, **kw_args))
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages/chimerax/core/map/fit/fitcmd.py"", line 114, in fitmap
max_steps, grid_step_min, grid_step_max, log)
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages/chimerax/core/map/fit/fitcmd.py"", line 396, in fit_search
me, shift, rotate, max_steps, grid_step_min, grid_step_max, stop_cb)
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages/chimerax/core/map/fit/search.py"", line 65, in fit_search
volume.data.symmetries)
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages/chimerax/core/map/fit/search.py"", line 388, in unique_symmetry_position
from ...geometry.place import distance
ImportError: cannot import name 'distance'
"	defect	closed	major		Volume Data		fixed						all	ChimeraX