id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 16826 Crash moving window between screens chimerax-bug-report@… Tom Goddard "{{{ The following bug report has been submitted: Platform: macOS-13.6-arm64-arm-64bit ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC) Description Last time you used ChimeraX it crashed. This is a known crash that we are unable to fix. Here is information that may help you avoid this crash. The Qt window toolkit crashed due to a display configuration change, typically when waking from sleep or when an external display is disconnected or connected. This has only been seen on Mac computers. We hope a newer version of Qt will fix it. We update ChimeraX daily builds whenever a new Qt is released. You can check here https://www.cgl.ucsf.edu/chimerax/docs/troubleshoot.html#macdisplay to see if it has been fixed in a newer ChimeraX. 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: { ""name"" : ""CrBrowserMain"", ""queue"" : ""com.apple.main-thread"" } }, ""logWritingSignature"" : ""b13539ef7fe50aec58034a6ed8b2e0f87e71e2c0"", ""trialInfo"" : { ""rollouts"" : [ { ""rolloutId"" : ""62699e1ec1ff2978b47f6c3b"", ""factorPackIds"" : { ""SIRI_FIND_MY_CONFIGURATION_FILES"" : ""652805151bce5442b8d752e1"" }, ""deploymentId"" : 240000031 }, { ""rolloutId"" : ""60186475825c62000ccf5450"", ""factorPackIds"" : { }, ""deploymentId"" : 240000083 } ], ""experiments"" : [ ] } } ===== Log before crash start ===== Startup Messages --- note | available bundle cache has not been initialized yet UCSF ChimeraX version: 1.9 (2024-12-11) © 2016-2024 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open ""/Users/rebaur/Team Nicolas Thoma Dropbox/Regina > Baur/KBTBD4_PP2A_Structure/250206_K4_PP2A_rightPP2AseqAfIsol-LOOPScOOT.pdb"" Chain information for 250206_K4_PP2A_rightPP2AseqAfIsol-LOOPScOOT.pdb #1 --- Chain | Description A B | No description available C D | No description available > open ""/Users/rebaur/Team Nicolas Thoma Dropbox/Regina > Baur/KBTBD4_PP2A_Structure/250205_KD4PA_C2symMap_Isolde.cxs"" Opened cryosparc_P2_J497_003_volume_map_sharp.mrc as #3, grid size 256,256,256, pixel 1.08, shown at level 0.128, step 1, values float32 Opened cryosparc_P2_J493_003_volume_map_sharp.mrc as #2, grid size 256,256,256, pixel 1.08, shown at level 0.194, step 1, values float32 opened ChimeraX session > hide #!3 models > hide #1 models > show #1 models > open ""/Users/rebaur/Team Nicolas Thoma Dropbox/Regina > Baur/KBTBD4_PP2A_Structure/250206_K4_PP2A_rightPP2AseqAfIsol-LOOPScOOT.pdb"" Chain information for 250206_K4_PP2A_rightPP2AseqAfIsol-LOOPScOOT.pdb #4 --- Chain | Description A B | No description available C D | No description available > hide #4 models > hide #1 models > show #4 models > show #!3 models > hide #!3 models > show #!3 models > show #1 models > hide #!3 models > hide #1 models > show #!3 models > hide #!3 models > select #1/A#4/A 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > color (#4 & sel) light sea green > select #1/B#4/B 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > color (#4 & sel) cornflower blue > select #A Expected an objects specifier or a keyword > select #A Expected an objects specifier or a keyword > select #A Expected an objects specifier or a keyword > select #b Expected an objects specifier or a keyword > open select /A 'select' has no suffix > select /A 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > ui tool show ""Color Actions"" > color sel medium blue > color sel deep sky blue > color sel cornflower blue > color sel dodger blue > select #1/C#4/C 13666 atoms, 13806 bonds, 1158 residues, 2 models selected > color (#4 & sel) #f67cffff > color (#4 & sel) #cb6bffff > color (#4 & sel) #ea9fffff > color (#4 & sel) #eb9effff > select #1/D#4/D 13666 atoms, 13806 bonds, 1158 residues, 2 models selected > ui tool show ""Color Actions"" > color sel plum > color sel thistle > select #1/C#4/C 13666 atoms, 13806 bonds, 1158 residues, 2 models selected > color sel light pink > color sel plum > show #!3 models > hide #!3 models > show #!3 models > color zone #3 near #4 distance 5 > select /a 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > select /A 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > ui tool show ""Color Actions"" > color sel sky blue > color sel light steel blue > select /B 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > ui tool show ""Color Actions"" > color sel powder blue > color zone #3 near #4 distance 5 > ~select Nothing selected > select /A:408 31 atoms, 31 bonds, 2 residues, 2 models selected > transparency #3 60\ Missing or invalid ""percent"" argument: Expected a number > transparency #3 60 > show sel & #4 atoms > select up 129 atoms, 131 bonds, 10 residues, 2 models selected > select up 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > select /A:409 31 atoms, 31 bonds, 2 residues, 2 models selected > show sel & #4 atoms > ui tool show ""Side View"" > select /B:408-409 62 atoms, 64 bonds, 4 residues, 2 models selected > show sel & #4 atoms > 357408-409 Unknown command: 357408-409 > select /B:357 26 atoms, 24 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /A:357 26 atoms, 24 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /C:456 22 atoms, 20 bonds, 2 residues, 2 models selected > select /C:468 30 atoms, 29 bonds, 2 residues, 2 models selected > select /D:468 30 atoms, 29 bonds, 2 residues, 2 models selected > select /D:469 15 atoms, 13 bonds, 2 residues, 2 models selected > select /D:459 19 atoms, 17 bonds, 2 residues, 2 models selected > select /D:453 21 atoms, 19 bonds, 2 residues, 2 models selected > select /D:456 22 atoms, 20 bonds, 2 residues, 2 models selected > select /D:459 19 atoms, 17 bonds, 2 residues, 2 models selected > select /D:460 24 atoms, 22 bonds, 2 residues, 2 models selected > select /D:462 34 atoms, 35 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide sel & #4 atoms > select /D:458 33 atoms, 33 bonds, 2 residues, 2 models selected > select /D:459 19 atoms, 17 bonds, 2 residues, 2 models selected > select /D:461 18 atoms, 16 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /D:460 24 atoms, 22 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide sel & #4 atoms > select /D:462 34 atoms, 35 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide sel & #4 atoms > select /D:464 28 atoms, 27 bonds, 2 residues, 2 models selected > show sel & #4 atoms > color (#4 & sel) byhetero > select /C:464 28 atoms, 27 bonds, 2 residues, 2 models selected > show sel & #4 atoms > color (#4 & sel) byhetero > select /A 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > ui tool show ""Color Actions"" > color sel pale violet red > select /B 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > ui tool show ""Color Actions"" > color sel orchid > color zone #3 near #4 distance 5 > select /C 13666 atoms, 13806 bonds, 1158 residues, 2 models selected > ui tool show ""Color Actions"" > color sel sky blue > select /D 13666 atoms, 13806 bonds, 1158 residues, 2 models selected > color sel cornflower blue > select /D 13666 atoms, 13806 bonds, 1158 residues, 2 models selected > color zone #3 near #4 distance 5 > transparency #3 70 > ~select Nothing selected > color #3-4 byhetero > se,ec Unknown command: se,ec > se,ec Unknown command: se,ec > se,ec Unknown command: se,ec > select /B 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > ui tool show ""Color Actions"" > color sel light coral > color zone #3 near #4 distance 5 > select /A 11993 atoms, 12167 bonds, 1018 residues, 2 models selected > ui tool show ""Color Actions"" > color sel pale violet red > select /C 13666 atoms, 13806 bonds, 1158 residues, 2 models selected > color sel sky blue > select /D 13666 atoms, 13806 bonds, 1158 residues, 2 models selected > color sel cornflower blue > select /D 13666 atoms, 13806 bonds, 1158 residues, 2 models selected > color zone #3 near #4 distance 5 > transparency #3 70 > color (#4 & sel) byhetero > ~select Nothing selected > select /D:417 26 atoms, 24 bonds, 2 residues, 2 models selected > select /D:423 24 atoms, 22 bonds, 2 residues, 2 models selected > select /D:424 19 atoms, 17 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /D:425 29 atoms, 29 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /A308/313:425 Nothing selected > select /A308-313 Nothing selected > select /A308-313 Nothing selected > select /A:308-313 146 atoms, 146 bonds, 12 residues, 2 models selected > select /B:308-313 146 atoms, 146 bonds, 12 residues, 2 models selected > show sel & #4 atoms > color (#4 & sel) byhetero > hide #!3 models > select /D:543 20 atoms, 18 bonds, 2 residues, 2 models selected > show sel & #4 atoms > show #!3 models > select all 51318 atoms, 51946 bonds, 4352 residues, 8 models selected > color (#4 & sel) byhetero > ~select Nothing selected > select /D:461 18 atoms, 16 bonds, 2 residues, 2 models selected > hide sel & #4 atoms > select /C:461 18 atoms, 16 bonds, 2 residues, 2 models selected > select /C:416 27 atoms, 25 bonds, 2 residues, 2 models selected > select /C:424 19 atoms, 17 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /C:425 29 atoms, 29 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /C:426 23 atoms, 21 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /A:408 31 atoms, 31 bonds, 2 residues, 2 models selected > select /A:405 20 atoms, 18 bonds, 2 residues, 2 models selected > select /A:406 27 atoms, 25 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide sel & #4 atoms > select /A:407 20 atoms, 18 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide sel & #4 cartoons > show sel & #4 cartoons > hide sel & #4 atoms > select /C:426 23 atoms, 21 bonds, 2 residues, 2 models selected > hide sel & #4 atoms > select /A:326 38 atoms, 40 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /A:324 38 atoms, 40 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide sel & #4 atoms > select /A:325 24 atoms, 22 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide #!3 models > select /C:266 23 atoms, 21 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /D:266 23 atoms, 21 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide #4 models > show #4 models > show #!3 models > select /D:265 29 atoms, 29 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /D:264 16 atoms, 14 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide sel & #4 atoms > select /D:183 30 atoms, 28 bonds, 2 residues, 2 models selected > select /D:190 25 atoms, 23 bonds, 2 residues, 2 models selected > select /D:187 18 atoms, 17 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /D:191 25 atoms, 24 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /B:323 20 atoms, 18 bonds, 2 residues, 2 models selected > select /A:323 20 atoms, 18 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /A:324 38 atoms, 40 bonds, 2 residues, 2 models selected > select /A:321 21 atoms, 19 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide sel & #4 atoms > select /A:320 15 atoms, 13 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /A:319 22 atoms, 20 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide sel & #4 atoms > select /A:320 15 atoms, 13 bonds, 2 residues, 2 models selected > hide sel & #4 atoms > select /A:265 35 atoms, 33 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /A:266 21 atoms, 19 bonds, 2 residues, 2 models selected > select /A:24 Nothing selected > select /A:264 17 atoms, 15 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /D:61 18 atoms, 17 bonds, 2 residues, 2 models selected > select /D:68 26 atoms, 25 bonds, 2 residues, 2 models selected > select /D:69 20 atoms, 18 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /D:70 23 atoms, 21 bonds, 2 residues, 2 models selected > show sel & #4 atoms > select /D:71 27 atoms, 25 bonds, 2 residues, 2 models selected > show sel & #4 atoms > hide #4 models > volume #2 level 0.2761 > volume #2 level 0.2852 > show #4 models > hide #!2 models > save /Users/rebaur/Documents/POSTDOC/PROJECTS/KBTBD4/CRYO- > EM/250124_KBTBD4-PP2A-A/250207_PP2A-coot.cxs > color sel gray > lighting full > lighting soft > view sel > view > ~select Nothing selected > save /Users/rebaur/Documents/POSTDOC/PROJECTS/KBTBD4/CRYO- > EM/250124_KBTBD4-PP2A-A/250207_PP2A-coot.cxs > open > /Users/rebaur/Downloads/fold_2025_02_10_17_06/fold_2025_02_10_17_06_model_0.cif Chain information for fold_2025_02_10_17_06_model_0.cif #5 --- Chain | Description A | . B | . C | . Computing secondary structure ===== Log before crash end ===== Log: Startup Messages --- note | available bundle cache has not been initialized yet UCSF ChimeraX version: 1.9 (2024-12-11) © 2016-2024 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open > /Users/rebaur/Downloads/fold_2025_02_10_17_06/fold_2025_02_10_17_06_model_0.cif Chain information for fold_2025_02_10_17_06_model_0.cif #1 --- Chain | Description A | . B | . C | . Computing secondary structure OpenGL version: 4.1 Metal - 83.1 OpenGL renderer: Apple M2 Pro OpenGL vendor: Apple Python: 3.11.4 Locale: UTF-8 Qt version: PyQt6 6.7.1, Qt 6.7.1 Qt runtime version: 6.7.3 Qt platform: cocoa Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: Mac14,9 Model Number: MPHE3SM/A Chip: Apple M2 Pro Total Number of Cores: 10 (6 performance and 4 efficiency) Memory: 16 GB System Firmware Version: 8422.141.2 OS Loader Version: 8422.141.2 Software: System Software Overview: System Version: macOS 13.6 (22G120) Kernel Version: Darwin 22.6.0 Time since boot: 5 days, 7 hours, 17 minutes Graphics/Displays: Apple M2 Pro: Chipset Model: Apple M2 Pro Type: GPU Bus: Built-In Total Number of Cores: 16 Vendor: Apple (0x106b) Metal Support: Metal 3 Displays: Color LCD: Display Type: Built-in Liquid Retina XDR Display Resolution: 3024 x 1964 Retina Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: Yes Connection Type: Internal DELL SE2723DS: Resolution: 2560 x 1440 (QHD/WQHD - Wide Quad High Definition) UI Looks like: 2560 x 1440 @ 75.00Hz Mirror: Off Online: Yes Rotation: Supported Installed Packages: alabaster: 1.0.0 anyio: 4.7.0 appdirs: 1.4.4 appnope: 0.1.4 asttokens: 3.0.0 auditwheel: 6.1.0 autocommand: 2.2.2 babel: 2.16.0 backports.tarfile: 1.2.0 beautifulsoup4: 4.12.3 blockdiag: 3.0.0 blosc2: 3.0.0 build: 1.2.1 certifi: 2023.11.17 cftime: 1.6.4.post1 charset-normalizer: 3.4.0 ChimeraX-AddCharge: 1.5.18 ChimeraX-AddH: 2.2.6 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.5 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.16.1 ChimeraX-AlphaFold: 1.0.1 ChimeraX-AltlocExplorer: 1.1.2 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.58.8 ChimeraX-AtomicLibrary: 14.1.11 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 3.0.0 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.1 ChimeraX-BuildStructure: 2.13.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.4.0 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.4 ChimeraX-ChemGroup: 2.0.1 ChimeraX-Clashes: 2.3 ChimeraX-Clipper: 0.24.0 ChimeraX-ColorActions: 1.0.5 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.6 ChimeraX-CommandLine: 1.2.5 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.9 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.4 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.3 ChimeraX-Dicom: 1.2.6 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.1.3 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.4.1 ChimeraX-Hbonds: 2.5 ChimeraX-Help: 1.3 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.3 ChimeraX-ISOLDE: 1.9 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-KVFinder: 1.2.1 ChimeraX-Label: 1.1.14 ChimeraX-ListInfo: 1.2.2 ChimeraX-Log: 1.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.1 ChimeraX-Map: 1.3 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.1.6 ChimeraX-MCopy: 1.0 ChimeraX-MDcrds: 2.7.2 ChimeraX-MedicalToolbar: 1.1 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.14.2 ChimeraX-MMTF: 2.2 ChimeraX-ModelArchive: 1.0 ChimeraX-Modeller: 1.5.18 ChimeraX-ModelPanel: 1.5 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-MutationScores: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.2 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.14 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.6 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.4 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.2 ChimeraX-PubChem: 2.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.6.2 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.3.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.2 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.5.6 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.14 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.2.0 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-SimilarStructures: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.18.1 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2.3 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.41 ChimeraX-Umap: 1.0 ChimeraX-uniprot: 2.3.1 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.4.4 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.4 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.2.2 contourpy: 1.3.1 cxservices: 1.2.3 cycler: 0.12.1 Cython: 3.0.10 debugpy: 1.8.9 decorator: 5.1.1 docutils: 0.21.2 executing: 2.1.0 filelock: 3.15.4 fonttools: 4.55.3 funcparserlib: 2.0.0a0 glfw: 2.8.0 grako: 3.16.5 h11: 0.14.0 h5py: 3.12.1 html2text: 2024.2.26 httpcore: 1.0.7 httpx: 0.28.1 idna: 3.10 ihm: 1.3 imagecodecs: 2024.6.1 imagesize: 1.4.1 importlib_metadata: 8.0.0 importlib_resources: 6.4.0 inflect: 7.3.1 ipykernel: 6.29.5 ipython: 8.26.0 ipywidgets: 8.1.5 jaraco.context: 5.3.0 jaraco.functools: 4.0.1 jaraco.text: 3.12.1 jedi: 0.19.1 Jinja2: 3.1.4 jupyter_client: 8.6.2 jupyter_core: 5.7.2 jupyterlab_widgets: 3.0.13 kiwisolver: 1.4.7 line_profiler: 4.1.3 lxml: 5.2.2 lz4: 4.3.3 MarkupSafe: 3.0.2 matplotlib: 3.9.2 matplotlib-inline: 0.1.7 more-itertools: 10.3.0 msgpack: 1.0.8 ndindex: 1.9.2 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.3 nibabel: 5.2.0 nptyping: 2.5.0 numexpr: 2.10.2 numpy: 1.26.4 openvr: 1.26.701 ordered-set: 4.1.0 packaging: 23.2 packaging: 24.1 ParmEd: 4.2.2 parso: 0.8.4 pep517: 0.13.1 pexpect: 4.9.0 pillow: 10.4.0 pip: 24.2 pkginfo: 1.11.1 platformdirs: 4.3.6 platformdirs: 4.2.2 prompt_toolkit: 3.0.48 psutil: 6.0.0 ptyprocess: 0.7.0 pure_eval: 0.2.3 py-cpuinfo: 9.0.0 pycollada: 0.8 pydicom: 2.4.4 pyelftools: 0.31 Pygments: 2.18.0 pynmrstar: 3.3.4 pynrrd: 1.0.0 PyOpenGL: 3.1.7 PyOpenGL-accelerate: 3.1.7 pyopenxr: 1.0.3401 pyparsing: 3.2.0 pyproject_hooks: 1.2.0 PyQt6-commercial: 6.7.1 PyQt6-Qt6: 6.7.3 PyQt6-WebEngine-commercial: 6.7.0 PyQt6-WebEngine-Qt6: 6.7.3 PyQt6-WebEngineSubwheel-Qt6: 6.7.3 PyQt6_sip: 13.8.0 python-dateutil: 2.9.0.post0 pytz: 2024.2 pyzmq: 26.2.0 qtconsole: 5.5.2 QtPy: 2.4.2 qtshim: 1.0 RandomWords: 0.4.0 requests: 2.32.3 scipy: 1.14.0 setuptools: 72.1.0 sfftk-rw: 0.8.1 six: 1.16.0 sniffio: 1.3.1 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.6 Sphinx: 8.0.2 sphinx-autodoc-typehints: 2.2.3 sphinxcontrib-applehelp: 2.0.0 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 2.0.0 sphinxcontrib-htmlhelp: 2.1.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 2.0.0 sphinxcontrib-serializinghtml: 2.0.0 stack-data: 0.6.3 superqt: 0.6.3 tables: 3.10.1 tcia_utils: 1.5.1 tifffile: 2024.7.24 tinyarray: 1.2.4 tomli: 2.0.1 tornado: 6.4.2 traitlets: 5.14.3 typeguard: 4.3.0 typing_extensions: 4.12.2 typing_extensions: 4.12.2 tzdata: 2024.2 urllib3: 2.2.3 wcwidth: 0.2.13 webcolors: 24.6.0 wheel: 0.43.0 wheel: 0.43.0 wheel-filename: 1.4.1 widgetsnbextension: 4.0.13 zipp: 3.19.2 }}} " defect closed normal Window Toolkit duplicate all ChimeraX