id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
2013	Trouble pip-installing Pyyaml prereq for bundle	andresgineranton@…	Conrad Huang	"{{{
The following bug report has been submitted:
Platform:        Linux-4.18.0-20-generic-x86_64-with-debian-buster-sid
ChimeraX Version: 0.9 (2019-04-28)
Description
Hello, we are from Insilichem team at the UAB, Barcelona, Spain; and we are having troubles with the creation of a ChimeraX bundle. We have specified the Pyyaml package as a requeriment of our bundle; however when we install it, the installation fail trying to download the Pyyaml package. We obtain the next log:

Looking in indexes: https://pypi.org/simple, https://cxtoolshed.rbvi.ucsf.edu/pypi/ Processing ./Downloads/GaudiViewX-0.5-py3-none-any.whl Requirement already satisfied, skipping upgrade: ChimeraX-UI>=1.0 in /usr/lib/ucsf-chimerax/lib/python3.7/site-packages (from GaudiViewX==0.5) (1.0) Collecting Pyyaml>=5.0 (from GaudiViewX==0.5) Using cached https://files.pythonhosted.org/packages/9f/2c/9417b5c774792634834e730932745bc09a7d36754ca00acf1ccd1ac2594d/PyYAML-5.1.tar.gz Files/directories not found in /tmp/pip-install-qwkg5e4n/Pyyaml/pip-egg-info You are using pip version 19.0.3, however version 19.1.1 is available. You should consider upgrading via the 'pip install --upgrade pip' command.

OpenGL version: 4.5 (Core Profile) Mesa 18.2.8
OpenGL renderer: Mesa DRI Intel(R) HD Graphics 520 (Skylake GT2) 
OpenGL vendor: Intel Open Source Technology Center
File attachment: bundle_info.xml

}}}

[attachment:""bundle_info.xml""]
"	defect	closed	normal	0.91	Tool Shed		fixed						all	ChimeraX