id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
2465	set silhouettes false → glBlitFramebuffer: invalid operation	victoria.ruiz.serra@…	Tom Goddard	"{{{
The following bug report has been submitted:
Platform:        Linux-4.15.0-64-generic-x86_64-with-debian-buster-sid
ChimeraX Version: 0.9 (2019-06-05)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 0.9 (2019-06-05)  
© 2016-2019 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /home/vruizser/Descargas/3bp5.pdb1.gz

3bp5.pdb1 title:  
Crystal structure of the mouse Pd-1 and Pd-L2 complex [more info...]  
  
Chain information for 3bp5.pdb1 #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  
Non-standard residues in 3bp5.pdb1 #1  
---  
GOL — glycerol (glycerin; propane-1,2,3-triol)  
  

> set bgColor white

> set silhouettes true

> preset ""molecular surfaces"" ""atomic coloring (transparent)""

Changed 0 atom styles  
Preset expands to these ChimeraX commands: style (protein|nucleic|solvent) &
@@draw_mode=0 stick; surface; color fromatoms targ s trans 70  

> select /B

1601 atoms, 1543 bonds selected  

> color selAtoms thistle

> select /A

960 atoms, 923 bonds selected  

> color selAtoms ""pale turquoise""

> preset ""molecular surfaces"" ""atomic coloring (transparent)""

Changed 0 atom styles  
Preset expands to these ChimeraX commands: style (protein|nucleic|solvent) &
@@draw_mode=0 stick; surface; color fromatoms targ s trans 70  

> select /B:112

12 atoms, 12 bonds selected  

Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms', or 'random' or a keyword  

Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms', or 'random' or a keyword  

> color selAtoms crimson

> show selAtoms

> select /A

960 atoms, 923 bonds selected  

> color selAtoms ""cadet blue""

> color selAtoms ""white smoke""

> color selAtoms ""light slate gray""

> preset ""molecular surfaces"" ""atomic coloring (transparent)""

Changed 0 atom styles  
Preset expands to these ChimeraX commands: style (protein|nucleic|solvent) &
@@draw_mode=0 stick; surface; color fromatoms targ s trans 70  

> select /B

1601 atoms, 1543 bonds selected  

> color selAtoms ""lavender blush""

> preset ""molecular surfaces"" ""atomic coloring (transparent)""

Changed 0 atom styles  
Preset expands to these ChimeraX commands: style (protein|nucleic|solvent) &
@@draw_mode=0 stick; surface; color fromatoms targ s trans 70  

> color selAtoms ""peach puff""

> preset ""molecular surfaces"" ""atomic coloring (transparent)""

Changed 0 atom styles  
Preset expands to these ChimeraX commands: style (protein|nucleic|solvent) &
@@draw_mode=0 stick; surface; color fromatoms targ s trans 70  

> color selAtoms ""old lace""

> preset ""molecular surfaces"" ""atomic coloring (transparent)""

Changed 0 atom styles  
Preset expands to these ChimeraX commands: style (protein|nucleic|solvent) &
@@draw_mode=0 stick; surface; color fromatoms targ s trans 70  

> color selAtoms ""light gray""

> preset ""molecular surfaces"" ""atomic coloring (transparent)""

Changed 0 atom styles  
Preset expands to these ChimeraX commands: style (protein|nucleic|solvent) &
@@draw_mode=0 stick; surface; color fromatoms targ s trans 70  

> lighting soft

> lighting full

> lighting flat

> lighting simple

> lighting shadows true

> set silhouettes false

An error occurred in drawing the scene. Redrawing graphics is now stopped to
avoid a continuous stream of error messages. To restart graphics use the
command ""graphics restart"" after changing the settings that caused the error.  
  
Traceback (most recent call last):  
File ""/usr/lib/ucsf-chimerax/lib/python3.7/site-
packages/chimerax/core/updateloop.py"", line 72, in draw_new_frame  
view.draw(check_for_changes = False)  
File ""/usr/lib/ucsf-chimerax/lib/python3.7/site-
packages/chimerax/core/graphics/view.py"", line 162, in draw  
self._draw_scene(camera, drawings)  
File ""/usr/lib/ucsf-chimerax/lib/python3.7/site-
packages/chimerax/core/graphics/view.py"", line 226, in _draw_scene  
r.outline.set_outline_mask() # copy depth to outline framebuffer  
File ""/usr/lib/ucsf-chimerax/lib/python3.7/site-
packages/chimerax/core/graphics/opengl.py"", line 1658, in set_outline_mask  
cfb.copy_to_framebuffer(mfb, color=False)  
File ""/usr/lib/ucsf-chimerax/lib/python3.7/site-
packages/chimerax/core/graphics/opengl.py"", line 2078, in copy_to_framebuffer  
GL.glBlitFramebuffer(0, 0, w, h, 0, 0, w, h, what, GL.GL_NEAREST)  
File ""src/errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glBlitFramebuffer,  
cArguments = (  
0,  
0,  
1272,  
813,  
0,  
0,  
1272,  
813,  
256,  
GL_NEAREST,  
)  
)  
  




OpenGL version: 3.3 (Core Profile) Mesa 19.0.8
OpenGL renderer: llvmpipe (LLVM 8.0, 256 bits)
OpenGL vendor: VMware, Inc.

}}}
"	defect	closed	normal		Graphics		nonchimerax						all	ChimeraX