id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 16764 Crash in event loop chimerax-bug-report@… Eric Pettersen "{{{ The following bug report has been submitted: Platform: macOS-15.2-x86_64-i386-64bit ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Fatal Python error: Bus error Thread 0x0000700027392000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 579 in _handle_results File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000070002638f000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 531 in _handle_tasks File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000070002538c000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/selectors.py"", line 415 in select File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/connection.py"", line 930 in wait File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 502 in _wait_for_updates File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 522 in _handle_workers File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x0000700024389000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x0000700023386000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x0000700022383000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x0000700021380000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000070002037d000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000070001f37a000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000070001e377000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000070001d374000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000070001c371000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000070001b36e000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000070001a36b000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x0000700019368000 (most recent call first): File ""/private/var/folders/gk/xrjtzhlx1sv14gqndykws4440000gn/T/AppTranslocation/318B0109-549D-4D2E-9E77-456C7E8F9AAB/d/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File 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: ""60f8ddccefea4203d95cbeef"", ""factorPackIds"" : { }, ""deploymentId"" : 240000025 } ], ""experiments"" : [ ] } } ===== Log before crash start ===== Startup Messages --- warning | QCoreApplication::postEvent: Unexpected null receiver note | available bundle cache has not been initialized yet You can double click a model's Name or ID in the model panel to edit those fields UCSF ChimeraX version: 1.9 (2024-12-11) © 2016-2024 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > close > open 3bse Summary of feedback from opening 3bse fetched from pdb --- notes | Fetching compressed mmCIF 3bse from http://files.rcsb.org/download/3bse.cif Fetching CCD CA from https://files.wwpdb.org/pub/pdb/refdata/chem_comp/A/CA/CA.cif 3bse title: Crystal structure analysis of a 16-base-pair B-DNA [more info...] Chain information for 3bse #1 --- Chain | Description A | DNA (5'-D(*DA*DCP*DAP*DCP*DTP*DAP*DCP*DAP*DAP*DTP*DGP*DTP*DTP*DGP*DCP*DAP*DAP*DT)-3') B | DNA (5'-D(*DG*DTP*DAP*DTP*DTP*DGP*DCP*DAP*DAP*DCP*DAP*DTP*DTP*DGP*DTP*DAP*DGP*DT)-3') Non-standard residues in 3bse #1 --- CA — calcium ion Computing secondary structure > set bgColor white > hide > hide cartoons > show atoms > hide solvent > hide :Ca > nucleotides atoms > style ball Changed 867 atom styles ===== Log before crash end ===== Log: Startup Messages --- note | available bundle cache has not been initialized yet UCSF ChimeraX version: 1.9 (2024-12-11) © 2016-2024 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 ATI-6.1.13 OpenGL renderer: AMD Radeon Pro 5300M OpenGL Engine OpenGL vendor: ATI Technologies Inc. Python: 3.11.4 Locale: UTF-8 Qt version: PyQt6 6.7.1, Qt 6.7.1 Qt runtime version: 6.7.3 Qt platform: cocoa Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro16,1 Processor Name: 6-Core Intel Core i7 Processor Speed: 2.6 GHz Number of Processors: 1 Total Number of Cores: 6 L2 Cache (per Core): 256 KB L3 Cache: 12 MB Hyper-Threading Technology: Enabled Memory: 16 GB System Firmware Version: 2069.40.2.0.0 (iBridge: 22.16.12093.0.0,0) OS Loader Version: 582~2898 Software: System Software Overview: System Version: macOS 15.2 (24C101) Kernel Version: Darwin 24.2.0 Time since boot: 11 hours, 48 minutes Graphics/Displays: Intel UHD Graphics 630: Chipset Model: Intel UHD Graphics 630 Type: GPU Bus: Built-In VRAM (Dynamic, Max): 1536 MB Vendor: Intel Device ID: 0x3e9b Revision ID: 0x0000 Automatic Graphics Switching: Supported gMux Version: 5.0.0 Metal Support: Metal 3 AMD Radeon Pro 5300M: Chipset Model: AMD Radeon Pro 5300M Type: GPU Bus: PCIe PCIe Lane Width: x16 VRAM (Total): 4 GB Vendor: AMD (0x1002) Device ID: 0x7340 Revision ID: 0x0043 ROM Revision: 113-D3220E-190 VBIOS Version: 113-D32207P1-020 Option ROM Version: 113-D32207P1-020 EFI Driver Version: 01.A1.190 Automatic Graphics Switching: Supported gMux Version: 5.0.0 Metal Support: Metal 3 Displays: Color LCD: Display Type: Built-In Retina LCD Resolution: 3072 x 1920 Retina Framebuffer Depth: 24-Bit Color (ARGB8888) Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: Yes Connection Type: Internal Installed Packages: alabaster: 1.0.0 anyio: 4.7.0 appdirs: 1.4.4 appnope: 0.1.4 asttokens: 3.0.0 auditwheel: 6.1.0 babel: 2.16.0 beautifulsoup4: 4.12.3 blockdiag: 3.0.0 blosc2: 3.0.0 build: 1.2.1 certifi: 2023.11.17 cftime: 1.6.4.post1 charset-normalizer: 3.4.0 ChimeraX-AddCharge: 1.5.18 ChimeraX-AddH: 2.2.6 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.5 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.16.1 ChimeraX-AlphaFold: 1.0.1 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ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-MutationScores: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.2 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.14 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.6 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.4 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.2 ChimeraX-PubChem: 2.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.6.2 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.3.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.2 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.5.6 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.14 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.2.0 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-SimilarStructures: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.18.1 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2.3 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.41 ChimeraX-Umap: 1.0 ChimeraX-uniprot: 2.3.1 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.4.4 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.4 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.2.2 contourpy: 1.3.1 cxservices: 1.2.3 cycler: 0.12.1 Cython: 3.0.10 debugpy: 1.8.9 decorator: 5.1.1 docutils: 0.21.2 executing: 2.1.0 filelock: 3.15.4 fonttools: 4.55.3 funcparserlib: 2.0.0a0 glfw: 2.8.0 grako: 3.16.5 h11: 0.14.0 h5py: 3.12.1 html2text: 2024.2.26 httpcore: 1.0.7 httpx: 0.28.1 idna: 3.10 ihm: 1.3 imagecodecs: 2024.6.1 imagesize: 1.4.1 ipykernel: 6.29.5 ipython: 8.26.0 ipywidgets: 8.1.5 jedi: 0.19.1 Jinja2: 3.1.4 jupyter_client: 8.6.2 jupyter_core: 5.7.2 jupyterlab_widgets: 3.0.13 kiwisolver: 1.4.7 line_profiler: 4.1.3 lxml: 5.2.2 lz4: 4.3.3 MarkupSafe: 3.0.2 matplotlib: 3.9.2 matplotlib-inline: 0.1.7 msgpack: 1.0.8 ndindex: 1.9.2 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.3 nibabel: 5.2.0 nptyping: 2.5.0 numexpr: 2.10.2 numpy: 1.26.4 openvr: 1.26.701 packaging: 23.2 ParmEd: 4.2.2 parso: 0.8.4 pep517: 0.13.1 pexpect: 4.9.0 pillow: 10.4.0 pip: 24.2 pkginfo: 1.11.1 platformdirs: 4.3.6 prompt_toolkit: 3.0.48 psutil: 6.0.0 ptyprocess: 0.7.0 pure_eval: 0.2.3 py-cpuinfo: 9.0.0 pycollada: 0.8 pydicom: 2.4.4 pyelftools: 0.31 Pygments: 2.18.0 pynmrstar: 3.3.4 pynrrd: 1.0.0 PyOpenGL: 3.1.7 PyOpenGL-accelerate: 3.1.7 pyopenxr: 1.0.3401 pyparsing: 3.2.0 pyproject_hooks: 1.2.0 PyQt6-commercial: 6.7.1 PyQt6-Qt6: 6.7.3 PyQt6-WebEngine-commercial: 6.7.0 PyQt6-WebEngine-Qt6: 6.7.3 PyQt6-WebEngineSubwheel-Qt6: 6.7.3 PyQt6_sip: 13.8.0 python-dateutil: 2.9.0.post0 pytz: 2024.2 pyzmq: 26.2.0 qtconsole: 5.5.2 QtPy: 2.4.2 qtshim: 1.0 RandomWords: 0.4.0 requests: 2.32.3 scipy: 1.14.0 setuptools: 72.1.0 sfftk-rw: 0.8.1 six: 1.16.0 sniffio: 1.3.1 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.6 Sphinx: 8.0.2 sphinx-autodoc-typehints: 2.2.3 sphinxcontrib-applehelp: 2.0.0 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 2.0.0 sphinxcontrib-htmlhelp: 2.1.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 2.0.0 sphinxcontrib-serializinghtml: 2.0.0 stack-data: 0.6.3 superqt: 0.6.3 tables: 3.10.1 tcia_utils: 1.5.1 tifffile: 2024.7.24 tinyarray: 1.2.4 tornado: 6.4.2 traitlets: 5.14.3 typing_extensions: 4.12.2 tzdata: 2024.2 urllib3: 2.2.3 wcwidth: 0.2.13 webcolors: 24.6.0 wheel: 0.43.0 wheel-filename: 1.4.1 widgetsnbextension: 4.0.13 }}} " defect closed normal Core can't reproduce Tom Goddard all ChimeraX