id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
16210	Crash changing QDockWidget geometry	chimerax-bug-report@…	Eric Pettersen	"{{{
The following bug report has been submitted:
Platform:        macOS-14.6.1-x86_64-i386-64bit
ChimeraX Version: 1.7.1 (2024-01-23 01:58:08 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: 

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  ""version"" : 2,
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  ""procPath"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/MacOS\/ChimeraX"",
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  ""parentPid"" : 1,
  ""coalitionName"" : ""edu.ucsf.cgl.ChimeraX"",
  ""crashReporterKey"" : ""718EAE81-C4B5-6E12-7A3A-7719186E7652"",
  ""codeSigningID"" : ""edu.ucsf.cgl.ChimeraX"",
  ""codeSigningTeamID"" : ""LWV8X224YF"",
  ""codeSigningFlags"" : 570491649,
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  ""sleepWakeUUID"" : ""1F77A897-540D-44DF-828B-E003A2B25B7B"",
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===== Log before crash start =====
Startup Messages  
---  
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle  
  
UCSF ChimeraX version: 1.7.1 (2024-01-23)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /Users/lic/Downloads/cryosparc_P115_J778_006_volume_map_sharp.mrc

Opened cryosparc_P115_J778_006_volume_map_sharp.mrc as #1, grid size
160,160,160, pixel 1.67, shown at level 0.318, step 1, values float32  

> open /Users/lic/Downloads/cryosparc_P115_J777_class_03_00142_volume.mrc

Opened cryosparc_P115_J777_class_03_00142_volume.mrc as #2, grid size
128,128,128, pixel 2.09, shown at level 0.313, step 1, values float32  

> volume #2 level 0.5742

> volume #2 level 0.4924

> show #!1 models

> volume #1 level 1.608

> select add #1

2 models selected  

> ui mousemode right ""rotate selected models""

> view matrix models
> #1,-0.77544,-0.60887,0.16726,297.58,-0.52028,0.76622,0.37712,50.23,-0.35777,0.20541,-0.91094,279.1

> view matrix models
> #1,-0.91264,-0.40231,0.072364,301.29,-0.40209,0.91542,0.018212,62.935,-0.073571,-0.012476,-0.99721,281.62

> volume #1 level 0.5582

> ui tool show ""Fit in Map""

> fitmap #1 inMap #2

Fit map cryosparc_P115_J778_006_volume_map_sharp.mrc in map
cryosparc_P115_J777_class_03_00142_volume.mrc using 19129 points  
correlation = 0.7551, correlation about mean = 0.3415, overlap = 1.581e+04  
steps = 152, shift = 1.85, angle = 32.9 degrees  
  
Position of cryosparc_P115_J778_006_volume_map_sharp.mrc (#1) relative to
cryosparc_P115_J777_class_03_00142_volume.mrc (#2) coordinates:  
Matrix rotation and translation  
-0.98623994 0.02817865 -0.16290105 281.01315874  
-0.02471636 0.94915935 0.31382422 -30.28133341  
0.16346220 0.31353230 -0.93540238 197.09077129  
Axis -0.00088294 -0.98711883 -0.15998635  
Axis point 132.22409250 0.00000000 112.84591379  
Rotation angle (degrees) 170.48469696  
Shift along axis -1.88867670  
  

> select subtract #1

Nothing selected  

> volume #1 level 0.6201

> volume #2 level 0.3659

> volume #1 level 1.363

> volume #2 level 0.5205

> hide #!2 models

> open
> ""/Users/lic/Library/Containers/com.tencent.xinWeChat/Data/Library/Application
> Support/com.tencent.xinWeChat/2.0b4.0.9/5008959a336c35cb535dcb456c1f9e37/Message/MessageTemp/290d89ca515c34df92fa7ea44dd94fd5/File/PDGFR-
> DD_model.pdb""

Chain information for PDGFR-DD_model.pdb #3  
---  
Chain | Description  
A B | No description available  
C | No description available  
D | No description available  
H | No description available  
  

> show cartoons

> hide atoms

> select add #3

19268 atoms, 19483 bonds, 1226 residues, 1 model selected  

> view matrix models
> #3,0.78386,0.086259,0.61492,-101.23,0.14716,-0.9879,-0.049008,396.56,0.60325,0.12891,-0.78706,219.74

> view matrix models
> #3,0.93352,0.086027,-0.34805,66.86,0.027206,-0.98498,-0.17049,444.93,-0.35749,0.14969,-0.92184,435.34

> view matrix models
> #3,0.99674,-0.015562,-0.079113,20.173,-0.028243,-0.98642,-0.16179,454.53,-0.07552,0.1635,-0.98365,388.74

> view matrix models
> #3,0.99586,0.016174,0.089399,-20.937,0.028022,-0.99073,-0.13291,438.24,0.086421,0.13486,-0.98709,363.03

> ui mousemode right ""translate selected models""

> view matrix models
> #3,0.99586,0.016174,0.089399,-63.454,0.028022,-0.99073,-0.13291,343.28,0.086421,0.13486,-0.98709,254.23

> view matrix models
> #3,0.99586,0.016174,0.089399,-59.283,0.028022,-0.99073,-0.13291,355.29,0.086421,0.13486,-0.98709,274.71

> view matrix models
> #3,0.99586,0.016174,0.089399,-75.85,0.028022,-0.99073,-0.13291,355.75,0.086421,0.13486,-0.98709,271.19

> view matrix models
> #3,0.99586,0.016174,0.089399,-84.898,0.028022,-0.99073,-0.13291,351.6,0.086421,0.13486,-0.98709,278.67

> fitmap #3 inMap #1

Fit molecule PDGFR-DD_model.pdb (#3) to map
cryosparc_P115_J778_006_volume_map_sharp.mrc (#1) using 19268 atoms  
average map value = 0.6628, steps = 160  
shifted from previous position = 5.56  
rotated from previous position = 14.6 degrees  
atoms outside contour = 16271, contour level = 1.363  
  
Position of PDGFR-DD_model.pdb (#3) relative to
cryosparc_P115_J778_006_volume_map_sharp.mrc (#1) coordinates:  
Matrix rotation and translation  
-0.99632928 0.05068832 -0.06898298 334.63748910  
-0.02933149 -0.95920626 -0.28118148 388.01285592  
-0.08042152 -0.27812597 0.95717205 22.02349981  
Axis 0.03777321 0.14140695 -0.98923064  
Axis point 171.64078569 192.17629869 0.00000000  
Rotation angle (degrees) 177.68201268  
Shift along axis 45.72172589  
  

> select subtract #3

Nothing selected  

> set bgColor white

> transparency #1,3 50

> graphics silhouettes true

> volume #1 level 1.363

> volume #1 level 0.4681

> volume #1 level 0.5207

> volume #1 level 1.258

> ui tool show ""Color Zone""

> color zone #1 near #3 distance 10.05

> color zone #1 near #3 distance 10.58

> color zone #1 near #3 distance 5.57

> color zone #1 near #3 distance 5.06

> color zone #1 near #3 distance 9.62

> transparency #1,3 20

> transparency #1,3 30

> lighting full

> graphics silhouettes false

> lighting full

> lighting soft

> graphics silhouettes true

> volume #1 level 1.792

> color zone #1 near #3 distance 9.62

> volume splitbyzone #1

Opened cryosparc_P115_J778_006_volume_map_sharp.mrc 0 as #4.1, grid size
160,160,160, pixel 1.67, shown at level 1.79, step 1, values float32  
Opened cryosparc_P115_J778_006_volume_map_sharp.mrc 1 as #4.2, grid size
160,160,160, pixel 1.67, shown at level 1.79, step 1, values float32  
Opened cryosparc_P115_J778_006_volume_map_sharp.mrc 2 as #4.3, grid size
160,160,160, pixel 1.67, shown at level 1.79, step 1, values float32  
Opened cryosparc_P115_J778_006_volume_map_sharp.mrc 3 as #4.4, grid size
160,160,160, pixel 1.67, shown at level 1.79, step 1, values float32  
Opened cryosparc_P115_J778_006_volume_map_sharp.mrc 4 as #4.5, grid size
160,160,160, pixel 1.67, shown at level 1.79, step 1, values float32  

> transparency #3-4 40

> show atoms

> style stick

Changed 19268 atom styles  

> select clear

> color #3-4 byhetero

> hide atoms

> open /Users/lic/Downloads/cryosparc_P115_J778_006_volume_map.mrc

Opened cryosparc_P115_J778_006_volume_map.mrc as #5, grid size 160,160,160,
pixel 1.67, shown at level 0.247, step 1, values float32  

> hide #3 models

> hide #!4 models

> hide #!4.1 models

> hide #!4.2 models

> hide #!4.3 models

> hide #!4.4 models

> hide #!4.5 models

> volume #5 level 0.8319

> volume #5 level 0.6226

> volume #5 level 0.6653

> show #!2 models

> hide #!2 models

> show #!1 models

> hide #!1 models

> show #!1 models

> hide #!1 models

> show #3 models

> select add #5

2 models selected  

> ui mousemode right ""rotate selected models""

> view matrix models
> #5,-0.98075,-0.12017,-0.1539,305.34,-0.12271,0.99242,0.0070905,16.643,0.15188,0.025839,-0.98806,249.95

> view matrix models
> #5,-0.89228,0.42039,-0.16462,221.13,0.43732,0.8954,-0.083784,-33.297,0.11218,-0.14675,-0.98279,278.13

> view matrix models
> #5,-0.83843,0.52056,-0.16142,199.74,0.49054,0.84984,0.19272,-72.386,0.2375,0.082397,-0.96789,227.89

> view matrix models
> #5,-0.97017,-0.22728,0.084387,285.67,-0.1862,0.92144,0.341,-11.115,-0.15526,0.31512,-0.93627,244.88

> fitmap #5 inMap #1

Fit map cryosparc_P115_J778_006_volume_map.mrc in map
cryosparc_P115_J778_006_volume_map_sharp.mrc using 10702 points  
correlation = 0.8801, correlation about mean = 0.779, overlap = 1.932e+04  
steps = 116, shift = 6.3, angle = 20.6 degrees  
  
Position of cryosparc_P115_J778_006_volume_map.mrc (#5) relative to
cryosparc_P115_J778_006_volume_map_sharp.mrc (#1) coordinates:  
Matrix rotation and translation  
0.99999955 -0.00042137 -0.00085137 0.16300759  
0.00042133 0.99999991 -0.00004766 -0.05984791  
0.00085139 0.00004730 0.99999964 -0.11678673  
Axis 0.04991957 -0.89512755 0.44300645  
Axis point 142.44221090 0.00000000 190.80540616  
Rotation angle (degrees) 0.05449542  
Shift along axis 0.00997151  
  

> select subtract #5

Nothing selected  

> transparency #3,5 10

> volume #5 level 0.8704

> volume #5 level 0.6439

> volume #5 level 0.9473

> lighting full

> hide #3 models

> lighting full

> lighting soft

> lighting simple

> show #3 models

> volume #5 level 0.8746

> color zone #5 near #3 distance 10.05


===== Log before crash end =====

Log:
Startup Messages  
---  
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle  
  
UCSF ChimeraX version: 1.7.1 (2024-01-23)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 4.1 ATI-5.5.17
OpenGL renderer: AMD Radeon Pro 5300M OpenGL Engine
OpenGL vendor: ATI Technologies Inc.

Python: 3.11.2
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: MacBook Pro
      Model Identifier: MacBookPro16,1
      Processor Name: 6-Core Intel Core i7
      Processor Speed: 2.6 GHz
      Number of Processors: 1
      Total Number of Cores: 6
      L2 Cache (per Core): 256 KB
      L3 Cache: 12 MB
      Hyper-Threading Technology: Enabled
      Memory: 16 GB
      System Firmware Version: 2022.140.5.0.0 (iBridge: 21.16.6074.0.0,0)
      OS Loader Version: 580.140.1~8

Software:

    System Software Overview:

      System Version: macOS 14.6.1 (23G93)
      Kernel Version: Darwin 23.6.0
      Time since boot: 1天40分钟

Graphics/Displays:

    Intel UHD Graphics 630:

      Chipset Model: Intel UHD Graphics 630
      Type: GPU
      Bus: Built-In
      VRAM (Dynamic, Max): 1536 MB
      Vendor: Intel
      Device ID: 0x3e9b
      Revision ID: 0x0000
      Automatic Graphics Switching: Supported
      gMux Version: 5.0.0
      Metal Support: Metal 3

    AMD Radeon Pro 5300M:

      Chipset Model: AMD Radeon Pro 5300M
      Type: GPU
      Bus: PCIe
      PCIe Lane Width: x16
      VRAM (Total): 4 GB
      Vendor: AMD (0x1002)
      Device ID: 0x7340
      Revision ID: 0x0043
      ROM Revision: 113-D3220E-190
      VBIOS Version: 113-D32207P1-020
      Option ROM Version: 113-D32207P1-020
      EFI Driver Version: 01.A1.190
      Automatic Graphics Switching: Supported
      gMux Version: 5.0.0
      Metal Support: Metal 3
      Displays:
        Color LCD:
          Display Type: Built-In Retina LCD
          Resolution: 3072 x 1920 Retina
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal
        SE2717H/HX:
          Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
          UI Looks like: 1920 x 1080 @ 60.00Hz
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Display Serial Number: 0RY9M7AF031L
          Mirror: Off
          Online: Yes
          Rotation: Supported
          Connection Type: Thunderbolt/DisplayPort


Installed Packages:
    alabaster: 0.7.16
    appdirs: 1.4.4
    appnope: 0.1.3
    asttokens: 2.4.1
    Babel: 2.14.0
    backcall: 0.2.0
    beautifulsoup4: 4.11.2
    blockdiag: 3.0.0
    blosc2: 2.0.0
    build: 0.10.0
    certifi: 2022.12.7
    cftime: 1.6.3
    charset-normalizer: 3.3.2
    ChimeraX-AddCharge: 1.5.13
    ChimeraX-AddH: 2.2.5
    ChimeraX-AlignmentAlgorithms: 2.0.1
    ChimeraX-AlignmentHdrs: 3.4.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.12.2
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.1.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.49.1
    ChimeraX-AtomicLibrary: 12.1.5
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3.2
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.10.5
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.2
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.2
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.3.2
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-Clipper: 0.22.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.5
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.7.1
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2
    ChimeraX-DistMonitor: 1.4
    ChimeraX-DockPrep: 1.1.3
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ISOLDE: 1.7.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-Label: 1.1.8
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.1.6
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.1.4
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.1.2
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.6.1
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.12.1
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.14
    ChimeraX-ModelPanel: 1.4
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.1
    ChimeraX-NRRD: 1.1
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.13.1
    ChimeraX-PDB: 2.7.3
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.2
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.2
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.11
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.2
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.12.4
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.2
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.33.3
    ChimeraX-uniprot: 2.3
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.3.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.3
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.1
    contourpy: 1.2.0
    cxservices: 1.2.2
    cycler: 0.12.1
    Cython: 0.29.33
    debugpy: 1.8.0
    decorator: 5.1.1
    docutils: 0.19
    executing: 2.0.1
    filelock: 3.9.0
    fonttools: 4.47.2
    funcparserlib: 2.0.0a0
    glfw: 2.6.4
    grako: 3.16.5
    h5py: 3.10.0
    html2text: 2020.1.16
    idna: 3.6
    ihm: 0.38
    imagecodecs: 2023.9.18
    imagesize: 1.4.1
    ipykernel: 6.23.2
    ipython: 8.14.0
    ipython-genutils: 0.2.0
    ipywidgets: 8.1.1
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 8.2.0
    jupyter-core: 5.7.1
    jupyterlab-widgets: 3.0.9
    kiwisolver: 1.4.5
    line-profiler: 4.0.2
    lxml: 4.9.2
    lz4: 4.3.2
    MarkupSafe: 2.1.4
    matplotlib: 3.7.2
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.6.0
    netCDF4: 1.6.2
    networkx: 3.1
    nibabel: 5.0.1
    nptyping: 2.5.0
    numexpr: 2.8.8
    numpy: 1.25.1
    openvr: 1.23.701
    packaging: 21.3
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pexpect: 4.9.0
    pickleshare: 0.7.5
    pillow: 10.2.0
    pip: 23.0
    pkginfo: 1.9.6
    platformdirs: 4.1.0
    prompt-toolkit: 3.0.43
    psutil: 5.9.5
    ptyprocess: 0.7.0
    pure-eval: 0.2.2
    py-cpuinfo: 9.0.0
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.16.1
    pynrrd: 1.0.0
    PyOpenGL: 3.1.7
    PyOpenGL-accelerate: 3.1.7
    pyopenxr: 1.0.2801
    pyparsing: 3.0.9
    pyproject-hooks: 1.0.0
    PyQt6-commercial: 6.3.1
    PyQt6-Qt6: 6.3.2
    PyQt6-sip: 13.4.0
    PyQt6-WebEngine-commercial: 6.3.1
    PyQt6-WebEngine-Qt6: 6.3.2
    python-dateutil: 2.8.2
    pytz: 2023.3.post1
    pyzmq: 25.1.2
    qtconsole: 5.4.3
    QtPy: 2.4.1
    RandomWords: 0.4.0
    requests: 2.31.0
    scipy: 1.11.1
    setuptools: 67.4.0
    setuptools-scm: 7.0.5
    sfftk-rw: 0.7.3
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.5
    sphinx: 6.1.3
    sphinx-autodoc-typehints: 1.22
    sphinxcontrib-applehelp: 1.0.8
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.6
    sphinxcontrib-htmlhelp: 2.0.5
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.7
    sphinxcontrib-serializinghtml: 1.1.10
    stack-data: 0.6.3
    superqt: 0.5.0
    tables: 3.8.0
    tcia-utils: 1.5.1
    tifffile: 2023.7.18
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.4
    traitlets: 5.9.0
    typing-extensions: 4.9.0
    tzdata: 2023.4
    urllib3: 2.1.0
    wcwidth: 0.2.13
    webcolors: 1.12
    wheel: 0.38.4
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.9
}}}
"	defect	closed	normal		Window Toolkit		can't reproduce		Tom Goddard				all	ChimeraX