id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 2543 Clipper: No module named 'chimerax.core.graphics.clipping' joel.mackay@… Tristan Croll "{{{ The following bug report has been submitted: Platform: Windows-10-10.0.17134 ChimeraX Version: 0.9 (2019-06-06) Description (Describe the actions that caused this problem to occur here) Log: UCSF ChimeraX version: 0.9 (2019-06-06) © 2016-2019 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > toolshed show ISOLDE > set selectionWidth 4 Done loading forcefield > open 1a0m structureFactors true Summary of feedback from opening 1a0m fetched from pdb --- warning | No free flags detected in this dataset! Automatically generated a new random set with 452 free from 9265 observed reflections. You should save your data to a new MTZ file and use this for any future rebuilding/refinement. notes | Fetching compressed mmCIF 1a0m from http://files.rcsb.org/download/1a0m.cif Fetching compressed 1a0m structure factors from http://files.rcsb.org/download/1a0m-sf.cif Resolution: 1.0944213038232702 1a0m title: 1.1 angstrom crystal structure of A-conotoxin [TYR15]-epi [more info...] Chain information for 1a0m --- Chain | Description 1.3/A 1.3/B | α-conotoxin [TYR15]-epi Non-standard residues in 1a0m #1.3 --- NH2 — amino group > save ""C:\\\Users\\\joel/Desktop/1a0m.mtz"" #1 Writing data to: '/*/*/[FOBS, SIGFOBS]' > set bgColor white Traceback (most recent call last): File ""C:\Program Files\ChimeraX\bin\lib\site- packages\chimerax\mouse_modes\mousemodes.py"", line 457, in _wheel_event f.wheel(MouseEvent(event)) File ""C:\Program Files\ChimeraX\bin\lib\site- packages\chimerax\mouse_modes\std_modes.py"", line 389, in wheel self.zoom(100*d*psize, stereo_scaling = not event.alt_down()) File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 168, in zoom self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier) File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 113, in far_clip from chimerax.core.graphics.clipping import CameraClipPlane ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping' ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping' File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 113, in far_clip from chimerax.core.graphics.clipping import CameraClipPlane See log for complete Python traceback. Traceback (most recent call last): File ""C:\Program Files\ChimeraX\bin\lib\site- packages\chimerax\mouse_modes\mousemodes.py"", line 457, in _wheel_event f.wheel(MouseEvent(event)) File ""C:\Program Files\ChimeraX\bin\lib\site- packages\chimerax\mouse_modes\std_modes.py"", line 389, in wheel self.zoom(100*d*psize, stereo_scaling = not event.alt_down()) File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 168, in zoom self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier) File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 113, in far_clip from chimerax.core.graphics.clipping import CameraClipPlane ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping' ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping' File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 113, in far_clip from chimerax.core.graphics.clipping import CameraClipPlane See log for complete Python traceback. Traceback (most recent call last): File ""C:\Program Files\ChimeraX\bin\lib\site- packages\chimerax\mouse_modes\mousemodes.py"", line 457, in _wheel_event f.wheel(MouseEvent(event)) File ""C:\Program Files\ChimeraX\bin\lib\site- packages\chimerax\mouse_modes\std_modes.py"", line 389, in wheel self.zoom(100*d*psize, stereo_scaling = not event.alt_down()) File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 168, in zoom self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier) File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 113, in far_clip from chimerax.core.graphics.clipping import CameraClipPlane ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping' ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping' File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 113, in far_clip from chimerax.core.graphics.clipping import CameraClipPlane See log for complete Python traceback. Traceback (most recent call last): File ""C:\Program Files\ChimeraX\bin\lib\site- packages\chimerax\mouse_modes\mousemodes.py"", line 457, in _wheel_event f.wheel(MouseEvent(event)) File ""C:\Program Files\ChimeraX\bin\lib\site- packages\chimerax\mouse_modes\std_modes.py"", line 389, in wheel self.zoom(100*d*psize, stereo_scaling = not event.alt_down()) File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 168, in zoom self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier) File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 113, in far_clip from chimerax.core.graphics.clipping import CameraClipPlane ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping' ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping' File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 113, in far_clip from chimerax.core.graphics.clipping import CameraClipPlane See log for complete Python traceback. Traceback (most recent call last): File ""C:\Program Files\ChimeraX\bin\lib\site- packages\chimerax\mouse_modes\mousemodes.py"", line 457, in _wheel_event f.wheel(MouseEvent(event)) File ""C:\Program Files\ChimeraX\bin\lib\site- packages\chimerax\mouse_modes\std_modes.py"", line 389, in wheel self.zoom(100*d*psize, stereo_scaling = not event.alt_down()) File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 168, in zoom self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier) File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 113, in far_clip from chimerax.core.graphics.clipping import CameraClipPlane ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping' ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping' File ""C:\Users\joel\AppData\Local\UCSF\ChimeraX\0.9\site- packages\chimerax\clipper\mousemodes.py"", line 113, in far_clip from chimerax.core.graphics.clipping import CameraClipPlane See log for complete Python traceback. OpenGL version: 3.3.0 NVIDIA 416.34 OpenGL renderer: GeForce GTX 1080/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation }}} " defect closed normal Third Party duplicate Conrad Huang all ChimeraX