id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 3481 scipy can't import _uarray chimerax-bug-report@… Greg Couch "{{{ The following bug report has been submitted: Platform: Windows-10-10.0.18362 ChimeraX Version: 1.0 (2020-06-04 23:15:07 UTC) Description (Describe the actions that caused this problem to occur here) Log: UCSF ChimeraX version: 1.0 (2020-06-04) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open 5l1f format mmcif fromDatabase pdb 5l1f title: AMPA subtype ionotropic glutamate receptor GluA2 in complex with noncompetitive inhibitor Perampanel [more info...] Chain information for 5l1f #1 --- Chain | Description A B C D | Glutamate receptor 2 Non-standard residues in 5l1f #1 --- 6ZP — 2-(6'-oxo-1'-phenyl[1',6'-dihydro[2,3'-bipyridine]]-5'-yl)benzonitrile NAG — N-acetyl-D-glucosamine > cartoon style modeHelix tube Traceback (most recent call last): File ""D:\Chimera\ChimeraX 1.0\bin\lib\site- packages\chimerax\core\triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""D:\Chimera\ChimeraX 1.0\bin\lib\site- packages\chimerax\atomic\structure.py"", line 1562, in _update_graphics_if_needed s[i]._update_graphics_if_needed() File ""D:\Chimera\ChimeraX 1.0\bin\lib\site- packages\chimerax\atomic\structure.py"", line 300, in _update_graphics_if_needed self._create_ribbon_graphics() File ""D:\Chimera\ChimeraX 1.0\bin\lib\site- packages\chimerax\atomic\structure.py"", line 553, in _create_ribbon_graphics ribbons_drawing.compute_ribbons(self) File ""D:\Chimera\ChimeraX 1.0\bin\lib\site- packages\chimerax\atomic\ribbon.py"", line 586, in compute_ribbons _make_ribbon_graphics(structure, self) File ""D:\Chimera\ChimeraX 1.0\bin\lib\site- packages\chimerax\atomic\ribbon.py"", line 128, in _make_ribbon_graphics centers = _arc_helix_geometry(coords, xs_mgr, displays, start, end, geometry) File ""D:\Chimera\ChimeraX 1.0\bin\lib\site- packages\chimerax\atomic\ribbon.py"", line 957, in _arc_helix_geometry hc = HelixCylinder(coords[start:end]) File ""D:\Chimera\ChimeraX 1.0\bin\lib\site-packages\chimerax\atomic\sse.py"", line 187, in __init__ self._try_curved() File ""D:\Chimera\ChimeraX 1.0\bin\lib\site-packages\chimerax\atomic\sse.py"", line 392, in _try_curved self._curved_optimize(c_center, c_axis, c_radius) File ""D:\Chimera\ChimeraX 1.0\bin\lib\site-packages\chimerax\atomic\sse.py"", line 436, in _curved_optimize opt = OptArc(self.coords, center, axis, major_radius) File ""D:\Chimera\ChimeraX 1.0\bin\lib\site-packages\chimerax\atomic\sse.py"", line 85, in __init__ from scipy.optimize import minimize File ""D:\Chimera\ChimeraX 1.0\bin\lib\site-packages\scipy\\__init__.py"", line 156, in from . import fft File ""D:\Chimera\ChimeraX 1.0\bin\lib\site-packages\scipy\fft\\__init__.py"", line 76, in from ._basic import ( File ""D:\Chimera\ChimeraX 1.0\bin\lib\site-packages\scipy\fft\\_basic.py"", line 1, in from scipy._lib.uarray import generate_multimethod, Dispatchable File ""D:\Chimera\ChimeraX 1.0\bin\lib\site-packages\scipy\\_lib\uarray.py"", line 27, in from ._uarray import * File ""D:\Chimera\ChimeraX 1.0\bin\lib\site- packages\scipy\\_lib\\_uarray\\__init__.py"", line 114, in from ._backend import * File ""D:\Chimera\ChimeraX 1.0\bin\lib\site- packages\scipy\\_lib\\_uarray\\_backend.py"", line 15, in from . import _uarray # type: ignore ImportError: DLL load failed: The specified module could not be found. Error processing trigger ""graphics update"": ImportError: DLL load failed: The specified module could not be found. File ""D:\Chimera\ChimeraX 1.0\bin\lib\site- packages\scipy\\_lib\\_uarray\\_backend.py"", line 15, in from . import _uarray # type: ignore See log for complete Python traceback. OpenGL version: 3.3.0 NVIDIA 382.05 OpenGL renderer: GeForce 940M/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation Manufacturer: LENOVO Model: 20BVA00UCD OS: Microsoft Windows 10 Pro (Build 18363) Memory: 16,861,487,104 MaxProcessMemory: 137,438,953,344 CPU: 4 Intel(R) Core(TM) i5-5200U CPU @ 2.20GHz"" PyQt version: 5.12.3 Compiled Qt version: 5.12.4 Runtime Qt version: 5.12.8 }}} " defect closed normal Depiction can't reproduce Tom Goddard all ChimeraX