id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
3128	Open dialog generates 'open2' command	novakw@…	Eric Pettersen	"{{{
The following bug report has been submitted:
Platform:        Darwin-19.3.0-x86_64-i386-64bit
ChimeraX Version: 0.94 (2020-05-01)
Description
open any file generates an error. 

open2 ""/Users/novakw/Desktop/Mpro/Mpro full XChem screen - pdbs - active site non-covalent - ver-2020-03-24/Mpro-x1077.pdb""

copying the above and changing open2 to open corrects the bug.

I figured COVID is a good excuse to learn the new Chimera! You all look great in the splash screen too.

Best,
Wally

Log:
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 0.94.dev202005010036 (2020-05-01)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> help help:quickstart

> open2 ""/Users/novakw/Desktop/Mpro/Mpro full XChem screen - pdbs - active
> site non-covalent - ver-2020-03-24/Mpro-x1077.pdb""

Unknown command: open2 ""/Users/novakw/Desktop/Mpro/Mpro full XChem screen -
pdbs - active site non-covalent - ver-2020-03-24/Mpro-x1077.pdb""  

> open2 ""/Users/novakw/Desktop/Mpro/Mpro full XChem screen - pdbs - active
> site non-covalent - ver-2020-03-24/Mpro-x0161.pdb""

Unknown command: open2 ""/Users/novakw/Desktop/Mpro/Mpro full XChem screen -
pdbs - active site non-covalent - ver-2020-03-24/Mpro-x0161.pdb""  

> open2 ""/Users/novakw/Desktop/Mpro/Mpro full XChem screen - pdbs - active
> site non-covalent - ver-2020-03-24/Mpro-x0434.pdb"" format pdb

Unknown command: open2 ""/Users/novakw/Desktop/Mpro/Mpro full XChem screen -
pdbs - active site non-covalent - ver-2020-03-24/Mpro-x0434.pdb"" format pdb  

> open2 /Users/novakw/Downloads/sketcher.sdf

Unknown command: open2 /Users/novakw/Downloads/sketcher.sdf  

> open /Users/novakw/Downloads/sketcher.sdf

> close all

> open ""/Users/novakw/Desktop/Mpro/Mpro full XChem screen - pdbs - active site
> non-covalent - ver-2020-03-24/Mpro-x1077.pdb""

Mpro-x1077.pdb title:  
\--- [more info...]  
  
Chain information for Mpro-x1077.pdb #1  
---  
Chain | Description  
A | No description available  
  
Non-standard residues in Mpro-x1077.pdb #1  
---  
DMS — (DMS)  
LIG — (LIG)  
  




OpenGL version: 4.1 ATI-3.5.5
OpenGL renderer: AMD Radeon Pro 560X OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:

    Hardware Overview:

      Model Name: iMac
      Model Identifier: iMac19,2
      Processor Name: 6-Core Intel Core i5
      Processor Speed: 3 GHz
      Number of Processors: 1
      Total Number of Cores: 6
      L2 Cache (per Core): 256 KB
      L3 Cache: 9 MB
      Memory: 16 GB
      Boot ROM Version: 1037.80.34.0.0
      SMC Version (system): 2.47f3

Software:

    System Software Overview:

      System Version: macOS 10.15.3 (19D76)
      Kernel Version: Darwin 19.3.0
      Time since boot: 6 days 1:12

Graphics/Displays:

    Radeon Pro 560X:

      Chipset Model: Radeon Pro 560X
      Type: GPU
      Bus: PCIe
      PCIe Lane Width: x8
      VRAM (Total): 4 GB
      Vendor: AMD (0x1002)
      Device ID: 0x67ef
      Revision ID: 0x00c2
      ROM Revision: 113-C981AA-042
      VBIOS Version: 113-C9819A1X-009
      EFI Driver Version: 01.B1.042
      Metal: Supported, feature set macOS GPUFamily2 v1
      Displays:
        iMac:
          Display Type: Built-In Retina LCD
          Resolution: 4096 x 2304 Retina
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: No
          Connection Type: Internal

}}}
"	defect	accepted	normal		Input/Output				Elaine Meng				all	ChimeraX