id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
16013	MOLE JSON treated as AlphaFold	bcneuman@…	Tom Goddard	"{{{
The following bug report has been submitted:
Platform:        Windows-10-10.0.22631
ChimeraX Version: 1.8 (2024-06-10 23:15:52 UTC)
Description
JSON files from ​MOLEonline no longer open and are promted to be a AlphaFold PAE file

Log:
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 1.8 (2024-06-10)  
© 2016-2024 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> lighting soft

> set bgColor white

> graphics silhouettes true

> open ""D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/J1568_H_af_fl_neo_real_space_refined_005-coot-0.pdb""

Chain information for J1568_H_af_fl_neo_real_space_refined_005-coot-0.pdb #1  
---  
Chain | Description  
A | No description available  
  

> open ""D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/json/data.json""

Opening an AlphaFold PAE file requires specifying the structure to associate.
Did not find an open structure from the same directory. To specify the
structure use menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command, for example  
  
open D:/OneDrive - UC Irvine/Gonen
lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/json/data.json
format pae structure #1  

> open ""D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2.json""

Opening an AlphaFold PAE file requires specifying the structure to associate.
Did not find an open structure from the same directory. To specify the
structure use menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command, for example  
  
open D:/OneDrive - UC Irvine/Gonen
lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2.json
format pae structure #1  

> lighting soft

> open ""D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2_pdb/tunnel_1.pdb""

Summary of feedback from opening D:/OneDrive - UC Irvine/Gonen
lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2_pdb/tunnel_1.pdb  
---  
warning | Ignored bad PDB record found on line 14  
REMARK ATOM NAM RES TUNID X Y Z Distnm RadiusA  
  

> open ""D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2.json""

Opening an AlphaFold PAE file requires specifying the structure to associate.
Did not find an open structure from the same directory. To specify the
structure use menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command, for example  
  
open D:/OneDrive - UC Irvine/Gonen
lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2.json
format pae structure #1  

> open ""D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/json/data.json""

Opening an AlphaFold PAE file requires specifying the structure to associate.
Did not find an open structure from the same directory. To specify the
structure use menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command, for example  
  
open D:/OneDrive - UC Irvine/Gonen
lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/json/data.json
format pae structure #1  

> ui tool show ""AlphaFold Error Plot""

QWindowsWindow::setGeometry: Unable to set geometry 558x125+2121+1326 (frame:
576x172+2112+1288) on QWidgetWindow/""QDockWidgetClassWindow"" on
""\\\\.\DISPLAY1"". Resulting geometry: 556x117+2122+1333 (frame:
574x164+2113+1295) margins: 9, 38, 9, 9 minimum size: 446x99 maximum size:
524287x524287 MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=655377, y=655406), mintrack=POINT(x=576, y=171)))  

Must choose path to predicted aligned file  

> alphafold pae #1 file ""D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/json/data.json""

JSON file ""D:/OneDrive - UC Irvine/Gonen
lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/json/data.json""
is not AlphaFold predicted aligned error data, expected a top level list  

> alphafold pae #1 file ""D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/json/data.json""

JSON file ""D:/OneDrive - UC Irvine/Gonen
lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/json/data.json""
is not AlphaFold predicted aligned error data, expected a top level list  

> help help:user/tools/alphafold.html#pae

QWindowsWindow::setGeometry: Unable to set geometry 1058x1104+1871+838 (frame:
1076x1151+1862+800) on QWidgetWindow/""QDockWidgetClassWindow"" on
""\\\\.\DISPLAY1"". Resulting geometry: 1056x1096+1872+845 (frame:
1074x1143+1863+807) margins: 9, 38, 9, 9 minimum size: 840x877 maximum size:
524287x524287 MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=655377, y=655406), mintrack=POINT(x=1068, y=1143)))  

> open ""D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/json/data.json""

Opening an AlphaFold PAE file requires specifying the structure to associate.
Did not find an open structure from the same directory. To specify the
structure use menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command, for example  
  
open D:/OneDrive - UC Irvine/Gonen
lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/json/data.json
format pae structure #1  

> open ""D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2.json""

Opening an AlphaFold PAE file requires specifying the structure to associate.
Did not find an open structure from the same directory. To specify the
structure use menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command, for example  
  
open D:/OneDrive - UC Irvine/Gonen
lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2.json
format pae structure #1  

> open D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2.json

'D:/OneDrive' has no suffix  

> hide #2 models

> show #2 models

> close #2

> open D:/OneDrive - UC Irvine/Gonen
> lab/neo1.5/MoleOnline/J1568/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2/mole_channels_uTDyg8jQUC2FWDZrAjDIw_2.json

'D:/OneDrive' has no suffix  

> open C:\Users\b-neu\Desktop\mole_channels_uTDyg8jQUC2FWDZrAjDIw_2.json

Opening an AlphaFold PAE file requires specifying the structure to associate.
Did not find an open structure from the same directory. To specify the
structure use menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command, for example  
  
open C:\Users\b-neu\Desktop\mole_channels_uTDyg8jQUC2FWDZrAjDIw_2.json format
pae structure #1  

> toolshed show

QWindowsWindow::setGeometry: Unable to set geometry 1058x1104+1871+838 (frame:
1076x1151+1862+800) on QWidgetWindow/""QDockWidgetClassWindow"" on
""\\\\.\DISPLAY1"". Resulting geometry: 1056x1096+1872+845 (frame:
1074x1143+1863+807) margins: 9, 38, 9, 9 minimum size: 840x877 maximum size:
524287x524287 MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=655377, y=655406), mintrack=POINT(x=1068, y=1143)))  

QWindowsWindow::setGeometry: Unable to set geometry 750x594+2025+1093 (frame:
768x641+2016+1055) on QWidgetWindow/""QDockWidgetClassWindow"" on
""\\\\.\DISPLAY1"". Resulting geometry: 748x586+2026+1100 (frame:
766x633+2017+1062) margins: 9, 38, 9, 9 minimum size: 600x321 maximum size:
524287x524287 MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=655377, y=655406), mintrack=POINT(x=768, y=448)))  

> help help:contact.html

QWindowsWindow::setGeometry: Unable to set geometry 1058x1104+1871+838 (frame:
1076x1151+1862+800) on QWidgetWindow/""QDockWidgetClassWindow"" on
""\\\\.\DISPLAY1"". Resulting geometry: 1056x1096+1872+845 (frame:
1074x1143+1863+807) margins: 9, 38, 9, 9 minimum size: 840x877 maximum size:
524287x524287 MINMAXINFO(maxSize=POINT(x=0, y=0), maxpos=POINT(x=0, y=0),
maxtrack=POINT(x=655377, y=655406), mintrack=POINT(x=1068, y=1143)))  

> open ""D:/OneDrive - UC Irvine/Gonen lab/Publications/Apo1.8 &
> ProTx-I/MOLEonline/consensus
> map/mole_channels_foioDACXdEeYMcL8jocVuA_1.json""

Opening an AlphaFold PAE file requires specifying the structure to associate.
Did not find an open structure from the same directory. To specify the
structure use menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command, for example  
  
open D:/OneDrive - UC Irvine/Gonen lab/Publications/Apo1.8 &
ProTx-I/MOLEonline/consensus map/mole_channels_foioDACXdEeYMcL8jocVuA_1.json
format pae structure #1  




OpenGL version: 3.3.0 NVIDIA 561.09
OpenGL renderer: NVIDIA GeForce RTX 4070 Laptop GPU/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Python: 3.11.4
Locale: en_US.cp1252
Qt version: PyQt6 6.6.1, Qt 6.6.1
Qt runtime version: 6.6.3
Qt platform: windows

Manufacturer: LENOVO
Model: 83DH
OS: Microsoft Windows 11 Home (Build 22631)
Memory: 33,615,630,336
MaxProcessMemory: 137,438,953,344
CPU: 16 AMD Ryzen 7 8845HS w/ Radeon 780M Graphics     
OSLanguage: en-US

Installed Packages:
    alabaster: 0.7.16
    appdirs: 1.4.4
    asttokens: 2.4.1
    Babel: 2.15.0
    beautifulsoup4: 4.12.3
    blockdiag: 3.0.0
    blosc2: 2.0.0
    build: 1.2.1
    certifi: 2024.6.2
    cftime: 1.6.4
    charset-normalizer: 3.3.2
    ChimeraX-AddCharge: 1.5.17
    ChimeraX-AddH: 2.2.6
    ChimeraX-AlignmentAlgorithms: 2.0.2
    ChimeraX-AlignmentHdrs: 3.5
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.12.7
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.1.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.57.1
    ChimeraX-AtomicLibrary: 14.0.6
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.4.6
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.12.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.7
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.4
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-ColorActions: 1.0.5
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.6
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.8
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.3
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2.4
    ChimeraX-DiffPlot: 1.0
    ChimeraX-DistMonitor: 1.4.2
    ChimeraX-DockPrep: 1.1.3
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-Label: 1.1.10
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.1.6
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.2
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.1.3
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.7.1
    ChimeraX-MedicalToolbar: 1.0.3
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.14.1
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.17
    ChimeraX-ModelPanel: 1.5
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.2
    ChimeraX-NMRSTAR: 1.0.2
    ChimeraX-NRRD: 1.2
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.13.5
    ChimeraX-PDB: 2.7.5
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1.1
    ChimeraX-PubChem: 2.2
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.4.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.2
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.2
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-Segmentations: 3.0.15
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.11.2
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.3
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.16.5
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.2.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.5
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.39.1
    ChimeraX-uniprot: 2.3
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.4.3
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.4
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.2
    comtypes: 1.4.1
    contourpy: 1.2.1
    cxservices: 1.2.2
    cycler: 0.12.1
    Cython: 3.0.10
    debugpy: 1.8.1
    decorator: 5.1.1
    docutils: 0.20.1
    executing: 2.0.1
    filelock: 3.13.4
    fonttools: 4.53.0
    funcparserlib: 2.0.0a0
    glfw: 2.7.0
    grako: 3.16.5
    h5py: 3.11.0
    html2text: 2024.2.26
    idna: 3.7
    ihm: 1.0
    imagecodecs: 2024.1.1
    imagesize: 1.4.1
    ipykernel: 6.29.2
    ipython: 8.21.0
    ipywidgets: 8.1.3
    jedi: 0.19.1
    jinja2: 3.1.4
    jupyter-client: 8.6.0
    jupyter-core: 5.7.2
    jupyterlab-widgets: 3.0.11
    kiwisolver: 1.4.5
    line-profiler: 4.1.2
    lxml: 5.2.1
    lz4: 4.3.3
    MarkupSafe: 2.1.5
    matplotlib: 3.8.4
    matplotlib-inline: 0.1.7
    msgpack: 1.0.8
    nest-asyncio: 1.6.0
    netCDF4: 1.6.5
    networkx: 3.3
    nibabel: 5.2.0
    nptyping: 2.5.0
    numexpr: 2.10.0
    numpy: 1.26.4
    openvr: 1.26.701
    packaging: 24.1
    ParmEd: 4.2.2
    parso: 0.8.4
    pep517: 0.13.1
    pillow: 10.3.0
    pip: 24.0
    pkginfo: 1.10.0
    platformdirs: 4.2.2
    prompt-toolkit: 3.0.47
    psutil: 5.9.8
    pure-eval: 0.2.2
    py-cpuinfo: 9.0.0
    pycollada: 0.8
    pydicom: 2.4.4
    pygments: 2.17.2
    pynmrstar: 3.3.4
    pynrrd: 1.0.0
    PyOpenGL: 3.1.7
    PyOpenGL-accelerate: 3.1.7
    pyopenxr: 1.0.3401
    pyparsing: 3.1.2
    pyproject-hooks: 1.1.0
    PyQt6-commercial: 6.6.1
    PyQt6-Qt6: 6.6.3
    PyQt6-sip: 13.6.0
    PyQt6-WebEngine-commercial: 6.6.0
    PyQt6-WebEngine-Qt6: 6.6.3
    python-dateutil: 2.9.0.post0
    pytz: 2024.1
    pywin32: 306
    pyzmq: 26.0.3
    qtconsole: 5.5.1
    QtPy: 2.4.1
    RandomWords: 0.4.0
    requests: 2.31.0
    scipy: 1.13.0
    setuptools: 69.5.1
    sfftk-rw: 0.8.1
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.5
    sphinx: 7.2.6
    sphinx-autodoc-typehints: 2.0.1
    sphinxcontrib-applehelp: 1.0.8
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.6
    sphinxcontrib-htmlhelp: 2.0.5
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.7
    sphinxcontrib-serializinghtml: 1.1.10
    stack-data: 0.6.3
    superqt: 0.6.3
    tables: 3.8.0
    tcia-utils: 1.5.1
    tifffile: 2024.1.30
    tinyarray: 1.2.4
    tornado: 6.4.1
    traitlets: 5.14.2
    typing-extensions: 4.12.2
    tzdata: 2024.1
    urllib3: 2.2.1
    wcwidth: 0.2.13
    webcolors: 1.13
    wheel: 0.43.0
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.11
    WMI: 1.5.1
}}}
"	defect	closed	normal		Input/Output		not a bug						all	ChimeraX