id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 16699 Window moved between screens(?) sphulera@… Tom Goddard "{{{ The following bug report has been submitted: Platform: macOS-14.5-arm64-arm-64bit ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC) Description Last time you used ChimeraX it crashed. This is a known crash that we are unable to fix. Here is information that may help you avoid this crash. The Qt window toolkit crashed due to a display configuration change, typically when waking from sleep or when an external display is disconnected or connected. This has only been seen on Mac computers. We hope a newer version of Qt will fix it. We update ChimeraX daily builds whenever a new Qt is released. You can check here https://www.cgl.ucsf.edu/chimerax/docs/troubleshoot.html#macdisplay to see if it has been fixed in a newer ChimeraX. 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\n__TEXT 1.1G 1004 \ndyld private memory 320K 4 \nmapped file 536.8M 82 \nshared memory 3136K 22 \n=========== ======= ======= \nTOTAL 6.0G 5937 \nTOTAL, minus reserved VM space 5.9G 5937 \n"", ""legacyInfo"" : { ""threadTriggered"" : { ""name"" : ""CrBrowserMain"", ""queue"" : ""com.apple.main-thread"" } }, ""logWritingSignature"" : ""ce87754ee6e0f37f36c310b91bcfc2934b937bc2"", ""trialInfo"" : { ""rollouts"" : [ { ""rolloutId"" : ""5ffde50ce2aacd000d47a95f"", ""factorPackIds"" : { }, ""deploymentId"" : 240000454 }, { ""rolloutId"" : ""639124e81d92412bfb4880b3"", ""factorPackIds"" : { }, ""deploymentId"" : 240000012 } ], ""experiments"" : [ ] } } ===== Log before crash start ===== UCSF ChimeraX version: 1.9 (2024-12-11) © 2016-2024 Regents of the University of California. All rights reserved. > open /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession.cxs Log from Fri Jan 24 15:51:19 2025UCSF ChimeraX version: 1.9rc202412032254 (2024-12-03) © 2016-2024 Regents of the University of California. All rights reserved. > open /Users/gozorows/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/TSRI/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#1.cxs Log from Fri Jan 24 13:21:31 2025 Startup Messages --- note | available bundle cache has not been initialized yet UCSF ChimeraX version: 1.9 (2024-12-11) © 2016-2024 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb Chain information for Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1 --- Chain | Description A | No description available B | No description available C | No description available H | No description available L | No description available > open /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q12BBM-069_BG505_P455_J2029_C1_3.3.mrc Opened Q12BBM-069_BG505_P455_J2029_C1_3.3.mrc as #2, grid size 400,400,400, pixel 1.03, shown at level 0.0501, step 2, values float32 > close #2 > open /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb Chain information for Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2 --- Chain | Description A | No description available B | No description available C | No description available H | No description available L | No description available > open /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb Chain information for Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3 --- Chain | Description A | No description available B | No description available C | No description available H | No description available L | No description available > open 7T77 fromDatabase pdb format mmcif 7t77 title: HIV-1 Envelope ApexGT3.N130 in complex with PG9 Fab [more info...] Chain information for 7t77 #4 --- Chain | Description A C E | HIV Envelope ApexGT3.N130 gp120 B D F | HIV Envelope ApexGT3.N130 gp41 H | PG9 Fab Heavy Chain L | PG9 Fab Light Chain Non-standard residues in 7t77 #4 --- BMA — beta-D-mannopyranose (beta-D-mannose; D-mannose; mannose) MAN — alpha-D-mannopyranose (alpha-D-mannose; D-mannose; mannose) NAG — 2-acetamido-2-deoxy-beta-D-glucopyranose (N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE) > hide atoms > show cartoons > ui tool show Matchmaker > matchmaker #!2-4 to #1/H pairing bs Computing secondary structure [Repeated 3 time(s)] Parameters --- Chain pairing | bs Alignment algorithm | Needleman-Wunsch Similarity matrix | BLOSUM-62 SS fraction | 0.3 Gap open (HH/SS/other) | 18/18/6 Gap extend | 1 SS matrix | | | H | S | O ---|---|---|--- H | 6 | -9 | -6 S | | 6 | -6 O | | | 4 Iteration cutoff | 2 Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain H (#2), sequence alignment score = 434.3 RMSD between 115 pruned atom pairs is 0.673 angstroms; (across all 127 pairs: 1.856) Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain H (#3), sequence alignment score = 441.6 RMSD between 111 pruned atom pairs is 0.642 angstroms; (across all 127 pairs: 1.946) Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with 7t77, chain H (#4), sequence alignment score = 299.2 RMSD between 104 pruned atom pairs is 0.956 angstroms; (across all 123 pairs: 2.666) > hide #!3 models > hide #!2 models > hide #!1 models > show #!3 models > hide #!3 models > hide #!4 models > show #!3 models > show #!2 models > show #!1 models > open /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc > lighting soft > hide atoms > set bgColor #ffffff00 > graphics silhouettes true width 1.5 > camera ortho > setattr g display false Assigning display attribute to 4 items > cartoon style width 1 thickness 1 > cartoon suppressBackboneDisplay true > show cartoons > style stick Changed 65146 atom styles > color #1/L #b188a7 > color #1/H #6a64a5 > color /C tan > color #1/B #72a27e > color #1/A #a7a7a7 > color :NAG,NAM,BMA,MAN blue executed base_coloring.cxc > hide #!3 models > hide #!2 models > show #!4 models > hide #!4 models > show #!4 models > hide #!4 models > show #!4 models > hide #!1 models > show #!1 models > hide #!4 models > ui tool show Matchmaker > matchmaker #4/E to #1/B pairing ss Computing secondary structure [Repeated 1 time(s)] Parameters --- Chain pairing | ss Alignment algorithm | Needleman-Wunsch Similarity matrix | BLOSUM-62 SS fraction | 0.3 Gap open (HH/SS/other) | 18/18/6 Gap extend | 1 SS matrix | | | H | S | O ---|---|---|--- H | 6 | -9 | -6 S | | 6 | -6 O | | | 4 Iteration cutoff | 2 Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain B (#1) with 7t77, chain E (#4), sequence alignment score = 1812.7 RMSD between 395 pruned atom pairs is 0.868 angstroms; (across all 442 pairs: 1.619) > show #!4 models > matchmaker #!1-3 to #4/E pairing bs Computing secondary structure [Repeated 3 time(s)] Parameters --- Chain pairing | bs Alignment algorithm | Needleman-Wunsch Similarity matrix | BLOSUM-62 SS fraction | 0.3 Gap open (HH/SS/other) | 18/18/6 Gap extend | 1 SS matrix | | | H | S | O ---|---|---|--- H | 6 | -9 | -6 S | | 6 | -6 O | | | 4 Iteration cutoff | 2 Matchmaker 7t77, chain E (#4) with Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain C (#1), sequence alignment score = 1853.8 RMSD between 388 pruned atom pairs is 0.920 angstroms; (across all 442 pairs: 1.596) Matchmaker 7t77, chain E (#4) with Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain C (#2), sequence alignment score = 1972.2 RMSD between 396 pruned atom pairs is 0.857 angstroms; (across all 433 pairs: 1.202) Matchmaker 7t77, chain E (#4) with Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain B (#3), sequence alignment score = 1924.9 RMSD between 394 pruned atom pairs is 0.930 angstroms; (across all 425 pairs: 1.266) > matchmaker #!2-3 to #1/H pairing bs Computing secondary structure [Repeated 2 time(s)] Parameters --- Chain pairing | bs Alignment algorithm | Needleman-Wunsch Similarity matrix | BLOSUM-62 SS fraction | 0.3 Gap open (HH/SS/other) | 18/18/6 Gap extend | 1 SS matrix | | | H | S | O ---|---|---|--- H | 6 | -9 | -6 S | | 6 | -6 O | | | 4 Iteration cutoff | 2 Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb, chain H (#2), sequence alignment score = 434.3 RMSD between 115 pruned atom pairs is 0.673 angstroms; (across all 127 pairs: 1.856) Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain H (#1) with Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb, chain H (#3), sequence alignment score = 441.6 RMSD between 111 pruned atom pairs is 0.642 angstroms; (across all 127 pairs: 1.946) > matchmaker #4/E to #1/B pairing ss Computing secondary structure [Repeated 1 time(s)] Parameters --- Chain pairing | ss Alignment algorithm | Needleman-Wunsch Similarity matrix | BLOSUM-62 SS fraction | 0.3 Gap open (HH/SS/other) | 18/18/6 Gap extend | 1 SS matrix | | | H | S | O ---|---|---|--- H | 6 | -9 | -6 S | | 6 | -6 O | | | 4 Iteration cutoff | 2 Matchmaker Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb, chain B (#1) with 7t77, chain E (#4), sequence alignment score = 1812.7 RMSD between 395 pruned atom pairs is 0.868 angstroms; (across all 442 pairs: 1.619) > hide #!4 models > ui tool show ""Side View"" > select #1 /H:64,32,58,199J 25 atoms, 22 bonds, 3 residues, 1 model selected > show sel atoms > select clear > select #1 /H:64,32,58,100J 33 atoms, 29 bonds, 4 residues, 1 model selected > show sel atoms > select clear > select #1 /H 998 atoms, 1023 bonds, 127 residues, 1 model selected > hide sel atoms > select clear > select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J 68 atoms, 68 bonds, 7 residues, 1 model selected > show sel atoms > color sel byhetero > select clear > select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /L 863 atoms, 886 bonds, 110 residues, 1 model selected > select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167, > 169, 170, 171, 306, 166, 169, 173 141 atoms, 137 bonds, 15 residues, 1 model selected > show sel atoms > select clear > color #!1 byhetero > select #B :158-196 Expected an objects specifier or a keyword > select #1 /B :158-196 340 atoms, 345 bonds, 40 residues, 1 model selected > select clear > select #1 /H :31, 100B 22 atoms, 21 bonds, 2 residues, 1 model selected > select #1 /H :31, 100B #1 /C :185, 169 41 atoms, 38 bonds, 4 residues, 1 model selected > show sel atoms > select #1 /H :100B #1 /A :160, 169 35 atoms, 33 bonds, 3 residues, 1 model selected > hide sel atoms > show sel atoms > select clear > ui tool show Distances Exactly two atoms must be selected! > select #1/A:169@NH1 1 atom, 1 residue, 1 model selected > select #1/H:100B@O2 1 atom, 1 residue, 1 model selected > select #1/A:169@NH1 1 atom, 1 residue, 1 model selected > select add #1/H:100B@O2 2 atoms, 2 residues, 1 model selected > distance #1/A:169@NH1 #1/H:100B@O2 Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ARG 169 NH1 and /H TYS 100B O2: 3.318Å > select add #1/A:160@ND2 3 atoms, 3 residues, 1 model selected > select subtract #1/H:100B@O2 2 atoms, 2 residues, 1 model selected > distance #1/A:169@NH1 #1/A:160@ND2 Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ARG 169 NH1 and ASN 160 ND2: 3.304Å > ~distance #1/A:169@NH1 #1/A:160@ND2 > select clear > select #1/A:160@ND2 1 atom, 1 residue, 1 model selected > select add #1/H:100B@O2 2 atoms, 2 residues, 1 model selected > distance #1/A:160@ND2 #1/H:100B@O2 Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160 ND2 and /H TYS 100B O2: 3.314Å > select subtract #1/H:100B 1 atom, 1 residue, 1 model selected > select add #1/C:169@NH1 2 atoms, 2 residues, 1 model selected > distance #1/A:160@ND2 #1/C:169@NH1 Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160 ND2 and /C ARG 169 NH1: 14.345Å > ~distance #1/A:160@ND2 #1/C:169@NH1 > select clear > select add #1/H:100B 16 atoms, 16 bonds, 1 residue, 1 model selected > select add #1/C:169@NH1 17 atoms, 16 bonds, 2 residues, 1 model selected Exactly two atoms must be selected! > select #1 /H :100B O #1 /C :169 NH1 Expected a keyword > select #1 /H :100B O, #1 /C :169 NH1 Expected a keyword > select #1 /H :100B O Expected a keyword > select #1 /H :100B @O 1 atom, 1 residue, 1 model selected > select #1 /H :100B @O #1 /C :169 @NH1 2 atoms, 2 residues, 1 model selected > distance #1/H:100B@O #1/C:169@NH1 Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O and /C ARG 169 NH1: 2.954Å > select clear > hide #5.1 models > show #!1 atoms > hide #!1 atoms > select #1 /H :31, 100B #1 /C :185, 169 41 atoms, 38 bonds, 1 pseudobond, 4 residues, 2 models selected > show sel atoms > select up 232 atoms, 234 bonds, 1 pseudobond, 28 residues, 2 models selected > select up 4916 atoms, 5055 bonds, 1 pseudobond, 603 residues, 2 models selected > select up 4935 atoms, 5074 bonds, 1 pseudobond, 605 residues, 2 models selected > select clear > select #1 /H :100B #1 /A :160, 169 35 atoms, 33 bonds, 2 pseudobonds, 3 residues, 2 models selected > show sel atoms > select clear > select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167, > 169, 170, 171, 306, 166, 169, 173 141 atoms, 137 bonds, 15 residues, 1 model selected > show sel atoms > select clear > select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J 68 atoms, 68 bonds, 7 residues, 1 model selected > select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167, > 169, 170, 171, 306, 166, 169, 173 141 atoms, 137 bonds, 15 residues, 1 model selected > select clear > select down Nothing selected > select down Nothing selected > select #1 /C :166 11 atoms, 10 bonds, 1 residue, 1 model selected > show sel atoms > select clear > select #1 /C :166 11 atoms, 10 bonds, 1 residue, 1 model selected > select clear > select #1 /A :166 11 atoms, 10 bonds, 1 residue, 1 model selected > select #1 :166 33 atoms, 30 bonds, 3 residues, 1 model selected > show sel atoms > select clear > select #1 :160 24 atoms, 21 bonds, 3 residues, 1 model selected > select clear > select #1 :169 33 atoms, 30 bonds, 3 residues, 1 model selected > select clear > select ~sel & ##selected Nothing selected > select #1 :160 24 atoms, 21 bonds, 3 residues, 1 model selected > select clear > view clip false [Repeated 1 time(s)] > view name TYR100B > view list Named views: TYR100B > view TYR100B [Repeated 1 time(s)] Unsupported scale factor (0.000000) detected on Display0 [Repeated 1 time(s)] QPainter::begin: Paint device returned engine == 0, type: 2 QPainter::translate: Painter not active QPainter::setPen: Painter not active QPainter::setBrush: Painter not active QPainter::drawPoints: Painter not active QPainter::end: Painter not active, aborted QPainter::begin: Paint device returned engine == 0, type: 2 QPainter::translate: Painter not active QPainter::setPen: Painter not active QPainter::setBrush: Painter not active QPainter::drawPoints: Painter not active QPainter::end: Painter not active, aborted Unsupported scale factor (0.000000) detected on Display0 [Repeated 4 time(s)] > view TYR100B [Repeated 1 time(s)] > view name TYR100B > view TYR100B > save /Users/sphulera/Desktop/image46.png supersample 3 > save /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3.cxs > show #!2 models > hide #!1 models > show #!1 models > hide #!1 models > select add #2 15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected > show sel atoms > color (#!2 & sel) byhetero > select clear > show #!1 models > hide #!2 models > show #!2 models > color #2 /L #b188a7 > color #2 /H #6a64a5 > hide #!1 models > show #!1 models > hide #!2 models > show #!2 models > open /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc > lighting soft > hide atoms > set bgColor #ffffff00 > graphics silhouettes true width 1.5 > camera ortho > setattr g display false Assigning display attribute to 5 items > cartoon style width 1 thickness 1 > cartoon suppressBackboneDisplay true > show cartoons > style stick Changed 65146 atom styles > color #1/L #b188a7 > color #1/H #6a64a5 > color /C tan > color #1/B #72a27e > color #1/A #a7a7a7 > color :NAG,NAM,BMA,MAN blue executed base_coloring.cxc > hide #!2 models > show #!2 models > hide #!1 models > open /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/base_coloring.cxc > lighting soft > hide atoms > set bgColor #ffffff00 > graphics silhouettes true width 1.5 > camera ortho > setattr g display false Assigning display attribute to 5 items > cartoon style width 1 thickness 1 > cartoon suppressBackboneDisplay true > show cartoons > style stick Changed 65146 atom styles > color /L #b188a7 > color /H #6a64a5 > color /C tan > color /B #72a27e > color /A #a7a7a7 > color :NAG,NAM,BMA,MAN blue executed base_coloring.cxc > show #!1 models > show #!3 models > hide #!3 models > hide #!2 models > show #!2 models > hide #!1 models > view TYR100B > select add #2 15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected > show sel atoms > color (#!2 & sel) byelement > select clear > color :NAG, NAM, BMA blue > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > hide #!2 atoms > show #!1 models > hide #!2 models > select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167, > 169, 170, 171, 306, 166, 169, 173 141 atoms, 137 bonds, 15 residues, 1 model selected > show sel atoms > color sel byhetero > select clear > select #1 /H :53, 54, 100E, 100G, 100D, 100E, 100F, 100J #1 /B : 163, 167, > 169, 170, 171, 306, 166, 169, 173 141 atoms, 137 bonds, 15 residues, 1 model selected > select #1 /H :100B #1 /A :160, 169 35 atoms, 33 bonds, 2 pseudobonds, 3 residues, 2 models selected > show sel atoms > color (#!1 & sel) byhetero > show #!5 models > select #1 /H :31, 100B #1 /C :185, 169 41 atoms, 38 bonds, 1 pseudobond, 4 residues, 2 models selected > show sel atoms > color (#!1 & sel) byelement > select clear > color /C tan > color #!1,5 byhetero > select clear > hide #!1 models > show #!2 models > show #!1 models > hide #!1 models > show atoms #2 /H :53 Expected ',' or a keyword > show #2 /H :53 > show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56 > color /H #6a64a5 > color /H byelement #6a64a5 Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels', 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword > color /H byelement atoms #6a64a5 Expected ',' or a keyword > color byelement /H #6a64a5 Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels', 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword > color byelement /H Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels', 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword > color #!2,5 byhetero > color /H byhetero > show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56 #2 /B :163,167,169, > 170, 171, 168, 169, 171, 305 > color #2 byhetero > select clear > color #!2,5 byhetero > show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56 #2 /B :163,167,169, > 170, 171, 168, 169, 171, 305 > color #!2,5 byhetero > select add #2 15831 atoms, 16161 bonds, 20 pseudobonds, 1959 residues, 2 models selected > color (#!2 & sel) byhetero > select clear > color /L #b188a7 > color /H #6a64a5 > color /C tan > color /B #72a27e > color /A #a7a7a7 > color #!2,5 byhetero > view list Named views: TYR100B > view TYR100B > show #2 /H :53, 100I, 100K, 33, 100M, 100I, 100M, 56, 64, 100E, 100L, 58 #2 > /B :163,167,169, 170, 171, 168, 169, 171, 305, 322, 305 > distance #2 /H :100E @OD1 #2 /B :169 Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or one or more measurable objects and one or more atoms, got 10 atoms and 0 measurable objects > distance #2 /H :100E @OD1 #2 /B :169 @NZ Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD1 and /B LYS 169 NZ: 4.244Å > distance #2 /H :100E @OD1 #2 /B :171 @NZ Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD1 and /B LYS 171 NZ: 18.040Å > ~distance #2/H:100E@OD1 #2/B:169@NZ > distance #2 /H :100L @OD1 #2 /B :171 @NZ Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100L OD1 and /B LYS 171 NZ: 3.182Å > ~distance #2/H:100L@OD1 #2/B:171@NZ > ~distance #2/H:100E@OD1 #2/B:171@NZ > distance #2 /H :100L @OD1 #2 /B :171 @NZ Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100L OD1 and /B LYS 171 NZ: 3.182Å > distance #2 /H :100E @OD2 #2 /B :169 @NZ Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD2 and /B LYS 169 NZ: 3.026Å > distance #2 /H :58E @OD1 #2 /B :305 @NZ Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or one or more measurable objects and one or more atoms, got 1 atoms and 0 measurable objects > distance #2 /H :58 @OD1 #2 /B :305 @NZ Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 58 OD1 and /B LYS 305 NZ: 3.766Å > ~distance #1/H:100B@O #1/C:169@NH1 > distance #2 /H :58 @OD1 #2 /B :305 @NZ Distance already exists; modify distance properties with 'distance style' > distance #2 /H :100C @OE1 #2 /A :169 @NZ Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100C OE1 and /A LYS 169 NZ: 3.024Å > show #2 /H :100C #2 /A :169 > show #2 /H :100C #2 /A :169 > select clear > select :169 120 atoms, 108 bonds, 12 residues, 4 models selected > show sel & #!2 atoms > select clear > select :160 96 atoms, 84 bonds, 12 residues, 4 models selected > list view Unknown command: list view > view list Named views: TYR100B > view TYR100B > select clear > save /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#2.cxs > save /Users/sphulera/Desktop/image47.png supersample 3 > show #!1 models > hide #!2 models > color #!1,5 byhetero > save /Users/sphulera/Library/CloudStorage/OneDrive- > TheScrippsResearchInstitute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/comparison_cdrh3#1.cxs ——— End of log from Fri Jan 24 13:21:31 2025 ——— opened ChimeraX session > ui tool show ""Side View"" > show #!2 models > hide #!1 models > ui tool show H-Bonds > hbonds reveal true 12911 hydrogen bonds found > hbonds intraModel false intraRes false reveal true 6753 hydrogen bonds found > select #2:MAN:NAG:BMA:FUC 971 atoms, 994 bonds, 73 residues, 1 model selected > color sel lime > color sel yellow > select clear > hide #!2 models > show #!1 models > select #1:MAN:NAG:BMA:FUC 1137 atoms, 1169 bonds, 84 residues, 1 model selected > show sel atoms > color sel yellow > select #1/L:53 6 atoms, 5 bonds, 1 residue, 1 model selected > select #1/B:160 8 atoms, 7 bonds, 1 residue, 1 model selected > show sel atoms > select clear > select #1/C:160 8 atoms, 7 bonds, 1 residue, 1 model selected > show sel atoms > show #!3 models > hide #!1 models > select #3:MAN:NAG:BMA:FUC 877 atoms, 899 bonds, 65 residues, 1 model selected > show sel atoms > color sel yellow > style sel sphere Changed 877 atom styles > select clear > select #3 &~ #3:MAN:NAG:BMA:FUC 14917 atoms, 15255 bonds, 19 pseudobonds, 1896 residues, 2 models selected > hide sel atoms > select clear > save ""/Users/gozorows/OneDrive - The Scripps Research > Institute/TSRI/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession.cxs"" ——— End of log from Fri Jan 24 15:51:19 2025 ——— opened ChimeraX session > show #!4 models > hide #!3 models > show #!3 models > hide #!3 models > show #!3 models > hide #!3 models > select :NAG, NAM, BMA 4074 atoms, 4169 bonds, 439 pseudobonds, 297 residues, 5 models selected > style sel & #!4 sphere Changed 1320 atom styles > select :NAG, NAM, BMA, MAN 4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected > select :NAG, NAM, BMA, MAN 4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected > style sel & #!4 sphere Changed 1419 atom styles > select clear > select :NAG, NAM, BMA, MAN 4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected > color (#!4 & sel) yellow > select clear > show #!3 models > hide #!4 models > select /H,L 7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected > hide sel & #!3 atoms > show #!4 models > select /H,L 7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected > hide sel & #!3-4 atoms > select clear > hide #!5 models > hide #6 models > hide #!3 models > select :NAG, NAM, BMA, MAN 4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected > ui tool show H-Bonds > hbonds sel interModel false distSlop 2.0 intraMol false intraRes false > reveal true log true Finding intramodel H-bonds Constraints relaxed by 2 angstroms and 20 degrees Models used: 1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb 2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb 3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb 4 7t77 273 H-bonds H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist): Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 135 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no hydrogen 3.432 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 135 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no hydrogen 2.973 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 136 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O7 no hydrogen 4.422 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 155 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 720 O5 no hydrogen 4.201 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 702 O6 no hydrogen 3.176 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 208 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A MAN 736 O6 no hydrogen 3.284 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 235 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O5 no hydrogen 4.248 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 251 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O5 no hydrogen 4.381 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 294 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 O7 no hydrogen 4.181 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 307 NH1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 no hydrogen 4.612 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 307 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 no hydrogen 4.800 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 331 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O7 no hydrogen 4.787 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 362 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O4 no hydrogen 5.247 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A GLY 378 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O3 no hydrogen 4.757 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 387 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O5 no hydrogen 4.667 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 387 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O4 no hydrogen 4.738 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 412 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O7 no hydrogen 4.280 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 414 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 O5 no hydrogen 4.656 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 443 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 717 O5 no hydrogen 2.930 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O3 no hydrogen 4.457 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O4 no hydrogen 5.614 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O5 no hydrogen 5.557 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A CYS 444 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O6 no hydrogen 5.053 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A VAL 445 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O4 no hydrogen 4.483 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A VAL 445 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 734 O7 no hydrogen 3.947 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 612 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 741 O6 no hydrogen 3.240 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 702 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 160 OD1 no hydrogen 4.772 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 719 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A HIS 329 NE2 no hydrogen 3.156 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 726 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 740 O7 no hydrogen 3.585 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASP 321 OD1 no hydrogen 5.115 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 728 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASP 321 OD2 no hydrogen 4.393 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A THR 235 O no hydrogen 4.514 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 732 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A PRO 237 O no hydrogen 5.107 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 446 OG no hydrogen 3.566 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 733 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A GLU 210 OE2 no hydrogen 3.983 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A MAN 736 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 208 OG no hydrogen 3.284 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 363 O no hydrogen 3.898 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O7 no hydrogen 4.530 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 739 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 738 O7 no hydrogen 4.653 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A NAG 741 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A SER 612 OG no hydrogen 3.240 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O7 no hydrogen 4.081 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 151 NE Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O7 no hydrogen 4.097 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 151 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O7 no hydrogen 4.741 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B TYR 173 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 no hydrogen 4.764 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 189 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 721 O3 no hydrogen 4.564 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 234 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 N2 no hydrogen 4.440 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 236 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 O5 no hydrogen 4.564 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 295 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no hydrogen 4.211 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ILE 323 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 no hydrogen 3.934 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 332 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O7 no hydrogen 4.451 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 388 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O6 no hydrogen 3.244 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O7 no hydrogen 4.058 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O5 no hydrogen 4.964 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 415 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O5 no hydrogen 4.375 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NE Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no hydrogen 4.034 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O5 no hydrogen 4.253 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 O5 no hydrogen 2.957 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 O7 no hydrogen 3.647 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O3 no hydrogen 3.751 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O5 no hydrogen 4.891 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B CYS 445 SG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O6 no hydrogen 4.186 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B VAL 446 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O4 no hydrogen 4.465 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B VAL 446 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O7 no hydrogen 4.864 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH no hydrogen 4.060 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 197 O no hydrogen 5.021 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 197 OD1 no hydrogen 4.555 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 718 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 293 OE1 no hydrogen 3.241 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 720 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B HIS 330 NE2 no hydrogen 3.205 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 721 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLY 152 O no hydrogen 4.951 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 262 OD1 no hydrogen 3.220 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 448 OD1 no hydrogen 4.270 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 728 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O5 no hydrogen 4.061 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 O no hydrogen 3.666 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 135 O no hydrogen 3.559 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B TYR 173 OH no hydrogen 4.764 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLY 321 O no hydrogen 4.744 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 729 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ILE 323 O no hydrogen 4.949 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 OD1 no hydrogen 3.271 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 744 O3 no hydrogen 4.646 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG no hydrogen 2.808 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 OD1 no hydrogen 3.166 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 O no hydrogen 3.729 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 735 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 236 O no hydrogen 4.343 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 377 O no hydrogen 4.977 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 736 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLU 211 OE2 no hydrogen 4.991 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 737 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 444 O no hydrogen 5.042 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B BMA 738 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLU 211 OE1 no hydrogen 5.142 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O7 no hydrogen 3.107 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 no hydrogen 3.587 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 388 OG no hydrogen 3.244 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 no hydrogen 4.497 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 741 O3 no hydrogen 3.587 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O5 no hydrogen 4.659 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O6 no hydrogen 4.497 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 743 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 742 O5 no hydrogen 4.243 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 744 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O3 no hydrogen 4.646 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B BMA 746 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 748 O5 no hydrogen 4.487 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 747 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 46 OE1 no hydrogen 5.126 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 130 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O7 no hydrogen 4.559 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 158 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O6 no hydrogen 4.213 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 198 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O5 no hydrogen 4.689 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C LYS 252 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O5 no hydrogen 4.833 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 279 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 738 O5 no hydrogen 3.820 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 295 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O7 no hydrogen 4.723 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 332 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O7 no hydrogen 4.455 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 363 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 O4 no hydrogen 4.375 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLY 379 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3 no hydrogen 4.978 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O7 no hydrogen 4.765 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 741 O5 no hydrogen 3.388 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O7 no hydrogen 4.399 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 413 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O5 no hydrogen 5.001 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 415 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O6 no hydrogen 4.524 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ARG 444 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 O6 no hydrogen 2.905 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C VAL 446 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O4 no hydrogen 4.178 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 160 OD1 no hydrogen 4.753 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE1 no hydrogen 3.271 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.183 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 197 O no hydrogen 4.730 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 704 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 197 OD1 no hydrogen 4.557 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 718 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 293 OE1 no hydrogen 3.282 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 720 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 415 OG1 no hydrogen 4.524 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6 no hydrogen 4.963 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 729 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 88 OD1 no hydrogen 2.881 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASP 322 OD2 no hydrogen 4.764 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 743 O5 no hydrogen 2.989 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 743 O7 no hydrogen 2.443 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 730 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 158 OG no hydrogen 4.213 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.370 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no hydrogen 3.602 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no hydrogen 2.872 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 4.462 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2 no hydrogen 4.039 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O5 no hydrogen 4.666 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O6 no hydrogen 4.352 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 3.794 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no hydrogen 2.884 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 732 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 no hydrogen 4.039 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 4.323 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 2.931 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 2.870 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ILE 97 O no hydrogen 3.751 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 101 OD2 no hydrogen 4.400 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 4.837 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 no hydrogen 4.352 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 734 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C THR 236 OG1 no hydrogen 4.864 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE2 no hydrogen 3.916 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 377 O no hydrogen 4.413 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE1 no hydrogen 4.145 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 735 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLU 211 OE2 no hydrogen 4.790 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 736 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ARG 444 O no hydrogen 4.469 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 388 OG no hydrogen 4.447 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 740 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C SER 364 O no hydrogen 3.722 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O3 no hydrogen 4.963 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C BMA 742 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 727 O7 no hydrogen 5.150 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2 no hydrogen 4.370 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H VAL 2 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 no hydrogen 4.774 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 3.307 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no hydrogen 4.462 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 no hydrogen 4.060 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O5 no hydrogen 4.887 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 no hydrogen 3.632 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 no hydrogen 4.886 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O6 no hydrogen 3.786 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O4 no hydrogen 3.574 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O5 no hydrogen 4.918 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 4.514 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 52 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O6 no hydrogen 4.679 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 no hydrogen 3.017 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O5 no hydrogen 4.351 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 N2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C ASP 167 OD2 no hydrogen 4.725 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no hydrogen 4.914 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE2 no hydrogen 4.749 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ASP 167 OD2 no hydrogen 4.751 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH no hydrogen 3.531 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 OD1 no hydrogen 2.873 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 4.807 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG no hydrogen 4.535 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 3.926 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 O no hydrogen 5.053 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 2.904 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 N2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 4.624 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH no hydrogen 4.667 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.659 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 5.152 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.734 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 2.874 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 62 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O6 no hydrogen 4.891 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 98 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 no hydrogen 4.263 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O5 no hydrogen 4.369 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 no hydrogen 4.788 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 O4 no hydrogen 3.821 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 no hydrogen 4.667 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 no hydrogen 3.531 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 no hydrogen 3.011 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O5 no hydrogen 4.876 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 no hydrogen 4.807 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 no hydrogen 3.926 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 31 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 4.157 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O4 no hydrogen 3.878 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O7 no hydrogen 4.344 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 no hydrogen 4.535 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.745 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O4 no hydrogen 2.941 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.593 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 67 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 3.874 N/A 7t77 #4/E ARG 308 NH1 7t77 #4/S NAG 1 O7 no hydrogen 2.971 N/A 7t77 #4/E ARG 308 NH2 7t77 #4/S NAG 1 O7 no hydrogen 3.095 N/A 7t77 #4/H SER 74 N 7t77 #4/j MAN 5 O6 no hydrogen 3.135 N/A 7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O4 no hydrogen 4.355 N/A 7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O6 no hydrogen 3.762 N/A 7t77 #4/H ARG 100B NE 7t77 #4/h NAG 1 O6 no hydrogen 2.959 N/A 7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O5 no hydrogen 3.418 N/A 7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O6 no hydrogen 2.953 N/A 7t77 #4/H ASN 100F ND2 7t77 #4/X NAG 1 O7 no hydrogen 5.183 N/A 7t77 #4/H TYR 100K OH 7t77 #4/j NAG 1 O4 no hydrogen 4.788 N/A 7t77 #4/H TYR 100K OH 7t77 #4/j NAG 2 O3 no hydrogen 4.518 N/A 7t77 #4/H ASN 100P N 7t77 #4/h MAN 5 O3 no hydrogen 4.984 N/A 7t77 #4/H ASN 100P ND2 7t77 #4/h MAN 5 O4 no hydrogen 2.860 N/A 7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O3 no hydrogen 3.359 N/A 7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O4 no hydrogen 3.351 N/A 7t77 #4/H HIS 100R NE2 7t77 #4/h MAN 5 O4 no hydrogen 3.440 N/A 7t77 #4/L SER 32 OG 7t77 #4/h MAN 6 O3 no hydrogen 2.926 N/A 7t77 #4/L SER 56 N 7t77 #4/X BMA 3 O3 no hydrogen 5.008 N/A 7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O2 no hydrogen 4.789 N/A 7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O3 no hydrogen 3.927 N/A 7t77 #4/X BMA 3 O2 7t77 #4/L SER 56 OG no hydrogen 4.789 N/A 7t77 #4/X BMA 3 O3 7t77 #4/L SER 56 OG no hydrogen 3.927 N/A 7t77 #4/X BMA 3 O4 7t77 #4/L SER 56 OG no hydrogen 4.978 N/A 7t77 #4/h NAG 1 O6 7t77 #4/H ASP 100 OD2 no hydrogen 4.044 N/A 7t77 #4/h NAG 1 O6 7t77 #4/H TYS 100G O2 no hydrogen 4.935 N/A 7t77 #4/h NAG 2 N2 7t77 #4/H ASP 100 OD2 no hydrogen 4.837 N/A 7t77 #4/h MAN 4 O2 7t77 #4/L SER 32 OG no hydrogen 3.818 N/A 7t77 #4/h MAN 5 O4 7t77 #4/H HIS 100R NE2 no hydrogen 3.440 N/A 7t77 #4/h MAN 6 O2 7t77 #4/L GLU 31 O no hydrogen 4.821 N/A 7t77 #4/h MAN 6 O3 7t77 #4/H TYR 100Q O no hydrogen 4.294 N/A 7t77 #4/h MAN 6 O3 7t77 #4/H HIS 100R ND1 no hydrogen 3.359 N/A 7t77 #4/h MAN 6 O3 7t77 #4/L SER 32 OG no hydrogen 2.926 N/A 7t77 #4/h MAN 6 O3 7t77 #4/L ASP 50 OD2 no hydrogen 3.718 N/A 7t77 #4/h MAN 6 O4 7t77 #4/H ASN 100P O no hydrogen 3.545 N/A 7t77 #4/h MAN 6 O4 7t77 #4/H TYR 100Q O no hydrogen 2.714 N/A 7t77 #4/h MAN 6 O4 7t77 #4/H HIS 100R ND1 no hydrogen 3.351 N/A 7t77 #4/h MAN 6 O6 7t77 #4/H TYR 100Q O no hydrogen 4.679 N/A 7t77 #4/h MAN 6 O6 7t77 #4/L ASP 50 OD1 no hydrogen 3.389 N/A 7t77 #4/j NAG 2 N2 7t77 #4/H TYR 100K OH no hydrogen 2.783 N/A 7t77 #4/j NAG 2 O3 7t77 #4/H TYR 100K OH no hydrogen 4.518 N/A 7t77 #4/j BMA 3 O2 7t77 #4/H GLY 54 O no hydrogen 4.057 N/A 7t77 #4/j MAN 5 O2 7t77 #4/H ARG 71 O no hydrogen 5.083 N/A 7t77 #4/j MAN 5 O4 7t77 #4/H ASP 72 OD1 no hydrogen 3.091 N/A 7t77 #4/j MAN 5 O4 7t77 #4/H SER 74 OG no hydrogen 4.355 N/A 7t77 #4/j MAN 5 O6 7t77 #4/H ASP 72 OD1 no hydrogen 2.858 N/A 7t77 #4/j MAN 5 O6 7t77 #4/H SER 74 OG no hydrogen 3.762 N/A 273 hydrogen bonds found > select clear > select /H,L 7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected > color (#!4 & sel) byhetero > select clear > hide #!4 models > show #!4 models > show #!3 models > hide #!4 models > show #!1 models > hide #!3 models > select /H,L 7361 atoms, 7548 bonds, 1110 pseudobonds, 950 residues, 5 models selected > hide sel & #!1 atoms > hbonds sel interModel false distSlop 2.0 intraMol false intraRes false > reveal true log true Finding intramodel H-bonds Constraints relaxed by 2 angstroms and 20 degrees Models used: 1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb 2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb 3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb 4 7t77 305 H-bonds H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist): Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O2 no hydrogen 3.314 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 158 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 3.190 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 no hydrogen 3.671 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE2 no hydrogen 5.106 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 O no hydrogen 4.793 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 32 OD1 no hydrogen 2.314 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE1 no hydrogen 4.195 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E O no hydrogen 2.894 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG no hydrogen 4.810 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 NE Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100F OH no hydrogen 3.847 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD1 no hydrogen 2.460 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 3.284 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 2.527 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD2 no hydrogen 3.110 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 4.536 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG no hydrogen 4.524 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 189 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 O no hydrogen 3.911 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H THR 57 O no hydrogen 4.539 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 58 OD1 no hydrogen 2.564 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ARG 169 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100D OH no hydrogen 3.779 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 4.851 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 4.640 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 5.017 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 2.524 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 33 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 170 OE1 no hydrogen 3.642 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no hydrogen 2.564 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no hydrogen 3.729 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no hydrogen 4.588 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no hydrogen 4.208 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 50 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 O no hydrogen 2.427 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.676 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.726 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.671 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASN 56 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 306 O no hydrogen 3.199 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LYS 64 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ILE 323 O no hydrogen 4.809 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.005 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.854 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 2.874 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 100H N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 4.086 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.866 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no hydrogen 2.822 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 OE1 no hydrogen 5.022 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no hydrogen 3.808 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no hydrogen 3.201 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no hydrogen 4.990 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no hydrogen 4.790 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no hydrogen 2.623 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no hydrogen 3.107 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no hydrogen 3.957 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ASN 160 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100C OE2 no hydrogen 3.415 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A ARG 166 NH2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD2 no hydrogen 5.159 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/A LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100C OE1 no hydrogen 3.024 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 132 OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 O no hydrogen 4.886 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 27 OE1 no hydrogen 4.014 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 158 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 O no hydrogen 2.820 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 158 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 OD1 no hydrogen 2.681 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ARG 166 NH1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD1 no hydrogen 5.030 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 168 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1 no hydrogen 3.856 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I O no hydrogen 2.892 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD1 no hydrogen 4.244 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100E OD2 no hydrogen 3.026 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 100K OD1 no hydrogen 3.962 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100L OD1 no hydrogen 3.182 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L HIS 91 O no hydrogen 3.814 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 OD1 no hydrogen 3.567 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 OD2 no hydrogen 2.769 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 189 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 28 OD2 no hydrogen 4.683 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG no hydrogen 3.788 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 58 OD1 no hydrogen 3.766 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 305 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 58 OD2 no hydrogen 3.424 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG no hydrogen 4.653 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH no hydrogen 4.060 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 OD1 no hydrogen 3.271 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG no hydrogen 2.808 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 O no hydrogen 3.729 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 747 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 46 OE1 no hydrogen 5.126 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 185 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 30 OD1 no hydrogen 4.053 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE1 no hydrogen 3.271 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.183 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 N2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLU 100A OE2 no hydrogen 4.370 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 4.462 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O6 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH no hydrogen 3.794 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 4.323 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD1 no hydrogen 2.931 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 2.870 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ILE 97 O no hydrogen 3.751 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 101 OD2 no hydrogen 4.400 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 56 OD2 no hydrogen 4.837 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H VAL 2 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 no hydrogen 4.774 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 28 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C ASN 185 O no hydrogen 2.901 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 30 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C GLN 183 O no hydrogen 4.839 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 33 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 O no hydrogen 4.901 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 33 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 170 OE1 no hydrogen 3.825 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLN 39 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 38 OE1 no hydrogen 3.146 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H LEU 45 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 99 O no hydrogen 5.079 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TRP 47 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LEU 96 O no hydrogen 4.378 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 54 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 O no hydrogen 4.552 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H SER 56 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B SER 306 O no hydrogen 4.688 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 3.307 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100G OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 731 O4 no hydrogen 4.462 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100H OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O6 no hydrogen 4.060 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 O no hydrogen 2.914 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 O no hydrogen 3.475 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H THR 100I OG1 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASP 167 OD1 no hydrogen 4.704 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASN 100K N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 169 O no hydrogen 3.356 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100M OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B LYS 171 O no hydrogen 2.952 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100N OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 55 OE1 no hydrogen 3.280 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100O N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 36 OH no hydrogen 3.309 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B THR 135 O no hydrogen 3.869 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O5 no hydrogen 4.887 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASP 1 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 no hydrogen 3.632 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 27 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 133 O no hydrogen 3.797 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 30 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 OE1 no hydrogen 3.494 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 no hydrogen 4.886 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 31 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O6 no hydrogen 3.786 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 36 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100O O no hydrogen 4.364 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 38 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H GLN 39 OE1 no hydrogen 2.945 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O4 no hydrogen 3.574 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O5 no hydrogen 4.918 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O7 no hydrogen 4.514 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100 OH no hydrogen 3.152 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L LYS 50 NZ Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H ASP 100L OD2 no hydrogen 3.175 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 52 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O6 no hydrogen 4.679 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLY 66 N Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 734 O4 no hydrogen 3.017 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B ASN 188 OD1 no hydrogen 4.535 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L SER 67 OG Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O5 no hydrogen 4.351 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L GLN 89 NE2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/H TYR 100M O no hydrogen 3.284 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 O no hydrogen 4.044 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L ASN 92 ND2 Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 OE1 no hydrogen 4.779 N/A Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/L TYR 93 OH Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B GLN 130 O no hydrogen 3.603 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ASN 160 ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no hydrogen 3.857 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ARG 166 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.507 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A ARG 166 NH2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.105 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100B OD2 no hydrogen 3.534 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE1 no hydrogen 4.914 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/A NAG 703 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100C OE2 no hydrogen 4.749 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 132 OG1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L HIS 27 ND1 no hydrogen 4.383 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 158 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 O no hydrogen 2.863 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 158 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 OD1 no hydrogen 2.785 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 163 OG1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 33 OH no hydrogen 4.833 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NE Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no hydrogen 4.268 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NE Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.794 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 166 NH2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no hydrogen 3.790 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 168 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 no hydrogen 4.296 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I O no hydrogen 2.830 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 no hydrogen 4.794 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD2 no hydrogen 4.838 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K OD1 no hydrogen 2.984 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100L OD1 no hydrogen 2.681 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 OD1 no hydrogen 4.315 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 305 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 58 OD1 no hydrogen 3.334 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 305 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 58 OD2 no hydrogen 3.096 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG no hydrogen 3.385 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLY 55 O no hydrogen 4.656 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH no hydrogen 3.531 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 OD1 no hydrogen 2.873 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 4.807 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG no hydrogen 4.535 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG no hydrogen 3.926 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 O no hydrogen 5.053 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H PHE 100D O no hydrogen 3.085 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C LYS 169 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 100E OD1 no hydrogen 4.674 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C ASN 185 ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 28 OG no hydrogen 4.042 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 2.904 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 N2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLU 100A OE2 no hydrogen 4.624 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH no hydrogen 4.667 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O3 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.659 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 5.152 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 56 OD2 no hydrogen 3.734 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O6 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ILE 97 O no hydrogen 2.874 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TRP 47 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 96 O no hydrogen 4.180 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 50 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 4.991 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 50 NH2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 4.641 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ARG 304 O no hydrogen 4.756 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 56 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B SER 306 O no hydrogen 3.497 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H SER 62 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O6 no hydrogen 4.891 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ARG 98 NH1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 no hydrogen 4.263 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O5 no hydrogen 4.369 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 703 O6 no hydrogen 4.788 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 O4 no hydrogen 3.821 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100G OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C BMA 732 O2 no hydrogen 4.667 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100H OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 no hydrogen 3.531 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ASP 167 O no hydrogen 2.790 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H THR 100I OG1 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B ASP 167 O no hydrogen 2.812 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 169 O no hydrogen 3.763 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 100K ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 4.567 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100M OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B LYS 171 O no hydrogen 3.042 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L TYR 36 OH no hydrogen 2.952 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLN 89 OE1 no hydrogen 4.726 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B THR 135 OG1 no hydrogen 4.920 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 no hydrogen 3.011 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASP 1 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 730 O5 no hydrogen 4.876 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B GLN 130 OE1 no hydrogen 3.060 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O6 no hydrogen 4.807 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 30 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 no hydrogen 3.926 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 31 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 4.157 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L TYR 36 OH Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100O O no hydrogen 4.223 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLN 38 NE2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H GLN 39 OE1 no hydrogen 2.438 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 46 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASP 101 O no hydrogen 4.804 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O4 no hydrogen 3.878 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O7 no hydrogen 4.344 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LYS 50 NZ Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H TYR 100N OH no hydrogen 5.013 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B BMA 732 O4 no hydrogen 4.535 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 52 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.745 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O4 no hydrogen 2.941 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L GLY 66 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O6 no hydrogen 4.593 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L SER 67 OG Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O5 no hydrogen 3.874 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L ASN 92 ND2 Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B GLN 130 OE1 no hydrogen 3.855 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L LEU 96 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H ASN 60 OD1 no hydrogen 4.570 N/A Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/L PHE 98 N Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/H LEU 45 O no hydrogen 4.749 N/A 7t77 #4/A ASN 167 ND2 7t77 #4/H TYS 100G O1 no hydrogen 3.008 N/A 7t77 #4/A ARG 169 NH2 7t77 #4/H ASN 100C O no hydrogen 4.895 N/A 7t77 #4/C ARG 169 NH1 7t77 #4/H GLY 100D O no hydrogen 2.960 N/A 7t77 #4/C ARG 186 NH1 7t77 #4/H TYR 100N OH no hydrogen 4.377 N/A 7t77 #4/E LYS 168 NZ 7t77 #4/H TYS 100H O3 no hydrogen 3.135 N/A 7t77 #4/E ARG 169 N 7t77 #4/H ASN 100F O no hydrogen 3.121 N/A 7t77 #4/E LYS 171 N 7t77 #4/H ASP 100I O no hydrogen 4.240 N/A 7t77 #4/E LYS 171 NZ 7t77 #4/H ASP 100I OD1 no hydrogen 2.977 N/A 7t77 #4/E ARG 172 NH1 7t77 #4/H ASP 100L OD1 no hydrogen 3.106 N/A 7t77 #4/E ARG 172 NH2 7t77 #4/H ASP 100L OD1 no hydrogen 3.187 N/A 7t77 #4/E ARG 172 NH2 7t77 #4/H ASP 100L OD2 no hydrogen 4.092 N/A 7t77 #4/E TYR 173 OH 7t77 #4/H TYR 100K OH no hydrogen 3.176 N/A 7t77 #4/H ARG 31 NH1 7t77 #4/C ASP 185 OD2 no hydrogen 5.057 N/A 7t77 #4/H GLN 39 NE2 7t77 #4/L GLN 38 OE1 no hydrogen 2.971 N/A 7t77 #4/H SER 74 N 7t77 #4/j MAN 5 O6 no hydrogen 3.135 N/A 7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O4 no hydrogen 4.355 N/A 7t77 #4/H SER 74 OG 7t77 #4/j MAN 5 O6 no hydrogen 3.762 N/A 7t77 #4/H ARG 100B NE 7t77 #4/h NAG 1 O6 no hydrogen 2.959 N/A 7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O5 no hydrogen 3.418 N/A 7t77 #4/H ARG 100B NH2 7t77 #4/h NAG 1 O6 no hydrogen 2.953 N/A 7t77 #4/H ASN 100F N 7t77 #4/E ASN 167 O no hydrogen 3.325 N/A 7t77 #4/H ASN 100F ND2 7t77 #4/X NAG 1 O7 no hydrogen 5.183 N/A 7t77 #4/H TYS 100H N 7t77 #4/E ARG 169 O no hydrogen 2.976 N/A 7t77 #4/H TYR 100K N 7t77 #4/E LYS 171 O no hydrogen 4.380 N/A 7t77 #4/H TYR 100K OH 7t77 #4/E TYR 173 OH no hydrogen 3.176 N/A 7t77 #4/H TYR 100K OH 7t77 #4/j NAG 1 O4 no hydrogen 4.788 N/A 7t77 #4/H TYR 100K OH 7t77 #4/j NAG 2 O3 no hydrogen 4.518 N/A 7t77 #4/H ASN 100P N 7t77 #4/h MAN 5 O3 no hydrogen 4.984 N/A 7t77 #4/H ASN 100P ND2 7t77 #4/h MAN 5 O4 no hydrogen 2.860 N/A 7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O3 no hydrogen 3.359 N/A 7t77 #4/H HIS 100R ND1 7t77 #4/h MAN 6 O4 no hydrogen 3.351 N/A 7t77 #4/H HIS 100R NE2 7t77 #4/h MAN 5 O4 no hydrogen 3.440 N/A 7t77 #4/H MET 100T N 7t77 #4/L TYR 36 OH no hydrogen 2.800 N/A 7t77 #4/L GLN 1 N 7t77 #4/H ASP 61 OD2 no hydrogen 2.863 N/A 7t77 #4/L SER 32 OG 7t77 #4/H HIS 100R ND1 no hydrogen 4.017 N/A 7t77 #4/L SER 32 OG 7t77 #4/h MAN 6 O3 no hydrogen 2.926 N/A 7t77 #4/L SER 34 OG 7t77 #4/H HIS 100R O no hydrogen 4.978 N/A 7t77 #4/L TYR 36 OH 7t77 #4/H MET 100T O no hydrogen 3.815 N/A 7t77 #4/L GLN 38 NE2 7t77 #4/H GLN 39 OE1 no hydrogen 2.918 N/A 7t77 #4/L SER 56 N 7t77 #4/X BMA 3 O3 no hydrogen 5.008 N/A 7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O2 no hydrogen 4.789 N/A 7t77 #4/L SER 56 OG 7t77 #4/X BMA 3 O3 no hydrogen 3.927 N/A 7t77 #4/L TYR 87 OH 7t77 #4/H GLN 43 O no hydrogen 4.064 N/A 7t77 #4/L ARG 95 NH1 7t77 #4/H GLU 56 OE1 no hydrogen 3.124 N/A 7t77 #4/L ARG 95A NE 7t77 #4/H HIS 59 O no hydrogen 3.472 N/A 7t77 #4/L ARG 96 NE 7t77 #4/H GLU 95 OE2 no hydrogen 3.747 N/A 7t77 #4/L ARG 96 NH2 7t77 #4/H GLU 95 OE2 no hydrogen 2.855 N/A 7t77 #4/X BMA 3 O2 7t77 #4/L SER 56 OG no hydrogen 4.789 N/A 7t77 #4/X BMA 3 O3 7t77 #4/L SER 56 OG no hydrogen 3.927 N/A 7t77 #4/X BMA 3 O4 7t77 #4/L SER 56 OG no hydrogen 4.978 N/A 7t77 #4/h NAG 1 O6 7t77 #4/H ASP 100 OD2 no hydrogen 4.044 N/A 7t77 #4/h NAG 1 O6 7t77 #4/H TYS 100G O2 no hydrogen 4.935 N/A 7t77 #4/h NAG 2 N2 7t77 #4/H ASP 100 OD2 no hydrogen 4.837 N/A 7t77 #4/h MAN 4 O2 7t77 #4/L SER 32 OG no hydrogen 3.818 N/A 7t77 #4/h MAN 5 O4 7t77 #4/H HIS 100R NE2 no hydrogen 3.440 N/A 7t77 #4/h MAN 6 O2 7t77 #4/L GLU 31 O no hydrogen 4.821 N/A 7t77 #4/h MAN 6 O3 7t77 #4/H TYR 100Q O no hydrogen 4.294 N/A 7t77 #4/h MAN 6 O3 7t77 #4/H HIS 100R ND1 no hydrogen 3.359 N/A 7t77 #4/h MAN 6 O3 7t77 #4/L SER 32 OG no hydrogen 2.926 N/A 7t77 #4/h MAN 6 O3 7t77 #4/L ASP 50 OD2 no hydrogen 3.718 N/A 7t77 #4/h MAN 6 O4 7t77 #4/H ASN 100P O no hydrogen 3.545 N/A 7t77 #4/h MAN 6 O4 7t77 #4/H TYR 100Q O no hydrogen 2.714 N/A 7t77 #4/h MAN 6 O4 7t77 #4/H HIS 100R ND1 no hydrogen 3.351 N/A 7t77 #4/h MAN 6 O6 7t77 #4/H TYR 100Q O no hydrogen 4.679 N/A 7t77 #4/h MAN 6 O6 7t77 #4/L ASP 50 OD1 no hydrogen 3.389 N/A 7t77 #4/j NAG 2 N2 7t77 #4/H TYR 100K OH no hydrogen 2.783 N/A 7t77 #4/j NAG 2 O3 7t77 #4/H TYR 100K OH no hydrogen 4.518 N/A 7t77 #4/j BMA 3 O2 7t77 #4/H GLY 54 O no hydrogen 4.057 N/A 7t77 #4/j MAN 5 O2 7t77 #4/H ARG 71 O no hydrogen 5.083 N/A 7t77 #4/j MAN 5 O4 7t77 #4/H ASP 72 OD1 no hydrogen 3.091 N/A 7t77 #4/j MAN 5 O4 7t77 #4/H SER 74 OG no hydrogen 4.355 N/A 7t77 #4/j MAN 5 O6 7t77 #4/H ASP 72 OD1 no hydrogen 2.858 N/A 7t77 #4/j MAN 5 O6 7t77 #4/H SER 74 OG no hydrogen 3.762 N/A 305 hydrogen bonds found > select :NAG, NAM, BMA, MAN 4404 atoms, 4526 bonds, 483 pseudobonds, 327 residues, 5 models selected > style sel & #!1 sphere Changed 1137 atom styles > select clear > transparency 50 :NAG, NAM, BMA, MAN sphere Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels', 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword > transparency 50 :NAG, NAM, BMA, MAN surfaces Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels', 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword > transparency 50 :NAG, NAM, BMA, MAN Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels', 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword > transparency 50 :NAG, NAM, BMA, MAN Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels', 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword > transparency 50 #1 :NAG, NAM, BMA, MAN Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels', 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword > transparency 50 #1 :NAG, NAM, BMA, MAN atoms Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels', 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword > transparency :NAG, NAM, BMA, MAN atoms Missing or invalid ""percent"" argument: Expected a number > transparency :NAG, NAM, BMA, MAN atoms 50 Missing or invalid ""percent"" argument: Expected a number > transparency :NAG, NAM, BMA, MAN 50 > transparency :NAG, NAM, BMA, MAN 50 atoms > transparency :NAG, NAM, BMA, MAN 10 atoms > transparency :NAG, NAM, BMA, MAN 0 atoms > show #!2 models > hide #!1 models > show #!3 models > hide #!2 models > show #!4 models > hide #!3 models > show #!3 models > hide #!4 models > show #!2 models > hide #!3 models > show #!1 models > hide #!2 models > close #6 > select :NAG, NAM, BMA, MAN 4404 atoms, 4526 bonds, 327 residues, 4 models selected > select #1 :NAG, NAM, BMA, MAN 1137 atoms, 1169 bonds, 84 residues, 1 model selected > select clear > hide #!1 atoms > show #!1 atoms > hide #!1 atoms > select #1 :NAG, NAM, BMA, MAN 1137 atoms, 1169 bonds, 84 residues, 1 model selected > style sel sphere Changed 1137 atom styles > show sel atoms > select clear > save ""/Users/sphulera/OneDrive - The Scripps Research > Institute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession#1.cxs"" > close #5 > distance #1 /B :795 @O6 #1 /H :100A @OD2 Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 and /H ASP 100A OD2: 2.836Å > show #1 /B :795 #1 /H :100A > ui tool show Distances > distance style color #ff85ff > distance style color #d783ff > distance style color black > close #5 > distance #1 /B :795 @O6 #1 /H :100A @OD2 Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 and /H ASP 100A OD2: 2.836Å > ~hbonds > distance style symbol false > distance style symbol true > hide #5.1 models > distance style dashes 8 > distance style dashes 7 > distance style dashes 6 > distance style dashes 5 > distance style dashes 4 > distance style dashes 3 > distance style dashes 2 > distance style dashes 3 > distance style dashes 4 > distance style dashes 5 > distance style dashes 6 > distance style dashes 7 > distance style dashes 8 > distance style dashes 9 > distance style dashes 10 > distance style dashes 11 > distance style dashes 12 > distance style dashes 13 > distance style dashes 14 > distance style radius 0.05 > distance #1 /B :793 @O2 #1 /L :53 @OG Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 and /L SER 53 OG: 3.462Å > show #1 /B :793 #1 /L :53 > show #1 /B :794 #1 /L :52 > distance #1 /B :794 @O3 #1 /L :52 @O Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O3 and /L SER 52 O: 2.876Å > distance #1 /A :796 @O6 #1 /H :100B @O3 Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or one or more measurable objects and one or more atoms, got 1 atoms and 0 measurable objects > show #1 /A :769 #1 /H :100B > distance #1 /A :769 @O6 #1 /H :100B @O3 Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 and /H TYS 100B O3: 3.280Å > distance #1 /B :792 @O4 #1 /L :31 @OH Distance between Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 and /L TYR 31 OH: 3.268Å > show #1 /B :792 #1 /L :31 > distance style radius 0.01 > distance style radius 0.02 > distance style radius 0.04 > distance style radius 0.045 > distance style radius 0.05 > distance style dashes 20 > select #1 /A,B,C,H,L 16689 atoms, 17142 bonds, 17 pseudobonds, 2048 residues, 3 models selected > ui tool show H-Bonds > hbonds sel restrict both interModel false distSlop 2.0 intraMol false > intraRes false reveal true log true Finding intramodel H-bonds Constraints relaxed by 2 angstroms and 20 degrees Models used: 1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb 71 H-bonds H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist): Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A ASN 160 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O2 no hydrogen 3.314 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 158 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 3.190 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 no hydrogen 3.671 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE2 no hydrogen 5.106 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 O no hydrogen 4.793 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 32 OD1 no hydrogen 2.314 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 168 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G OE1 no hydrogen 4.195 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E O no hydrogen 2.894 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG no hydrogen 4.810 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 NE Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100F OH no hydrogen 3.847 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD1 no hydrogen 2.460 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 3.284 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 2.527 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J OD2 no hydrogen 3.110 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B TYR 173 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ILE 92 O no hydrogen 4.536 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG no hydrogen 4.524 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 189 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 O no hydrogen 3.911 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H THR 57 O no hydrogen 4.539 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 305 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 58 OD1 no hydrogen 2.564 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ARG 169 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 100D OH no hydrogen 3.779 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 4.851 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 30 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 4.640 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ILE 184 O no hydrogen 5.017 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 31 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/C ASN 185 OD1 no hydrogen 2.524 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYR 33 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 170 OE1 no hydrogen 3.642 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no hydrogen 2.564 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no hydrogen 3.729 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no hydrogen 4.588 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no hydrogen 4.208 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 50 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B LYS 171 O no hydrogen 2.427 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.676 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ARG 53 NH2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.726 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H HIS 54 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B THR 163 OG1 no hydrogen 3.671 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASN 56 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B SER 306 O no hydrogen 3.199 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LYS 64 NZ Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ILE 323 O no hydrogen 4.809 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.005 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H SER 100E OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ASP 167 O no hydrogen 3.854 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLU 100G N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 2.874 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 100H N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B ARG 169 O no hydrogen 4.086 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.866 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no hydrogen 2.822 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 28 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B GLN 187 OE1 no hydrogen 5.022 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no hydrogen 3.808 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no hydrogen 3.201 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no hydrogen 4.990 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no hydrogen 4.790 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no hydrogen 2.623 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no hydrogen 3.107 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no hydrogen 3.957 N/A 71 hydrogen bonds found > select clear > ~hbonds > select #1 /A,B,C: NAG, NAM, BMA, MAN #1 /H,L 2930 atoms, 3010 bonds, 5 pseudobonds, 314 residues, 2 models selected > ui tool show H-Bonds > hbonds sel restrict both interModel false distSlop 2.0 intraMol false > intraRes false reveal true log true Finding intramodel H-bonds Constraints relaxed by 2 angstroms and 20 degrees Models used: 1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb 35 H-bonds H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist): Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O1 no hydrogen 3.540 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/A NAG 769 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H TYS 100B O3 no hydrogen 3.280 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 768 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PRO 61 O no hydrogen 3.966 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 OD1 no hydrogen 3.346 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.863 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 O no hydrogen 5.090 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 50 O no hydrogen 4.019 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH no hydrogen 3.268 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG no hydrogen 3.462 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 52 O no hydrogen 4.780 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 794 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 64 O no hydrogen 4.986 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 5.036 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD1 no hydrogen 4.949 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O3 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 4.486 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O4 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.721 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100 OD1 no hydrogen 4.724 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 795 O6 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100A OD2 no hydrogen 2.836 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 OE1 no hydrogen 2.564 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLY 44 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 100 OE1 no hydrogen 3.729 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLY 99 O no hydrogen 4.588 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PRO 96 O no hydrogen 4.208 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 91 O no hydrogen 4.866 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH no hydrogen 2.822 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O4 no hydrogen 3.268 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 31 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 792 O5 no hydrogen 4.218 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 769 O6 no hydrogen 3.704 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ASN 32 ND2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B NAG 770 O7 no hydrogen 2.290 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TYR 36 OH Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H PHE 100L O no hydrogen 3.808 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 38 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 39 OE1 no hydrogen 3.201 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L ALA 43 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H GLN 105 OE1 no hydrogen 4.990 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L LEU 46 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 101 O no hydrogen 4.790 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L SER 53 OG Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/B MAN 793 O2 no hydrogen 3.462 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L GLN 89 NE2 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H ASP 100J O no hydrogen 2.623 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L TRP 94 NE1 Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H CYS 47 O no hydrogen 3.107 N/A Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/L PHE 98 N Q10M-055_Q23NFL_J1297_real_space_refined_009.pdb #1/H LEU 45 O no hydrogen 3.957 N/A 35 hydrogen bonds found > select clear > select #1 /A,B,C,H,L ~:NAG,NAM,BMA,MAN Expected a keyword > select #1 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN 15552 atoms, 15921 bonds, 25 pseudobonds, 1964 residues, 3 models selected > hide sel atoms > ~hbonds > show #1 /B :792 #1 /L :31 > show #1 /A :769 #1 /H :100B > show #1 /B :794 #1 /L :52 > show #1 /B :792,794,795,793,769 #1 /L :52 > select clear > show #1 /B :792,794,795,793,769 #1 /L :31,100B,53,52 #1 /H :100A > select clear > list view Unknown command: list view > view list Named views: TYR100B > view TYR100B > select clear > ui tool show ""Side View"" > hide #!1 models > show #!2 models > select #2 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN 14860 atoms, 15167 bonds, 20 pseudobonds, 1886 residues, 2 models selected > hide sel atoms > select #2 :NAG,NAM,BMA,MAN 971 atoms, 994 bonds, 73 residues, 1 model selected > style sel sphere Changed 971 atom styles > show #!1 models > hide #!2 models > select #A :NAG,NAM,BMA,MAN Expected an objects specifier or a keyword > select #1 /A :NAG,NAM,BMA,MAN 372 atoms, 381 bonds, 27 residues, 1 model selected > select #1 /A,B,C :180 24 atoms, 21 bonds, 3 residues, 1 model selected > show sel atoms > hide sel atoms > select #1 /A,B,C :160 24 atoms, 21 bonds, 3 residues, 1 model selected > show sel atoms > select #1 /A,B,C :156 24 atoms, 21 bonds, 3 residues, 1 model selected > show sel atoms > select clear > select #1 /A,B,C :160 24 atoms, 21 bonds, 3 residues, 1 model selected > show sel atoms > select #1 /A,B,C :197 24 atoms, 21 bonds, 3 residues, 1 model selected > show sel atoms > select #1 /A,B,C :301 24 atoms, 21 bonds, 3 residues, 1 model selected > show sel atoms > select clear > view list Named views: TYR100B > view TYR100B > lighting soft > lighting simple > lighting soft > lighting full > lighting soft > save ""/Users/sphulera/OneDrive - The Scripps Research > Institute/EM/Wyatt_Lab/Final_models_maps_Q23presentation/glycansession#1.cxs"" > show #!2 models > hide #!1 models > select #2 /B :731 #2 /L 31 Expected a keyword > select #2 /B :731 #2 /L :31 20 atoms, 19 bonds, 2 residues, 1 model selected > show sel atoms > distance #2 /B :731 @O6 #2 /L :31 @OG Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 731 O6 and /L SER 31 OG: 2.808Å > show #!1 models > hide #!1 models > distance #2 /B :703 @O4 #2 /L :50 @nz Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 703 O4 and /L LYS 50 NZ: 3.574Å > show #2 /B :703 #2 /L :50 > show #2 /C :703 #2 /H :100A > distance #2 /C :703 @O6 #2 /H :100A @OE1 Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C NAG 703 O6 and /H GLU 100A OE1: 3.271Å > distance #2 /C :733 @O4 #2 /H :97 @O Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O4 and /H ILE 97 O: 3.751Å > show #2 /H :97 > distance #2 /B :730 @O6 #2 /L :1 @N Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B NAG 730 O6 and /L ASP 1 N: 3.632Å > show #2 /L :1 @N > show #2 /L :1 > distance #2 /c :733 @O6 #2 /L :56 @OD1 Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O6 and /L ASP 56 OD1: 8.841Å > show #2 /c :733 #2 /L :56 > show #2 /c :744 #2 /H :1 > distance #2 /c :744 &O6 #2 /H :1 @N Expected a keyword > distance #2 /C :744 &O6 #2 /H :1 @N Expected a keyword > distance #2 /C :744 @O6 #2 /H :1 @N Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 744 O6 and /H GLN 1 N: 2.843Å > select clear > show #!1 models > hide #!1 models > show #!1 models > hide #!2 models > show #!2 models > hide #!1 models > show #!1 models > hide #!2 models > show #!3 models > distance #3 /C :729 @O3 #3 /L :1 @N Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 729 O3 and /L ASP 1 N: 95.755Å > ~distance #2/C:733@O6 #2/L:56@OD1 > distance #3 /b :729 @O3 #3 /L :1 @N Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 and /L ASP 1 N: 3.011Å > show #3 /b :729 @O3 #3 /L :1 @N > hide #!1 models > ~distance #3/C:729@O3 #3/L:1@N > select #3 /A,B,C,H,L & ~:NAG,NAM,BMA,MAN 14917 atoms, 15255 bonds, 19 pseudobonds, 1896 residues, 2 models selected > hide sel atoms > distance #3 /B :729 @O3 #3 /L :1 @OD1 Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 729 O3 and /L ASP 1 OD1: 2.873Å > show #3 /B :729 #3 /L :1 > color (#!3 & sel) byhetero > select clear > show #3 /B :734 #3 /L :66 > distance #3 /B :734 @O4 #3 /L :66 @N Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 734 O4 and /L GLY 66 N: 2.941Å > distance #3 /B :733 @O4 #3 /L :31 @N Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O4 and /L SER 31 N: 7.644Å > ~distance #3/B:733@O4 #3/L:31@N > distance #3 /B :733 @O6 #3 /L :31 @N Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 and /L SER 31 N: 3.809Å > show #3 /B :733 @O6 #3 /L :31 @N > show #3 /B :733 #3 /L :31 > show #3 /B :731 #3 /H :100G > distance #3 /B :731 @O4 #3 /H :100G@OH Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 731 O4 and /H TYR 100G OH: 18.489Å > ~distance #3/B:731@O4 #3/H:100G@OH > distance #3 /C :731 @O4 #3 /H :100G@OH Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C NAG 731 O4 and /H TYR 100G OH: 3.821Å > show #3 /c :160 > show #3 /A :160 > show #3 /B :160 > show #3 /C :733 /H :97 > distance #3 /C :733 @O6 /H :97 @O Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O6 and /H ILE 97 O: 2.874Å > distance #3 /B :703 @O6 /H :100H @O Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 and /H TYR 100H O: 8.058Å > show #3 /B :703 @O6 /H :100H @O > ~distance #3/B:703@O6 #3/H:100H@O > show #3 /B :703 @O6 #3 /H :100H @O > distance #3 /B :703 @O6 #3 /H :100H @O Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 and /H TYR 100H O: 8.058Å > ~distance #3/B:703@O6 #3/H:100H@O > distance #3 /B :703 @O6 #3 /H :100H @OH Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B NAG 703 O6 and /H TYR 100H OH: 3.531Å > show #3 /B :703 @O6 #3 /H :100H @OH > show #3 /B :703 #3 /H :100H > show #3 /C :733 #3 /L :56 > distance #3 /C :733 @O4 #3 /L :56 @OD2 Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/C MAN 733 O4 and /L ASP 56 OD2: 3.734Å > show #3 /B :133 > hide #!3 models > show #!2 models > show #2 :160 > show #2 :156 > distance save /Users/sphulera/Desktop/test > show #2 :133 > show #2 :197 > show #2 :301 > distance #2 /B :733 @O6 #2 /L :31 @N Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/B MAN 733 O6 and /L SER 31 N: 3.309Å > ~distance #3/B:733@O6 #3/L:31@N > distance #2 /B :733 @O3 #2 /L :31 @OD1 Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or one or more measurable objects and one or more atoms, got 1 atoms and 0 measurable objects > distance #2 /C :733 @O3 #2 /L :31 @OD1 Expected exactly two atoms and/or measurable objects (e.g. axes, planes), or one or more measurable objects and one or more atoms, got 1 atoms and 0 measurable objects > distance #2 /C :733 @O3 #2 /L :56 @OD1 Distance between Q12BBM-069_BG505NFL_J2029_real_space_refined_037.pdb #2/C MAN 733 O3 and /L ASP 56 OD1: 2.931Å > show #!1 models > hide #!2 models > view list Named views: TYR100B > view TYR100B > ui tool show ""Side View"" > show #!2 models > hide #!1 models > show #!3 models > hide #!2 models > distance #2 /B :733 @O6 #2 /L :31 @N Distance already exists; modify distance properties with 'distance style' > show #!2 models > hide #!3 models > show #!3 models > distance #3 /B :733 @O6 #3 /L :31 @N Distance between Q12QBM-007_BG505NFL_J1588_real_space_refined_008.pdb #3/B MAN 733 O6 and /L SER 31 N: 3.809Å > hide #!3 models > show #!3 models > hide #!2 models > show #!2 models > hide #!3 models > show #!3 models > hide #!3 models > hide #!2 models > show #!1 models > view name G1 > view name G2 > show #!2 models > hide #!1 models > show #!3 models > hide #!2 models > view name G3 > view g1 Expected an objects specifier or a view name or a keyword > view G1 > hide #!3 models > show #!2 models > view G1 > show #!1 models > hide #!2 models > show #!2 models > hide #!2 models > show #!2 models > hide #!2 models > show #!3 models > hide #!1 models > show #!1 models > view G2 > hide #!3 models > view G1 > view G2 > show #!2 models > hide #!1 models > show #!3 models > hide #!2 models > show #!1 models > hide #!3 models > view G2 > view G3 > show #!2 models > hide #!1 models > show #!1 models > hide #!2 models > show #!2 models > hide #!1 models > show #!3 models > hide #!2 models > hide #!3 models > show #!1 models > view G1 > select clear > save /Users/sphulera/Desktop/image53.png supersample 3 > view G2 > save /Users/sphulera/Desktop/image54.png supersample 3 > view G3 > save /Users/sphulera/Desktop/image55.png supersample 3 > show #!2 models > hide #!1 models > view G2 > save /Users/sphulera/Desktop/image56.png supersample 3 > view G3 > save /Users/sphulera/Desktop/image57.png supersample 3 > show #!3 models > hide #!2 models > view G2 > save /Users/sphulera/Desktop/image58.png supersample 3 > view G3 > save /Users/sphulera/Desktop/image59.png supersample 3 > view G2 > select clear > select /L :24-34 349 atoms, 350 bonds, 47 residues, 4 models selected > view G2 ===== Log before crash end ===== Log: Startup Messages --- note | available bundle cache has not been initialized yet UCSF ChimeraX version: 1.9 (2024-12-11) © 2016-2024 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 Metal - 88.1 OpenGL renderer: Apple M3 OpenGL vendor: Apple Python: 3.11.4 Locale: UTF-8 Qt version: PyQt6 6.7.1, Qt 6.7.1 Qt runtime version: 6.7.3 Qt platform: cocoa Hardware: Hardware Overview: Model Name: MacBook Air Model Identifier: Mac15,12 Model Number: Z1B600163LL/A Chip: Apple M3 Total Number of Cores: 8 (4 performance and 4 efficiency) Memory: 16 GB System Firmware Version: 10151.121.1 OS Loader Version: 10151.121.1 Software: System Software Overview: System Version: macOS 14.5 (23F79) Kernel Version: Darwin 23.5.0 Time since boot: 4 days, 23 hours, 31 minutes Graphics/Displays: Apple M3: Chipset Model: Apple M3 Type: GPU Bus: Built-In Total Number of Cores: 10 Vendor: Apple (0x106b) Metal Support: Metal 3 Displays: Color LCD: Display Type: Built-in Liquid Retina Display Resolution: 2560 x 1664 Retina Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: Yes Connection Type: Internal LG HDR 4K: Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition) UI Looks like: 1920 x 1080 @ 60.00Hz Mirror: Off Online: Yes Rotation: Supported Installed Packages: alabaster: 1.0.0 anyio: 4.7.0 appdirs: 1.4.4 appnope: 0.1.4 asttokens: 3.0.0 auditwheel: 6.1.0 babel: 2.16.0 beautifulsoup4: 4.12.3 blockdiag: 3.0.0 blosc2: 3.0.0 build: 1.2.1 certifi: 2023.11.17 cftime: 1.6.4.post1 charset-normalizer: 3.4.0 ChimeraX-AddCharge: 1.5.18 ChimeraX-AddH: 2.2.6 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.5 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.16.1 ChimeraX-AlphaFold: 1.0.1 ChimeraX-AltlocExplorer: 1.1.2 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.58.8 ChimeraX-AtomicLibrary: 14.1.11 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 3.0.0 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.1 ChimeraX-BuildStructure: 2.13.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.4.0 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.4 ChimeraX-ChemGroup: 2.0.1 ChimeraX-Clashes: 2.3 ChimeraX-ColorActions: 1.0.5 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.6 ChimeraX-CommandLine: 1.2.5 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.9 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.4 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.3 ChimeraX-Dicom: 1.2.6 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.1.3 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.4.1 ChimeraX-Hbonds: 2.5 ChimeraX-Help: 1.3 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.3 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-KVFinder: 1.2.1 ChimeraX-Label: 1.1.14 ChimeraX-ListInfo: 1.2.2 ChimeraX-Log: 1.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.1 ChimeraX-Map: 1.3 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.1.6 ChimeraX-MCopy: 1.0 ChimeraX-MDcrds: 2.7.2 ChimeraX-MedicalToolbar: 1.1 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.14.2 ChimeraX-MMTF: 2.2 ChimeraX-ModelArchive: 1.0 ChimeraX-Modeller: 1.5.18 ChimeraX-ModelPanel: 1.5 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-MutationScores: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.2 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.14 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.6 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.4 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.2 ChimeraX-PubChem: 2.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.6.2 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.3.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.2 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.5.6 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.14 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.2.0 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-SimilarStructures: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.18.1 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2.3 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.41 ChimeraX-Umap: 1.0 ChimeraX-uniprot: 2.3.1 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.4.4 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.4 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.2.2 contourpy: 1.3.1 cxservices: 1.2.3 cycler: 0.12.1 Cython: 3.0.10 debugpy: 1.8.9 decorator: 5.1.1 docutils: 0.21.2 executing: 2.1.0 filelock: 3.15.4 fonttools: 4.55.3 funcparserlib: 2.0.0a0 glfw: 2.8.0 grako: 3.16.5 h11: 0.14.0 h5py: 3.12.1 html2text: 2024.2.26 httpcore: 1.0.7 httpx: 0.28.1 idna: 3.10 ihm: 1.3 imagecodecs: 2024.6.1 imagesize: 1.4.1 ipykernel: 6.29.5 ipython: 8.26.0 ipywidgets: 8.1.5 jedi: 0.19.1 Jinja2: 3.1.4 jupyter_client: 8.6.2 jupyter_core: 5.7.2 jupyterlab_widgets: 3.0.13 kiwisolver: 1.4.7 line_profiler: 4.1.3 lxml: 5.2.2 lz4: 4.3.3 MarkupSafe: 3.0.2 matplotlib: 3.9.2 matplotlib-inline: 0.1.7 msgpack: 1.0.8 ndindex: 1.9.2 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.3 nibabel: 5.2.0 nptyping: 2.5.0 numexpr: 2.10.2 numpy: 1.26.4 openvr: 1.26.701 packaging: 23.2 ParmEd: 4.2.2 parso: 0.8.4 pep517: 0.13.1 pexpect: 4.9.0 pillow: 10.4.0 pip: 24.2 pkginfo: 1.11.1 platformdirs: 4.3.6 prompt_toolkit: 3.0.48 psutil: 6.0.0 ptyprocess: 0.7.0 pure_eval: 0.2.3 py-cpuinfo: 9.0.0 pycollada: 0.8 pydicom: 2.4.4 pyelftools: 0.31 Pygments: 2.18.0 pynmrstar: 3.3.4 pynrrd: 1.0.0 PyOpenGL: 3.1.7 PyOpenGL-accelerate: 3.1.7 pyopenxr: 1.0.3401 pyparsing: 3.2.0 pyproject_hooks: 1.2.0 PyQt6-commercial: 6.7.1 PyQt6-Qt6: 6.7.3 PyQt6-WebEngine-commercial: 6.7.0 PyQt6-WebEngine-Qt6: 6.7.3 PyQt6-WebEngineSubwheel-Qt6: 6.7.3 PyQt6_sip: 13.8.0 python-dateutil: 2.9.0.post0 pytz: 2024.2 pyzmq: 26.2.0 qtconsole: 5.5.2 QtPy: 2.4.2 qtshim: 1.0 RandomWords: 0.4.0 requests: 2.32.3 scipy: 1.14.0 setuptools: 72.1.0 sfftk-rw: 0.8.1 six: 1.16.0 sniffio: 1.3.1 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.6 Sphinx: 8.0.2 sphinx-autodoc-typehints: 2.2.3 sphinxcontrib-applehelp: 2.0.0 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 2.0.0 sphinxcontrib-htmlhelp: 2.1.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 2.0.0 sphinxcontrib-serializinghtml: 2.0.0 stack-data: 0.6.3 superqt: 0.6.3 tables: 3.10.1 tcia_utils: 1.5.1 tifffile: 2024.7.24 tinyarray: 1.2.4 tornado: 6.4.2 traitlets: 5.14.3 typing_extensions: 4.12.2 tzdata: 2024.2 urllib3: 2.2.3 wcwidth: 0.2.13 webcolors: 24.6.0 wheel: 0.43.0 wheel-filename: 1.4.1 widgetsnbextension: 4.0.13 }}} " defect closed normal Window Toolkit duplicate all ChimeraX