id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 18656 Crash on exit chimerax-bug-report@… Tom Goddard "{{{ The following bug report has been submitted: Platform: macOS-12.0.1-arm64-arm-64bit ChimeraX Version: 1.10.dev202501170719 (2025-01-17 07:19:08 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. {""app_name"":""ChimeraX"",""timestamp"":""2025-08-28 14:56:05.00 +0200"",""app_version"":""1.10.0"",""slice_uuid"":""18de835b-eddc-3f3a-93bb-285f33da630d"",""build_version"":""1.10.0.0"",""platform"":1,""bundleID"":""edu.ucsf.cgl.ChimeraX"",""share_with_app_devs"":0,""is_first_party"":0,""bug_type"":""309"",""os_version"":""macOS 12.0.1 (21A559)"",""incident_id"":""3595E3DB-065F-46C7-B381-B3439F5916B6"",""name"":""ChimeraX""} { ""uptime"" : 38000, ""procLaunch"" : ""2025-08-28 14:36:43.2409 +0200"", ""procRole"" : ""Background"", ""version"" : 2, ""userID"" : 501, ""deployVersion"" : 210, ""modelCode"" : ""MacBookPro17,1"", ""procStartAbsTime"" : 916632215766, ""coalitionID"" : 2325, ""osVersion"" : { ""train"" : ""macOS 12.0.1"", ""build"" : ""21A559"", ""releaseType"" : ""User"" }, ""captureTime"" : ""2025-08-28 14:56:01.4602 +0200"", ""incident"" : ""3595E3DB-065F-46C7-B381-B3439F5916B6"", ""bug_type"" : ""309"", ""pid"" : 9014, ""procExitAbsTime"" : 933155098864, ""translated"" : false, ""cpuType"" : ""ARM-64"", ""procName"" : ""ChimeraX"", ""procPath"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/MacOS\/ChimeraX"", ""bundleInfo"" : {""CFBundleShortVersionString"":""1.10.0"",""CFBundleVersion"":""1.10.0.0"",""CFBundleIdentifier"":""edu.ucsf.cgl.ChimeraX""}, ""storeInfo"" : {""deviceIdentifierForVendor"":""1BC2B4F8-1EB7-5220-8FE0-B7CDC7F38667"",""thirdParty"":true}, ""parentProc"" : ""launchd"", ""parentPid"" : 1, ""coalitionName"" : ""edu.ucsf.cgl.ChimeraX"", ""crashReporterKey"" : ""8A55B74B-F213-3D41-5EA1-03E1CFE59D77"", ""wakeTime"" : 30, ""sleepWakeUUID"" : ""10DEB5E7-B141-4446-858A-036118E30ACA"", ""sip"" : ""enabled"", ""vmRegionInfo"" : ""0 is not in any region. Bytes before following region: 4337172480\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n __TEXT 102840000-102844000 [ 16K] r-x\/r-x SM=COW ...acOS\/ChimeraX"", ""isCorpse"" : 1, ""exception"" : {""codes"":""0x0000000000000001, 0x0000000000000000"",""rawCodes"":[1,0],""type"":""EXC_BAD_ACCESS"",""signal"":""SIGSEGV"",""subtype"":""KERN_INVALID_ADDRESS at 0x0000000000000000""}, ""vmregioninfo"" : ""0 is not in any region. Bytes before following region: 4337172480\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n __TEXT 102840000-102844000 [ 16K] r-x\/r-x SM=COW ...acOS\/ChimeraX"", ""extMods"" : {""caller"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""system"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""targeted"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""warnings"":0}, ""faultingThread"" : 0, ""threads"" : [{""triggered"":true,""id"":466104,""threadState"":{""x"":[{""value"":0},{""value"":0},{""value"":1},{""value"":4563696280},{""value"":99},{""value"":105},{""value"":14},{""value"":0},{""value"":15415480155115330023},{""value"":15415480159367289959},{""value"":14757395258967641293},{""value"":4294967286},{""value"":4563696210},{""value"":0},{""value"":53},{""value"":1531904},{""value"":328},{""value"":9053222192},{""value"":4574001472},{""value"":11},{""value"":4338009472,""symbolLocation"":0,""symbol"":""_main_thread""},{""value"":259},{""value"":316},{""value"":1},{""value"":4357801520,""symbolLocation"":0,""symbol"":""faulthandler_handlers""},{""value"":0},{""value"":129},{""value"":88},{""value"":0}],""flavor"":""ARM_THREAD_STATE64"",""lr"":{""value"":7539183964},""cpsr"":{""value"":1073741824},""fp"":{""value"":4563696352},""sp"":{""value"":4563696320},""esr"":{""value"":1442840704,""description"":"" Address size fault""},""pc"":{""value"":7538973112,""matchesCrashFrame"":1},""far"":{""value"":10905998248}},""name"":""CrBrowserMain"",""queue"":""com.apple.main-thread"",""frames"":[{""imageOffset"":39352,""symbol"":""__pthread_kill"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":29020,""symbol"":""pthread_kill"",""symbolLocation"":288,""imageIndex"":1},{""imageOffset"":269476,""symbol"":""raise"",""symbolLocation"":32,""imageIndex"":2},{""imageOffset"":2417160,""symbol"":""faulthandler_fatal_error"",""symbolLocation"":392,""imageIndex"":3},{""imageOffset"":17636,""symbol"":""_sigtramp"",""symbolLocation"":56,""imageIndex"":4},{""imageOffset"":367252,""imageIndex"":5},{""imageOffset"":3638384,""symbol"":""-[NSTouch dealloc]"",""symbolLocation"":48,""imageIndex"":6},{""imageOffset"":394100,""symbol"":""__RELEASE_OBJECTS_IN_THE_SET__"",""symbolLocation"":148,""imageIndex"":7},{""imageOffset"":393872,""symbol"":""-[__NSSetM dealloc]"",""symbolLocation"":148,""imageIndex"":7},{""imageOffset"":1991660,""symbol"":""-[NSEvent dealloc]"",""symbolLocation"":68,""imageIndex"":6},{""imageOffset"":86980,""imageIndex"":5},{""imageOffset"":134552,""imageIndex"":5},{""imageOffset"":135076,""imageIndex"":5},{""imageOffset"":556296,""symbol"":""QGuiApplicationPrivate::~QGuiApplicationPrivate()"",""symbolLocation"":492,""imageIndex"":8},{""imageOffset"":37408,""symbol"":""QApplicationPrivate::~QApplicationPrivate()"",""symbolLocation"":12,""imageIndex"":9},{""imageOffset"":896912,""symbol"":""QObject::~QObject()"",""symbolLocation"":2180,""imageIndex"":10},{""imageOffset"":535368,""symbol"":""QGuiApplication::~QGuiApplication()"",""symbolLocation"":652,""imageIndex"":8},{""imageOffset"":45336,""symbol"":""QApplication::~QApplication()"",""symbolLocation"":1096,""imageIndex"":9},{""imageOffset"":1430396,""symbol"":""sipQApplication::~sipQApplication()"",""symbolLocation"":52,""imageIndex"":11},{""imageOffset"":1376780,""symbol"":""cleanup_on_exit(_object*, _object*)"",""symbolLocation"":68,""imageIndex"":12},{""imageOffset"":1007332,""symbol"":""cfunction_vectorcall_NOARGS"",""symbolLocation"":88,""imageIndex"":3},{""imageOffset"":2409280,""symbol"":""atexit_callfuncs"",""symbolLocation"":492,""imageIndex"":3},{""imageOffset"":2194280,""symbol"":""Py_FinalizeEx"",""symbolLocation"":104,""imageIndex"":3},{""imageOffset"":2386344,""symbol"":""Py_RunMain"",""symbolLocation"":476,""imageIndex"":3},{""imageOffset"":2392180,""symbol"":""pymain_main"",""symbolLocation"":52,""imageIndex"":3},{""imageOffset"":2392116,""symbol"":""Py_Main"",""symbolLocation"":36,""imageIndex"":3},{""imageOffset"":15764,""symbol"":""main"",""symbolLocation"":128,""imageIndex"":13},{""imageOffset"":20724,""symbol"":""start"",""symbolLocation"":520,""imageIndex"":14}]},{""id"":466144,""frames"":[{""imageOffset"":20672,""symbol"":""__psynch_cvwait"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":31412,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1228,""imageIndex"":1},{""imageOffset"":1502040,""symbol"":""blas_thread_server"",""symbolLocation"":360,""imageIndex"":15},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466145,""frames"":[{""imageOffset"":20672,""symbol"":""__psynch_cvwait"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":31412,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1228,""imageIndex"":1},{""imageOffset"":1502040,""symbol"":""blas_thread_server"",""symbolLocation"":360,""imageIndex"":15},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466146,""frames"":[{""imageOffset"":20672,""symbol"":""__psynch_cvwait"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":31412,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1228,""imageIndex"":1},{""imageOffset"":1502040,""symbol"":""blas_thread_server"",""symbolLocation"":360,""imageIndex"":15},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466147,""frames"":[{""imageOffset"":20672,""symbol"":""__psynch_cvwait"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":31412,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1228,""imageIndex"":1},{""imageOffset"":1502040,""symbol"":""blas_thread_server"",""symbolLocation"":360,""imageIndex"":15},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466148,""frames"":[{""imageOffset"":20672,""symbol"":""__psynch_cvwait"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":31412,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1228,""imageIndex"":1},{""imageOffset"":1502040,""symbol"":""blas_thread_server"",""symbolLocation"":360,""imageIndex"":15},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466149,""frames"":[{""imageOffset"":20672,""symbol"":""__psynch_cvwait"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":31412,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1228,""imageIndex"":1},{""imageOffset"":1502040,""symbol"":""blas_thread_server"",""symbolLocation"":360,""imageIndex"":15},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466150,""frames"":[{""imageOffset"":20672,""symbol"":""__psynch_cvwait"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":31412,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1228,""imageIndex"":1},{""imageOffset"":1502040,""symbol"":""blas_thread_server"",""symbolLocation"":360,""imageIndex"":15},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466193,""name"":""ThreadPoolForegroundWorker"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77356364,""imageIndex"":16},{""imageOffset"":77353696,""imageIndex"":16},{""imageOffset"":77353132,""imageIndex"":16},{""imageOffset"":77352848,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466194,""name"":""ThreadPoolBackgroundWorker"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77356364,""imageIndex"":16},{""imageOffset"":77353696,""imageIndex"":16},{""imageOffset"":77353000,""imageIndex"":16},{""imageOffset"":77352908,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466197,""name"":""ThreadPoolForegroundWorker"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77356364,""imageIndex"":16},{""imageOffset"":77353696,""imageIndex"":16},{""imageOffset"":77353132,""imageIndex"":16},{""imageOffset"":77352848,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466198,""name"":""ThreadPoolForegroundWorker"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77356364,""imageIndex"":16},{""imageOffset"":77353696,""imageIndex"":16},{""imageOffset"":77353132,""imageIndex"":16},{""imageOffset"":77352848,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466199,""name"":""ThreadPoolForegroundWorker"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77356364,""imageIndex"":16},{""imageOffset"":77353696,""imageIndex"":16},{""imageOffset"":77353132,""imageIndex"":16},{""imageOffset"":77352848,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466203,""name"":""ThreadPoolSingleThreadSharedForeground0"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77356364,""imageIndex"":16},{""imageOffset"":77353696,""imageIndex"":16},{""imageOffset"":77353176,""imageIndex"":16},{""imageOffset"":77352932,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466206,""name"":""NetworkService"",""frames"":[{""imageOffset"":51784,""symbol"":""kevent64"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":77650208,""imageIndex"":16},{""imageOffset"":77649684,""imageIndex"":16},{""imageOffset"":77251124,""imageIndex"":16},{""imageOffset"":76997832,""imageIndex"":16},{""imageOffset"":77411004,""imageIndex"":16},{""imageOffset"":77411388,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466207,""name"":""NetworkNotificationThreadMac"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":544312,""symbol"":""__CFRunLoopServiceMachPort"",""symbolLocation"":372,""imageIndex"":7},{""imageOffset"":537328,""symbol"":""__CFRunLoopRun"",""symbolLocation"":1212,""imageIndex"":7},{""imageOffset"":534164,""symbol"":""CFRunLoopRunSpecific"",""symbolLocation"":600,""imageIndex"":7},{""imageOffset"":413200,""symbol"":""-[NSRunLoop(NSRunLoop) runMode:beforeDate:]"",""symbolLocation"":236,""imageIndex"":17},{""imageOffset"":77855292,""imageIndex"":16},{""imageOffset"":77849548,""imageIndex"":16},{""imageOffset"":77251124,""imageIndex"":16},{""imageOffset"":76997832,""imageIndex"":16},{""imageOffset"":77411004,""imageIndex"":16},{""imageOffset"":77411388,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466208,""name"":""NetworkConfigWatcher"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77121132,""imageIndex"":16},{""imageOffset"":76786520,""imageIndex"":16},{""imageOffset"":77251124,""imageIndex"":16},{""imageOffset"":76997832,""imageIndex"":16},{""imageOffset"":77411004,""imageIndex"":16},{""imageOffset"":77411388,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466211,""name"":""ThreadPoolSingleThreadForegroundBlocking1"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77356364,""imageIndex"":16},{""imageOffset"":77353696,""imageIndex"":16},{""imageOffset"":77353220,""imageIndex"":16},{""imageOffset"":77352920,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466248,""name"":""ThreadPoolBackgroundWorker"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77356364,""imageIndex"":16},{""imageOffset"":77353696,""imageIndex"":16},{""imageOffset"":77353000,""imageIndex"":16},{""imageOffset"":77352908,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466249,""name"":""MemoryInfra"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77121132,""imageIndex"":16},{""imageOffset"":76786520,""imageIndex"":16},{""imageOffset"":77251124,""imageIndex"":16},{""imageOffset"":76997832,""imageIndex"":16},{""imageOffset"":77411004,""imageIndex"":16},{""imageOffset"":77411388,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466250,""name"":""ThreadPoolSingleThreadSharedBackgroundBlocking2"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77356364,""imageIndex"":16},{""imageOffset"":77353696,""imageIndex"":16},{""imageOffset"":77353044,""imageIndex"":16},{""imageOffset"":77352956,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":466291,""name"":""com.apple.NSEventThread"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":544312,""symbol"":""__CFRunLoopServiceMachPort"",""symbolLocation"":372,""imageIndex"":7},{""imageOffset"":537328,""symbol"":""__CFRunLoopRun"",""symbolLocation"":1212,""imageIndex"":7},{""imageOffset"":534164,""symbol"":""CFRunLoopRunSpecific"",""symbolLocation"":600,""imageIndex"":7},{""imageOffset"":1764388,""symbol"":""_NSEventThread"",""symbolLocation"":196,""imageIndex"":6},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":467967,""frames"":[{""imageOffset"":8892,""symbol"":""start_wqthread"",""symbolLocation"":0,""imageIndex"":1}]},{""id"":467968,""frames"":[{""imageOffset"":8892,""symbol"":""start_wqthread"",""symbolLocation"":0,""imageIndex"":1}]},{""id"":470131,""name"":""ThreadPoolForegroundWorker"",""frames"":[{""imageOffset"":6484,""symbol"":""mach_msg_trap"",""symbolLocation"":8,""imageIndex"":0},{""imageOffset"":7424,""symbol"":""mach_msg"",""symbolLocation"":76,""imageIndex"":0},{""imageOffset"":77624492,""imageIndex"":16},{""imageOffset"":77121252,""imageIndex"":16},{""imageOffset"":77356364,""imageIndex"":16},{""imageOffset"":77353696,""imageIndex"":16},{""imageOffset"":77353132,""imageIndex"":16},{""imageOffset"":77352848,""imageIndex"":16},{""imageOffset"":77514920,""imageIndex"":16},{""imageOffset"":29932,""symbol"":""_pthread_start"",""symbolLocation"":148,""imageIndex"":1},{""imageOffset"":8912,""symbol"":""thread_start"",""symbolLocation"":8,""imageIndex"":1}]},{""id"":471172,""frames"":[{""imageOffset"":8892,""symbol"":""start_wqthread"",""symbolLocation"":0,""imageIndex"":1}]},{""id"":471173,""frames"":[{""imageOffset"":8892,""symbol"":""start_wqthread"",""symbolLocation"":0,""imageIndex"":1}]},{""id"":474396,""frames"":[{""imageOffset"":8892,""symbol"":""start_wqthread"",""symbolLocation"":0,""imageIndex"":1}]},{""id"":475257,""frames"":[{""imageOffset"":8892,""symbol"":""start_wqthread"",""symbolLocation"":0,""imageIndex"":1}]}], ""usedImages"" : [ { ""source"" : ""P"", ""arch"" : ""arm64e"", ""base"" : 7538933760, ""size"" : 221184, ""uuid"" : ""c8524c02-b14f-30bd-a228-c44b4a448e68"", ""path"" : ""\/usr\/lib\/system\/libsystem_kernel.dylib"", ""name"" : ""libsystem_kernel.dylib"" }, { ""source"" : ""P"", ""arch"" : ""arm64e"", ""base"" : 7539154944, ""size"" : 53248, ""uuid"" : ""4786e19a-9312-38e6-80ef-9c1394548118"", ""path"" : ""\/usr\/lib\/system\/libsystem_pthread.dylib"", ""name"" : ""libsystem_pthread.dylib"" }, { ""source"" : ""P"", ""arch"" : ""arm64e"", ""base"" : 7537889280, ""size"" : 528384, ""uuid"" : ""002a39ae-6431-3b2e-85e7-c45fc2f95ad0"", ""path"" : ""\/usr\/lib\/system\/libsystem_c.dylib"", ""name"" : ""libsystem_c.dylib"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 4353523712, ""CFBundleShortVersionString"" : ""3.11.4, (c) 2001-2023 Python Software Foundation."", ""CFBundleIdentifier"" : ""org.python.python"", ""size"" : 3948544, ""uuid"" : ""88bffd37-99d8-36ab-9b95-9f54b30bd667"", ""path"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/Python"", ""name"" : ""Python"", ""CFBundleVersion"" : ""3.11.4"" }, { ""source"" : ""P"", ""arch"" : ""arm64e"", ""base"" : 7539261440, ""size"" : 32768, ""uuid"" : ""06ce953d-f22a-3724-b6d5-829b45179897"", ""path"" : ""\/usr\/lib\/system\/libsystem_platform.dylib"", ""name"" : ""libsystem_platform.dylib"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 4797235200, ""size"" : 688128, ""uuid"" : ""41d18909-c4c7-3b88-9995-ae4bf56f0f5f"", ""path"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/platforms\/libqcocoa.dylib"", ""name"" : ""libqcocoa.dylib"" }, { ""source"" : ""P"", ""arch"" : ""arm64e"", ""base"" : 7585177600, ""CFBundleShortVersionString"" : ""6.9"", ""CFBundleIdentifier"" : ""com.apple.AppKit"", ""size"" : 15409152, ""uuid"" : ""518f4e68-c324-320f-9d7f-85c224eae972"", ""path"" : ""\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit"", ""name"" : ""AppKit"", ""CFBundleVersion"" : ""2113"" }, { ""source"" : ""P"", ""arch"" : ""arm64e"", ""base"" : 7539474432, ""CFBundleShortVersionString"" : ""6.9"", ""CFBundleIdentifier"" : ""com.apple.CoreFoundation"", ""size"" : 5521408, ""uuid"" : ""b2ff96d0-ae99-31ef-9014-fc9964b4f3e0"", ""path"" : ""\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation"", ""name"" : ""CoreFoundation"", ""CFBundleVersion"" : ""1855.105"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 5033164800, ""size"" : 7192576, ""uuid"" : ""a8ea0a9b-1cec-33c6-98cc-0263b2b04f58"", ""path"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtGui.framework\/Versions\/A\/QtGui"", ""name"" : ""QtGui"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 4555866112, ""size"" : 4866048, ""uuid"" : ""c25ee3e6-f552-32f6-9638-d0c3c2b9e88b"", ""path"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWidgets.framework\/Versions\/A\/QtWidgets"", ""name"" : ""QtWidgets"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 4550148096, ""size"" : 4816896, ""uuid"" : ""33a8a2c3-65f0-3e8b-9d5d-2fe2096a312b"", ""path"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtCore.framework\/Versions\/A\/QtCore"", ""name"" : ""QtCore"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 4538236928, ""size"" : 3112960, ""uuid"" : ""01bdab74-5f85-357d-9ac4-a9ed2dc92340"", ""path"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWidgets.abi3.so"", ""name"" : ""QtWidgets.abi3.so"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 4460642304, ""size"" : 1818624, ""uuid"" : ""3d5b3918-05dc-3af6-9acc-86261296227e"", ""path"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtCore.abi3.so"", ""name"" : ""QtCore.abi3.so"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 4337172480, ""CFBundleShortVersionString"" : ""1.10.0"", ""CFBundleIdentifier"" : ""edu.ucsf.cgl.ChimeraX"", ""size"" : 16384, ""uuid"" : ""18de835b-eddc-3f3a-93bb-285f33da630d"", ""path"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/MacOS\/ChimeraX"", ""name"" : ""ChimeraX"", ""CFBundleVersion"" : ""1.10.0.0"" }, { ""source"" : ""P"", ""arch"" : ""arm64e"", ""base"" : 4337549312, ""size"" : 393216, ""uuid"" : ""86a8ba48-8bb4-3b30-9cda-051f73c74f44"", ""path"" : ""\/usr\/lib\/dyld"", ""name"" : ""dyld"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 4465655808, ""size"" : 21299200, ""uuid"" : ""9854a721-2573-3169-81ec-19ea40ce8077"", ""path"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libopenblas64_.0.dylib"", ""name"" : ""libopenblas64_.0.dylib"" }, { ""source"" : ""P"", ""arch"" : ""arm64"", ""base"" : 5771362304, ""size"" : 181551104, ""uuid"" : ""ab75c71e-3aa9-3a7f-981c-e8c6c2177118"", ""path"" : ""\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineCore.framework\/Versions\/A\/QtWebEngineCore"", ""name"" : ""QtWebEngineCore"" }, { ""source"" : ""P"", ""arch"" : ""arm64e"", ""base"" : 7555166208, ""CFBundleShortVersionString"" : ""6.9"", ""CFBundleIdentifier"" : ""com.apple.Foundation"", ""size"" : 4120576, ""uuid"" : ""de039f1b-ffe5-3644-a8cf-7ba52c32cd73"", ""path"" : ""\/System\/Library\/Frameworks\/Foundation.framework\/Versions\/C\/Foundation"", ""name"" : ""Foundation"", ""CFBundleVersion"" : ""1855.105"" } ], ""sharedCache"" : { ""base"" : 7535984640, ""size"" : 3072180224, ""uuid"" : ""a6162d66-93e3-3251-93cc-b11f7c8c830e"" }, ""vmSummary"" : ""ReadOnly portion of Libraries: Total=1.3G resident=0K(0%) swapped_out_or_unallocated=1.3G(100%)\nWritable regions: Total=2.1G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.1G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nAccelerate framework 768K 6 \nActivity Tracing 256K 1 \nCG backing stores 3136K 8 \nCG image 640K 28 \nColorSync 560K 28 \nCoreAnimation 544K 32 \nCoreGraphics 48K 3 \nCoreUI image data 4928K 44 \nFoundation 16K 1 \nKernel Alloc Once 32K 1 \nMALLOC 462.8M 93 \nMALLOC guard page 192K 11 \nMALLOC_MEDIUM (reserved) 840.0M 8 reserved VM address space (unallocated)\nMALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)\nOpenGL GLSL 384K 4 \nSTACK GUARD 448K 28 \nStack 127.6M 29 \nStack Guard 56.0M 1 \nVM_ALLOCATE 159.8M 140 \nVM_ALLOCATE (reserved) 160.0M 3 reserved VM address space (unallocated)\n__AUTH 2611K 335 \n__AUTH_CONST 20.4M 539 \n__CTF 759 1 \n__DATA 26.9M 681 \n__DATA_CONST 29.1M 690 \n__DATA_DIRTY 1948K 240 \n__FONT_DATA 4K 1 \n__GLSLBUILTINS 5176K 1 \n__LINKEDIT 599.4M 150 \n__OBJC_CONST 3909K 309 \n__OBJC_RO 81.8M 1 \n__OBJC_RW 3088K 1 \n__TEXT 755.6M 708 \n__UNICODE 588K 1 \ndyld private memory 1072K 3 \nmapped file 192.2M 51 \nshared memory 880K 14 \n=========== ======= ======= \nTOTAL 3.8G 4196 \nTOTAL, minus reserved VM space 2.5G 4196 \n"", ""legacyInfo"" : { ""threadTriggered"" : { ""name"" : ""CrBrowserMain"", ""queue"" : ""com.apple.main-thread"" } }, ""trialInfo"" : { ""rollouts"" : [ { ""rolloutId"" : ""60da5e84ab0ca017dace9abf"", ""factorPackIds"" : { }, ""deploymentId"" : 240000008 }, { ""rolloutId"" : ""607844aa04477260f58a8077"", ""factorPackIds"" : { ""SIRI_MORPHUN_ASSETS"" : ""6103050cbfe6dc472e1c982a"" }, ""deploymentId"" : 240000066 }, { ""rolloutId"" : ""602ad4dac86151000cf27e46"", ""factorPackIds"" : { ""SIRI_DICTATION_ASSETS"" : ""61ae8d06da72d16a4beb762e"" }, ""deploymentId"" : 240000305 }, { ""rolloutId"" : ""601d9415f79519000ccd4b69"", ""factorPackIds"" : { ""SIRI_TEXT_TO_SPEECH"" : ""61ef3bd729647d394933a0a6"" }, ""deploymentId"" : 240000416 }, { ""rolloutId"" : ""5fb4245a1bbfe8005e33a1e1"", ""factorPackIds"" : { }, ""deploymentId"" : 240000021 }, { ""rolloutId"" : ""5f72dc58705eff005a46b3a9"", ""factorPackIds"" : { }, ""deploymentId"" : 240000015 }, { ""rolloutId"" : ""60f8ddccefea4203d95cbeef"", ""factorPackIds"" : { }, ""deploymentId"" : 240000025 }, { ""rolloutId"" : ""5fc94383418129005b4e9ae0"", ""factorPackIds"" : { }, ""deploymentId"" : 240000614 }, { ""rolloutId"" : ""60186475825c62000ccf5450"", ""factorPackIds"" : { }, ""deploymentId"" : 240000083 }, { ""rolloutId"" : ""5ffde50ce2aacd000d47a95f"", ""factorPackIds"" : { }, ""deploymentId"" : 240000492 } ], ""experiments"" : [ ] } } Log: Startup Messages --- note | available bundle cache has not been initialized yet UCSF ChimeraX version: 1.10.dev202501170719 (2025-01-17) © 2016-2025 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open > /Users/usuario/Downloads/fold_ak1b_2short_f6_2_onlyhighplddt_ak1bshorter_f6shorter_even-2/fold_ak1b_2short_f6_2_onlyhighplddt_ak1bshorter_f6shorter_even_model_0.cif Chain information for fold_ak1b_2short_f6_2_onlyhighplddt_ak1bshorter_f6shorter_even_model_0.cif #1 --- Chain | Description A B | . C D | . Computing secondary structure OpenGL version: 4.1 Metal - 76.1 OpenGL renderer: Apple M1 OpenGL vendor: Apple Python: 3.11.4 Locale: UTF-8 Qt version: PyQt6 6.8.0, Qt 6.8.1 Qt runtime version: 6.8.1 Qt platform: cocoa Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro17,1 Chip: Apple M1 Total Number of Cores: 8 (4 performance and 4 efficiency) Memory: 16 GB System Firmware Version: 7429.41.5 OS Loader Version: 7429.41.5 Software: System Software Overview: System Version: macOS 12.0.1 (21A559) Kernel Version: Darwin 21.1.0 Time since boot: 2 days 2:39 Graphics/Displays: Apple M1: Chipset Model: Apple M1 Type: GPU Bus: Built-In Total Number of Cores: 8 Vendor: Apple (0x106b) Metal Family: Supported, Metal GPUFamily Apple 7 Displays: Color LCD: Display Type: Built-In Retina LCD Resolution: 2560 x 1600 Retina Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: No Connection Type: Internal VA2715-QHD: Resolution: 2560 x 1440 (QHD/WQHD - Wide Quad High Definition) UI Looks like: 2560 x 1440 @ 60.00Hz Mirror: Off Online: Yes Rotation: Supported Automatically Adjust Brightness: Yes Installed Packages: alabaster: 1.0.0 anyio: 4.8.0 appdirs: 1.4.4 appnope: 0.1.4 asttokens: 3.0.0 auditwheel: 6.2.0 babel: 2.16.0 beautifulsoup4: 4.12.3 blockdiag: 3.0.0 blosc2: 3.0.0 build: 1.2.1 certifi: 2023.11.17 cftime: 1.6.4.post1 charset-normalizer: 3.4.1 ChimeraX-AddCharge: 1.5.18 ChimeraX-AddH: 2.2.6 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.5 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.16.2 ChimeraX-AlphaFold: 1.0.1 ChimeraX-AltlocExplorer: 1.1.2 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.60 ChimeraX-AtomicLibrary: 14.1.11 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 3.0.0 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.2 ChimeraX-BuildStructure: 2.13.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.4.0 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.4 ChimeraX-ChemGroup: 2.0.1 ChimeraX-Clashes: 2.3 ChimeraX-ColorActions: 1.0.5 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.8 ChimeraX-CommandLine: 1.2.5 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.10.dev202501170719 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.4 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.3 ChimeraX-Dicom: 1.2.7 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.1.3 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.4.1 ChimeraX-Hbonds: 2.5 ChimeraX-Help: 1.3 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.3 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-KVFinder: 1.5.1 ChimeraX-Label: 1.1.14 ChimeraX-ListInfo: 1.2.2 ChimeraX-Log: 1.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.1 ChimeraX-Map: 1.3 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.1.6 ChimeraX-MCopy: 1.0 ChimeraX-MDcrds: 2.7.2 ChimeraX-MedicalToolbar: 1.1 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.14.2 ChimeraX-MMTF: 2.2 ChimeraX-ModelArchive: 1.0 ChimeraX-Modeller: 1.5.18 ChimeraX-ModelPanel: 1.5 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-MutationScores: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.2 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.14 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.7 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.4 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.2 ChimeraX-ProfileGrids: 1.0.1 ChimeraX-PubChem: 2.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.6.3 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.3.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.3 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.5.7 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.15 ChimeraX-Shape: 1.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.2.0 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-SimilarStructures: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.19.1 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2.3 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.43 ChimeraX-Umap: 1.0 ChimeraX-uniprot: 2.3.1 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.4.4 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.4 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.2.2 contourpy: 1.3.1 coverage: 7.6.10 cxservices: 1.2.3 cycler: 0.12.1 Cython: 3.0.10 debugpy: 1.8.12 decorator: 5.1.1 docutils: 0.21.2 executing: 2.1.0 filelock: 3.15.4 fonttools: 4.55.3 funcparserlib: 2.0.0a0 glfw: 2.8.0 grako: 3.16.5 h11: 0.14.0 h5py: 3.12.1 html2text: 2024.2.26 httpcore: 1.0.7 httpx: 0.28.1 idna: 3.10 ihm: 1.3 imagecodecs: 2024.6.1 imagesize: 1.4.1 iniconfig: 2.0.0 ipykernel: 6.29.5 ipython: 8.26.0 ipywidgets: 8.1.5 jedi: 0.19.1 Jinja2: 3.1.5 jupyter_client: 8.6.2 jupyter_core: 5.7.2 jupyterlab_widgets: 3.0.13 kiwisolver: 1.4.8 line_profiler: 4.1.3 lxml: 5.2.2 lz4: 4.3.3 MarkupSafe: 3.0.2 matplotlib: 3.9.2 matplotlib-inline: 0.1.7 msgpack: 1.0.8 ndindex: 1.9.2 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.3 nibabel: 5.2.0 nptyping: 2.5.0 numexpr: 2.10.2 numpy: 1.26.4 OpenMM: 8.2.0 openvr: 1.26.701 packaging: 23.2 ParmEd: 4.2.2 parso: 0.8.4 pep517: 0.13.1 pexpect: 4.9.0 pickleshare: 0.7.5 pillow: 10.4.0 pip: 24.2 pkginfo: 1.11.1 platformdirs: 4.3.6 pluggy: 1.5.0 prompt_toolkit: 3.0.48 psutil: 6.0.0 ptyprocess: 0.7.0 pure_eval: 0.2.3 py-cpuinfo: 9.0.0 pycollada: 0.8 pydicom: 2.4.4 pyelftools: 0.31 Pygments: 2.18.0 pynmrstar: 3.3.5 pynrrd: 1.0.0 PyOpenGL: 3.1.7 PyOpenGL-accelerate: 3.1.7 pyopenxr: 1.0.3401 pyparsing: 3.2.1 pyproject_hooks: 1.2.0 PyQt6-commercial: 6.8.0 PyQt6-Qt6: 6.8.1 PyQt6-WebEngine-commercial: 6.8.0 PyQt6-WebEngine-Qt6: 6.8.1 PyQt6_sip: 13.9.1 pytest: 8.3.4 pytest-cov: 6.0.0 python-dateutil: 2.9.0.post0 pytz: 2024.2 pyzmq: 26.2.0 qtconsole: 5.5.2 QtPy: 2.4.2 qtshim: 1.1 RandomWords: 0.4.0 requests: 2.32.3 scipy: 1.14.0 setuptools: 72.1.0 sfftk-rw: 0.8.1 six: 1.16.0 sniffio: 1.3.1 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.6 Sphinx: 8.0.2 sphinx-autodoc-typehints: 2.2.3 sphinxcontrib-applehelp: 2.0.0 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 2.0.0 sphinxcontrib-htmlhelp: 2.1.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 2.0.0 sphinxcontrib-serializinghtml: 2.0.0 stack-data: 0.6.3 superqt: 0.6.3 tables: 3.10.2 tcia_utils: 1.5.1 tifffile: 2024.7.24 tinyarray: 1.2.4 tornado: 6.4.2 traitlets: 5.14.3 typing_extensions: 4.12.2 tzdata: 2024.2 urllib3: 2.3.0 wcwidth: 0.2.13 webcolors: 24.6.0 wheel: 0.43.0 wheel-filename: 1.4.1 widgetsnbextension: 4.0.13 }}} " defect closed normal Window Toolkit duplicate all ChimeraX