id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 2531 """spotlight moved"" trigger handler using dead Structure" chimerax-bug-report@… Tristan Croll "{{{ The following bug report has been submitted: Platform: Linux-3.10.0-957.21.3.el7.x86_64-x86_64-with-centos-7.6.1810-Core ChimeraX Version: 0.91 (2019-10-10) Description (Describe the actions that caused this problem to occur here) Log: UCSF ChimeraX version: 0.91 (2019-10-10) © 2016-2019 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open /nfs4/suffolk/WorkComplexIC/anaa2/20190412w1118DmcomplexI/model_building/working/1_Isolde_chains_working/B/chainB_working1.pdb chainB_working1.pdb title: SWISS-MODEL SERVER (https://swissmodel.expasy.org) Template Alignment: 6g72.1 [more info...] Chain information for chainB_working1.pdb #1 --- Chain | Description B | No description available Non-standard residues in chainB_working1.pdb #1 --- SF4 — (SF4) > set bgColor white > open /nfs4/suffolk/WorkComplexIC/anaa2/20190412w1118DmcomplexI/model_building/1_inital_maps/3_3_angstroms/postprocess_job591.mrc Opened postprocess_job591.mrc, grid size 450,450,450, pixel 1.05, shown at level 0.00849, step 2, values float32 > isolde start > set selectionWidth 4 chainB_working1.pdb title: SWISS-MODEL SERVER (https://swissmodel.expasy.org) Template Alignment: 6g72.1 [more info...] Chain information for chainB_working1.pdb --- Chain | Description 1.3/B | No description available Non-standard residues in chainB_working1.pdb #1.3 --- SF4 — (SF4) Done loading forcefield > clipper spotlight radius 11.00 Setting spotlight mode for model 1.3 to True > clipper spotlight radius 9.00 Setting spotlight mode for model 1.3 to True > clipper spotlight radius 25.00 Setting spotlight mode for model 1.3 to True > select :SF4 8 atoms, 18 pseudobonds, 2 models selected > toolshed show Shell /usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/IPython/core/history.py:226: UserWarning: IPython History requires SQLite, your history will not be saved warn(""IPython History requires SQLite, your history will not be saved"") 6 atoms were automatically renamed to match the template: S3->S2, FE4->FE3, FE2->FE4, FE3->FE2, S4->S3, S2->S4 > select clear > sequence chain /B Alignment identifier is 1.3.B Bad residue number: match Adding hydrogens Summary of feedback from adding hydrogens to chainB_working1.pdb #1.3 --- notes | No usable SEQRES records for chainB_working1.pdb (#1.3) chain B; guessing termini instead Chain-initial residues that are actual N termini: /B GLN 17 Chain-initial residues that are not actual N termini: Chain-final residues that are actual C termini: /B LYS 198 Chain-final residues that are not actual C termini: 107 hydrogen bonds 1453 hydrogens added > select clear > hide HC > view sel > cofr centerOfView > select clear > select clear > select clear > view sel > cofr centerOfView > view sel > cofr centerOfView > select clear > view sel > cofr centerOfView > graphics silhouettes true > view sel > cofr centerOfView > select clear > select clear > view sel > cofr centerOfView > view sel > cofr centerOfView > select clear > select clear > view sel > cofr centerOfView > select clear > select clear > view sel > cofr centerOfView > view sel > cofr centerOfView > select clear > view sel > cofr centerOfView > view sel > cofr centerOfView > view sel > cofr centerOfView > select clear > select clear > view sel > cofr centerOfView > select clear > view sel > cofr centerOfView Not saving entity_poly_seq for non-authoritative sequences > toolshed show ""Model Panel"" > close #1.3 > open /nfs4/suffolk/WorkComplexIC/anaa2/20190412w1118DmcomplexI/model_building/working/1_Isolde_chains_working/I/chainI_working1.pdb chainI_working1.pdb title: SWISS-MODEL SERVER (https://swissmodel.expasy.org) NDUFS8 [more info...] Chain information for chainI_working1.pdb #2 --- Chain | Description I | No description available Non-standard residues in chainI_working1.pdb #2 --- SF4 — (SF4) chainI_working1.pdb title: SWISS-MODEL SERVER (https://swissmodel.expasy.org) NDUFS8 [more info...] Chain information for chainI_working1.pdb --- Chain | Description 2.3/I | No description available Non-standard residues in chainI_working1.pdb #2.3 --- SF4 — (SF4) Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. Traceback (most recent call last): File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/core/triggerset.py"", line 130, in invoke return self._func(self._name, data) File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1289, in _box_moved_cb self._update_box() File ""/home/anaa2/.local/share/ChimeraX/0.91/site- packages/chimerax/clipper/symmetry.py"", line 1302, in _update_box atoms = self.structure.atoms File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 43, in _getattr_ return base.__getattr__(self, attr_name, look_in_class=base) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 39, in _getattr_ return look_in_class._attr_registration.get_attr(attr_name) File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError Error processing trigger ""spotlight moved"": AttributeError: Execution of 'Structure' object's 'atoms' property raised AttributeError File ""/usr/mbu/software/chimerax/chimerax-2019.10.10/lib/python3.7/site- packages/chimerax/atomic/attr_registration.py"", line 65, in get_attr raise AttributeError(""Execution of '%s' object's '%s' property raised AttributeError"" % (self.class_.__name__, attr_name)) from None See log for complete Python traceback. OpenGL version: 3.3.0 NVIDIA 418.67 OpenGL renderer: GeForce GTX 1080/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation }}} " defect closed normal Third Party fixed all ChimeraX