id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 3477 file names with spaces tony.schaefer@… Eric Pettersen "{{{ The following bug report has been submitted: Platform: Windows-10-10.0.17763 ChimeraX Version: 1.1.dev202007022309 (2020-07-02 23:09:11 UTC) Description the open command gives a 'no such database' error when I give it an absolute path on another hard drive and the filename has spaces It works fine if I click the file on the 'Recent' view or with the File -> Open method. If I copy+paste the command on the log I get the error. If I click the command on the log (executable command links) it does work. Log: Startup Errors --- error | Bundle 'ChimeraX-Registration' custom initialization failed warning | Traceback (most recent call last): File ""D:\ChimeraX 1.1.dev202007022309\bin\lib\site- packages\chimerax\core\toolshed\info.py"", line 342, in initialize api._api_caller.initialize(api, session, self) File ""D:\ChimeraX 1.1.dev202007022309\bin\lib\site- packages\chimerax\core\toolshed\\__init__.py"", line 1599, in initialize return cls._get_func(api, ""initialize"")(session, bi) File ""D:\ChimeraX 1.1.dev202007022309\bin\lib\site- packages\chimerax\registration\\__init__.py"", line 41, in initialize nag(session) File ""D:\ChimeraX 1.1.dev202007022309\bin\lib\site- packages\chimerax\registration\nag.py"", line 32, in nag if not check_registration(logger=session.logger): File ""D:\ChimeraX 1.1.dev202007022309\bin\lib\site- packages\chimerax\registration\nag.py"", line 54, in check_registration return _check_expiration(param, logger) File ""D:\ChimeraX 1.1.dev202007022309\bin\lib\site- packages\chimerax\registration\nag.py"", line 136, in _check_expiration expires = _expiration_time(param) File ""D:\ChimeraX 1.1.dev202007022309\bin\lib\site- packages\chimerax\registration\nag.py"", line 157, in _expiration_time locale.setlocale(locale.LC_TIME, ""en_US.UTF-8"") File ""D:\ChimeraX 1.1.dev202007022309\bin\lib\locale.py"", line 608, in setlocale return _setlocale(category, locale) locale.Error: unsupported locale setting > cd ""C:\Users\Tony Schaefer/Desktop"" Current working directory is: C:\Users\Tony Schaefer\Desktop UCSF ChimeraX version: 1.1.dev202007022309 (2020-07-02) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open ""D:\SEQCROW_SCRATCH\phenol Wed Jul 1 19.15.55 2020\phenol.out"" format > out coordsets true Opened D:\SEQCROW_SCRATCH\phenol Wed Jul 1 19.15.55 2020\phenol.out as a ORCA output file movie No such database 'D' > help open > pwd Current working directory is: C:\Users\Tony Schaefer\Desktop > open ""D:/SEQCROW_SCRATCH/phenol Wed Jul 1 19.15.55 2020/phenol.out"" Opened D:/SEQCROW_SCRATCH/phenol Wed Jul 1 19.15.55 2020/phenol.out as a ORCA output file > open > https://raw.githubusercontent.com/QChASM/AaronTools.py/master/Substituents/26-F-Ph.xyz > dataFormat xyz Summary of feedback from opening //raw.githubusercontent.com/QChASM/AaronTools.py/master/Substituents/26-F-Ph.xyz fetched from https --- notes | Fetching compressed 26-F-Ph.xyz from https://raw.githubusercontent.com/QChASM/AaronTools.py/master/Substituents/26-F-Ph.xyz Downloaded 26-F-Ph.xyz to C:\Users\Tony Schaefer\Downloads\26-F-Ph.xyz Opened C:\Users\Tony Schaefer\Downloads\26-F-Ph.xyz as a XYZ file > open ""C:/Users/Tony Schaefer/Desktop/asdf.xyz"" Opened C:/Users/Tony Schaefer/Desktop/asdf.xyz as a XYZ file > open ""C:/Users/Tony Schaefer/Desktop/asdf.xyz"" Opened C:/Users/Tony Schaefer/Desktop/asdf.xyz as a XYZ file > open ""C:/Users/Tony Schaefer/Desktop/phenol test.xyz"" Opened C:/Users/Tony Schaefer/Desktop/phenol test.xyz as a XYZ file > open D:SEQCROW_SCRATCH/asdf.xyz Opened D:SEQCROW_SCRATCH/asdf.xyz as a XYZ file No such database 'D' > open ""C:/Users/Tony Schaefer/Desktop/phenol test.xyz"" Opened C:/Users/Tony Schaefer/Desktop/phenol test.xyz as a XYZ file > open ""D:/SEQCROW_SCRATCH/phenol Wed Jul 1 19.15.55 2020/phenol.xyz"" Opened D:/SEQCROW_SCRATCH/phenol Wed Jul 1 19.15.55 2020/phenol.xyz as a XYZ file No such database 'D' > ui tool show Shell > D:/SEQCROW_SCRATCH/phenol Wed Jul 1 19.15.55 2020/phenol.xyz > ui tool show ""Build QM Input"" > help open > open smiles:C Translated SMILES to 3D structure via NCI web service (SMILES: C) > hide #1 models > hide #2 models > hide #!4 models > hide #3 models > hide #!5 models > hide #9 models > hide #8 models > hide #!7 models > hide #6 models adding test open to queue job started: local ORCA job ""test open"" > ui tool show ""Job Queue"" job finished: local ORCA job ""test open"" > open ""D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out"" > coordsets true Summary of feedback from opening D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out --- note | C:\Users\Tony Schaefer\AppData\Local\UCSF\ChimeraX\1.1\site- packages\SEQCROW\io.py:40: UserWarning: energy plot could not be opened there might be a mismatch between energy entries and structure entries in D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out ""there might be a mismatch between energy entries and structure entries in %s"" % path) Opened D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out as a ORCA output file movie > ui tool show Shell No such database 'D' > open ""D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out"" > coordsets true Summary of feedback from opening D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out --- note | C:\Users\Tony Schaefer\AppData\Local\UCSF\ChimeraX\1.1\site- packages\SEQCROW\io.py:40: UserWarning: energy plot could not be opened there might be a mismatch between energy entries and structure entries in D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out ""there might be a mismatch between energy entries and structure entries in %s"" % path) Opened D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out as a ORCA output file movie > open ""D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out"" > coordsets true Opened D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out as a ORCA output file movie > open ""D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out"" > coordsets true Opened D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out as a ORCA output file movie > open ""D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out"" > coordsets true Opened D:\SEQCROW_SCRATCH\test open Fri Jul 3 13.32.13 2020\test_open.out as a ORCA output file movie No such database 'D' OpenGL version: 3.3.0 NVIDIA 445.75 OpenGL renderer: GeForce RTX 2070/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation Manufacturer: To Be Filled By O.E.M. Model: To Be Filled By O.E.M. OS: Microsoft Windows 10 Education (Build 17763) Memory: 17,107,533,824 MaxProcessMemory: 137,438,953,344 CPU: 16 AMD Ryzen 7 2700X Eight-Core Processor "" PyQt version: 5.12.3 Compiled Qt version: 5.12.4 Runtime Qt version: 5.12.9 }}} " defect closed normal Input/Output not a bug all ChimeraX