id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 3261 Make model-panel coloring issue command olibclarke@… Eric Pettersen "{{{ The following bug report has been submitted: Platform: Darwin-19.4.0-x86_64-i386-64bit ChimeraX Version: 0.93 (2020-04-03) Description Hi, When I edit the color of a model or selection, by clicking the color well in the model panel, no color command is issued to the log. By contrast, if I edit the color of a volume by clicking the color well in the Volume Viewer, color commands are printed to the log. Also, Tom mentioned on the chimeraxbb that this works correctly when usoing the Actions>Color menu - I do not have a Color submenu in the Action menu. Perhaps this was added in the 1.0 release candidate cycle? I am using the stable release (0.93) for compatibility with ISOLDE. Cheers Oli Log: > camera ortho > cofr centerOfView > alias focus view cofr false > alias crosshair_on cofr centerofview showpivot true > alias crosshair_off cofr centerofview showpivot false > alias symclip clip near -$1 far $1 position cofr > alias cootmode_wire ~rib; disp; color gold; color byhet; size #* stickradius > 0.08; volume #* capfaces false style mesh meshlighting false squaremesh > false color #307fff step 1; surface cap false; lighting flat depthcue true > depthcuestart 0.2 depthcueend 1.0; graphics silhouettes false; set bgcolor > black; symclip 15 > alias cootmode_surf ~rib; disp; color gold; color byhet; size #* stickradius > 0.08; volume #* capfaces false style surface color #307fff3c step 1; surface > cap false; lighting flat depthcue true depthcuestart 0.2 depthcueend 1.0; > graphics silhouettes false; set bgcolor black; symclip 15 > alias cootmode_surf_white ~rib; disp; color orange red; color byhet; size #* > stickradius 0.08; volume #* capfaces false style surface color #002fff3d > step 1; surface cap false; lighting flat depthcue true depthcuestart 0.2 > depthcueend 1.0; graphics silhouettes false; set bgcolor white; symclip 15 UCSF ChimeraX version: 0.93 (2020-04-03) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open ""/Users/olibclarke1/Library/Application Support/ChimeraX/0.93/site- > packages/chimerax/isolde/demo_data/6out/6out.pdb"" 6out.pdb title: Asymmetric focused reconstruction of human norovirus gi.1 norwalk strain VLP asymmetric unit In T=3 symmetry [more info...] Chain information for 6out.pdb #1 --- Chain | Description A B C | capsid protein VP1 > open ""/Users/olibclarke1/Dropbox/chimera > models/resolve_cryoem_2_b_blur_100.mrc"" format mrc Opened resolve_cryoem_2_b_blur_100.mrc, grid size 320,320,320, pixel 0.83, shown at level 0.0236, step 2, values float32 > cootmode_surf_white Changed 11622 bond radii > volume #2 color #051c843d > volume #2 color #051c853d > volume #2 color #051d883d > volume #2 color #041e933d > volume #2 color #041f973d > volume #2 color #04209c3d > volume #2 color #04209e3d > volume #2 color #04209e3e > volume #2 color #04209e42 > ui mousemode rightMode clip > close all > open ""/Users/olibclarke1/Dropbox/chimera > models/oli_initial.updated_modified_real_space_refined.pdb"" format PDB Chain information for oli_initial.updated_modified_real_space_refined.pdb #1 --- Chain | Description B | No description available D | No description available > open ""/Users/olibclarke1/Dropbox/chimera > models/resolve_cryoem_2_b_blur_100.mrc"" format mrc Opened resolve_cryoem_2_b_blur_100.mrc, grid size 320,320,320, pixel 0.83, shown at level 0.0236, step 2, values float32 > cootmode_surf Changed 6192 bond radii > symclip 10 > help help:user/preferences.html#clipping > select #2 2 models selected > select #2 2 models selected > select clear > select #2 2 models selected > select clear > select up 2 atoms, 1 bond, 1 model selected > select up 7 atoms, 6 bonds, 1 model selected > select up 118 atoms, 120 bonds, 1 model selected > select up 3995 atoms, 4115 bonds, 1 model selected OpenGL version: 4.1 ATI-3.8.24 OpenGL renderer: AMD Radeon Pro 5500M OpenGL Engine OpenGL vendor: ATI Technologies Inc. }}} " defect closed normal General Controls fixed Tom Goddard all ChimeraX