id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
2239	MD Viewer: no ligand	jeandidier.marechal@…	Eric Pettersen	"{{{
The following bug report has been submitted:
Platform:        Darwin-18.6.0-x86_64-i386-64bit
ChimeraX Version: 0.91 (2019-07-16)
Description
Hi guys,

we are testing several things on ChimeraX. We have generated a single pdb file for a movie from chimera and loaded it in chimeraX. There is a diffusion of ligand happening but in chimeraX we can see nothing else than the protein...ligand is missing. Apparently there is some problem with the way chimeraX parses the pdb. 
Thank you

Log:
UCSF ChimeraX version: 0.91 (2019-07-16)  
© 2016-2019 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> toolshed show ""Molecular Dynamics Viewer""

Please register the custom scheme 'kmd' via
QWebEngineUrlScheme::registerScheme() before installing the custom scheme
handler.  

Chain information for structure #1  
---  
Chain | Description  
B | No description available  
  

> show

> show ligand




OpenGL version: 4.1 INTEL-12.9.22
OpenGL renderer: Intel HD Graphics 4000 OpenGL Engine
OpenGL vendor: Intel Inc.
File attachment: save_test.pdb

}}}

[attachment:""save_test.pdb""]
"	defect	closed	normal		Third Party		nonchimerax		chimera-programmers Elaine Meng				all	ChimeraX