id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 2290 Basic Actions: showing ribbons unintuitive yazan.abbas@… Tom Goddard "{{{ The following bug report has been submitted: Platform: Linux-4.15.0-55-generic-x86_64-with-debian-stretch-sid ChimeraX Version: 0.91 (2019-08-01) Description Cartoon refused to show until after fiddling around with show/hide selection, show/hide models, select/deselect and show/hide surface Log: UCSF ChimeraX version: 0.91 (2019-08-01) © 2016-2019 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open /home/yazan/Dropbox/Abbas_etal_2019_brainV- ATPase/Figures/FigureS10_compare_d/sub_d_compare_prefit.cxs opened ChimeraX session > toolshed show ""Basic Actions"" > view list Named views: 607t, closeup1, yeast_intact > view 607t > show tvV0a target c > show tvV0b target c > show tvV0cring target c > show tvV0d target c > show tvV0e target c > show tvV0f target c > show tvVoa1 target c > select clear > color tvV0d #edd400 target c > select clear > save image /home/yazan/Dropbox/Abbas_etal_2019_brainV- ATPase/Figures/FigureS9_cring_in_rotstate2and3/output/6o7t.png width 3600 height 3600 transparentBackground true > lighting soft shadows true intensity 0.2 qualityOfShadows normal direction 1,1,-1 multiShadow 1024 > set silhouetteDepthJump 0.03 > set silhouetteDepthJump 0.02 > save image /home/yazan/Dropbox/Abbas_etal_2019_brainV- ATPase/Figures/FigureS9_cring_in_rotstate2and3/output/6o7t.png width 3600 height 3600 transparentBackground true > lighting soft shadows true intensity 0.2 qualityOfShadows normal direction 1,1,-1 multiShadow 64 Expected an objects specifier or a view name or a keyword > view list Named views: 607t, closeup1, yeast_intact > view yeast_intact > select up 481 atoms, 489 bonds, 3 models selected > select up 6331 atoms, 6482 bonds, 3 models selected > hide sel cartoons > color zone #1 near (#2.13-14,17) distance 7 update false > lighting soft shadows true intensity 0.2 qualityOfShadows normal direction 1,1,-1 multiShadow 1024 > surface dust #1 size 20 > surface dust #1 size 40 > save image /home/yazan/Dropbox/Abbas_etal_2019_brainV- ATPase/Figures/FigureS9_cring_in_rotstate2and3/output/6o7t_super_yeast.png width 3600 height 3600 transparentBackground true > hide #!4 models > select up 6331 atoms, 6482 bonds, 3 models selected > select up 6331 atoms, 6482 bonds, 3 models selected > select up 6331 atoms, 6482 bonds, 3 models selected > select up 6331 atoms, 6482 bonds, 3 models selected > select up 6331 atoms, 6482 bonds, 3 models selected > select up 6331 atoms, 6482 bonds, 3 models selected > select clear > save image /home/yazan/Dropbox/Abbas_etal_2019_brainV- ATPase/Figures/FigureS9_cring_in_rotstate2and3/output/yeast_intact_map.png width 3600 height 3600 transparentBackground true > view list Named views: 607t, closeup1, yeast_intact > view closeup1 > show #!3 models > surface dust #5 size 20 > surface dust #6 size 20 > surface dust #7 size 20 > hide #!3 models > show #!4 models > hide tvV0cring target c > hide tvV0b target c > hide tvVoa1 target c > lighting soft shadows true intensity 0.2 qualityOfShadows normal direction 1,1,-1 multiShadow 1024 > set silhouetteDepthJump 0.02 > set silhouetteDepthJump 0.01 > set silhouetteDepthJump 0.02 > save image /home/yazan/Dropbox/Abbas_etal_2019_brainV- ATPase/Figures/FigureS9_cring_in_rotstate2and3/output/closeup1.png width 3600 height 3600 transparentBackground true > lighting soft shadows true intensity 0.2 qualityOfShadows normal direction 1,1,-1 multiShadow 64 > save session /home/yazan/Dropbox/Abbas_etal_2019_brainV- ATPase/Figures/FigureS10_compare_d/sub_d_compare_prefit.cxs > show #!3 models > show V0d target c > hide #!3 models > show #!3 models > hide #!4 models > hide #!3 models > show #!3 models > show V0d target c > hide V0d target c > hide #!3 models > show #!3 models > hide #!3.30 models > show #!3.30 models > select V0d 2833 atoms, 2899 bonds, 1 model selected > show V0d target s > hide V0d target s > show V0d target c > select clear OpenGL version: 3.3.0 NVIDIA 418.56 OpenGL renderer: GeForce RTX 2070/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation }}} " enhancement closed normal Depiction not a bug Tom Goddard Elaine Meng all ChimeraX