﻿id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
1595	glDrawBuffer(GL_FRONT): invalid operation	chimerax-bug-report@…	Tom Goddard	"{{{
The following bug report has been submitted:
Platform:        Windows-7-6.1.7601-SP1
ChimeraX Version: 0.8 (2018-12-17)
Description
(Describe the actions that caused this problem to occur here)

Log:
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 0.8 (2018-12-17)  
How to cite UCSF ChimeraX  

> open ""D:\Dropbox\Nanobodies_CFTR\Article1_Nbs_Stabilization\Figures\Test
Cartoon\5uak-t4.cxs"" format session

File not found:
D:\Dropbox\Nanobodies_CFTR\Article1_Nbs_Stabilization\Figures\Test
Cartoon\5uak-t4.cxs  

File not found:
D:\Dropbox\Nanobodies_CFTR\Article1_Nbs_Stabilization\Figures\Test
Cartoon\5uak-t4.cxs  

> open
D:/Dropbox/Nanobodies_CFTR/Article1_Nbs_Stabilization/Figures/Figure7/5uak-t4.cxs

Unable to restore session, resetting.  
  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\session.py"", line 593, in restore  
obj = sm.restore_snapshot(self, data)  
File ""C:\Program Files\ChimeraX\bin\lib\site-packages\chimerax\seq-
view\tool.py"", line 581, in restore_snapshot  
inst = super().restore_snapshot(session, data['ToolInstance'])  
TypeError: 'NoneType' object is not subscriptable  
  
opened ChimeraX session  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\triggerset.py"", line 130, in invoke  
return self._func(self._name, data)  
File ""C:\Program Files\ChimeraX\bin\lib\site-packages\chimerax\map\volume.py"",
line 3370, in _update_drawings  
if v.display:  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 311, in get_display  
return self._any_displayed_positions and len(self._positions) > 0  
TypeError: object of type 'NoneType' has no len()  
  
Error processing trigger ""graphics update"": object of type 'NoneType' has no
len():  
TypeError: object of type 'NoneType' has no len()  
  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 311, in get_display  
return self._any_displayed_positions and len(self._positions) > 0  
  
See log for complete Python traceback.  
  

> open 5UAK format mmCIF fromDatabase pdb

5uak title:  
Dephosphorylated, ATP-free human cystic fibrosis transmembrane conductance
regulator (CFTR) [more info...]  
  
Chain information for 5uak #1  
---  
Chain | Description  
A | Cystic fibrosis transmembrane conductance regulator  
R | Cystic fibrosis transmembrane conductance regulator  
  
Non-standard residues in 5uak #1  
---  
UNK — unknown  
  
  

> open
D:/Dropbox/Nanobodies_CFTR/Article1_Nbs_Stabilization/Figures/Figure3/forreport-
Fondation.pyc

Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-packages\chimerax\ui\gui.py"",
line 543, in _qt_safe  
run(session, ""open "" + quote_if_necessary(paths[0]))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\commands\run.py"", line 31, in run  
results = command.run(text, log=log)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\commands\cli.py"", line 2587, in run  
result = ci.function(session, **kw_args)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\commands\open.py"", line 41, in open  
from_database=from_database, ignore_cache=ignore_cache, **kw))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\commands\open.py"", line 117, in open  
models = handle_unknown_kw(session.models.open, paths, format=format,
name=name, **kw)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\commands\open.py"", line 62, in handle_unknown_kw  
return f(*args, **kw)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\models.py"", line 590, in open  
session, filenames, format=format, name=name, **kw)  
File ""C:\Program Files\ChimeraX\bin\lib\site-packages\chimerax\core\io.py"",
line 461, in open_multiple_data  
models, status = open_data(session, fspec, format=format, name=name, **kw)  
File ""C:\Program Files\ChimeraX\bin\lib\site-packages\chimerax\core\io.py"",
line 414, in open_data  
models, status = open_func(*args, **kw)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\scripting.py"", line 57, in open_python_script  
code = compile(data, file_name, 'exec')  
ValueError: source code string cannot contain null bytes  
  
ValueError: source code string cannot contain null bytes  
  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\scripting.py"", line 57, in open_python_script  
code = compile(data, file_name, 'exec')  
  
See log for complete Python traceback.  
  

> hide #!1.1 models

> help help:quickstart

> style /b stick

Changed 0 atom style  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\cmd_line\tool.py"", line 334, in <lambda>  
but.clicked.connect(lambda arg, txt=but_name: self.button_clicked(txt))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\cmd_line\tool.py"", line 421, in button_clicked  
if self.typed_only and not h[1]:  
NameError: name 'h' is not defined  
  
NameError: name 'h' is not defined  
  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\cmd_line\tool.py"", line 421, in button_clicked  
if self.typed_only and not h[1]:  
  
See log for complete Python traceback.  
  

> help sel

> help name

> name nbd1 /a:385-645

Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword  

> help color

> color nbd1 yellow

> help hide

could not retrieve bundle list from toolshed  

Unknown command: hie /r  

> hide /r

> ~ribbon /r

> name nbd2 /a:1207-1436

> color nbd2 pink

> select up

Nothing selected  

> select up

Nothing selected  

> name tmd2 /a:844-1172

> color tmd2 red

> name tmd1 /a:5-384

> color tmd1 green

> set silhouettes true

> lighting flat

> lighting flat

> lighting full

> lighting soft

> hide selAtoms surfaces

> show selAtoms surfaces

> show selAtoms surfaces

> hide selAtoms surfaces

> show selAtoms surfaces

> lighting flat

> hide /r

> select /r

95 atoms, 94 bonds selected  

> hide /r surfaces

> help color

> color nbd1 red surfaces

> hide selAtoms surfaces

> hide selAtoms surfaces

> show selAtoms ribbons

> show selAtoms ribbons

> hide selAtoms ribbons

> show selAtoms surfaces

> hide selAtoms surfaces

> hide selAtoms surfaces

> select

9232 atoms, 9423 bonds, 4 pseudobonds, 1 model selected  

> hide selAtoms surfaces

> set bgColor #ffffff

> ui mousemode rightMode translate

> ui mousemode rightMode select

> color tmd2 red

> color nbd1 yellow

> color nbd1 yellow

> open
D:/Dropbox/Nanobodies_CFTR/Article1_Nbs_Stabilization/Figures/Figure7/nbd1-T8-mono.pdb

Summary of feedback from opening
D:/Dropbox/Nanobodies_CFTR/Article1_Nbs_Stabilization/Figures/Figure7/nbd1-T8-mono.pdb  
---  
warnings | Ignored bad PDB record found on line 1  
REMARK --------------------- added by autoBUSTER
-------------------------------  
  
Ignored bad PDB record found on line 2  
REMARK run at = Fri May 18 11:38:04 CEST 2018  
  
Ignored bad PDB record found on line 9  
REMARK Files used:  
  
Ignored bad PDB record found on line 10  
REMARK PDB = ./pdbchk.pdb  
  
Ignored bad PDB record found on line 11  
REMARK MTZ = /home/crystal/2PT/D12-T8/Clean11/refine1.mtz  
  
96 messages similar to the above omitted  
Cannot find LINK/SSBOND residue CYS (22 )  
Cannot find LINK/SSBOND residue CYS (22 )  
Cannot find LINK/SSBOND residue CYS (22 )  
  
Chain information for nbd1-T8-mono.pdb #2  
---  
Chain | Description  
A | No description available  
C | No description available  
  

> help match

> matchmaker #2 to #1

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker 5uak, chain A (#1) with nbd1-T8-mono.pdb, chain A (#2), sequence
alignment score = 933.7  
RMSD between 177 pruned atom pairs is 1.043 angstroms; (across all 210 pairs:
1.879)  
  

> select #2

2486 atoms, 2477 bonds, 3 pseudobonds, 2 models selected  

> hide #!1 models

> show #!1 models

> help pivot

No help found for 'pivot'  

> cofr sel

> cofr sel

> show #1 target m

> show #1 target m

> hide #1 target m

> view #1 clip false

No displayed objects specified.  

No displayed objects specified.  

> show #!1 models

> view orient cofr false

> ui mousemode rightMode rotate selected models

> ui mousemode rightMode rotate selected models

> select #2

2486 atoms, 2477 bonds, 3 pseudobonds, 2 models selected  

> ui mousemode rightMode translate selected models

> matchmaker #2 to #1

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker 5uak, chain A (#1) with nbd1-T8-mono.pdb, chain A (#2), sequence
alignment score = 933.7  
RMSD between 177 pruned atom pairs is 1.043 angstroms; (across all 210 pairs:
1.879)  
  

> ui mousemode rightMode translate

> hide #!1 models

> show #!1 models

> select #1

9232 atoms, 9423 bonds, 4 pseudobonds, 1 model selected  

> ~select #2

9232 atoms, 9423 bonds, 4 pseudobonds, 1 model selected  

> ~select #1.3

9137 atoms, 9423 bonds, 4 pseudobonds, 1 model selected  

> ~select #1.2

9423 bonds, 4 pseudobonds, 1 model selected  

> ~select #1.1

9423 bonds selected  

> select #1

9232 atoms, 9423 bonds, 4 pseudobonds, 1 model selected  

> select #2

2486 atoms, 2477 bonds, 3 pseudobonds, 2 models selected  

> ui mousemode rightMode translate selected models

> ui mousemode rightMode translate selected models

> ui mousemode rightMode translate selected models

> ui mousemode rightMode rotate and select

> ui mousemode rightMode rotate and select

> ui mousemode rightMode rotate selected models

> matchmaker #2 to #1

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker 5uak, chain A (#1) with nbd1-T8-mono.pdb, chain A (#2), sequence
alignment score = 933.7  
RMSD between 177 pruned atom pairs is 1.043 angstroms; (across all 210 pairs:
1.879)  
  

> ui mousemode rightMode translate

> ui mousemode rightMode select

> select up

51 atoms, 51 bonds selected  

> select up

808 atoms, 826 bonds selected  

> name t8 sel

> color tmd1 blue

> color :508 red

> color tmd2 green

Unknown command: colort8 violet  

Unknown command: colort8 purple  

> color t8 purple

> show selAtoms surfaces

> select up

48 atoms, 49 bonds selected  

> select up

1586 atoms, 1613 bonds selected  

> select up

2486 atoms, 2477 bonds selected  

> select down

1586 atoms, 1613 bonds selected  

> name nbd1-t8 sel

> color nbd1 dark blue

> color tmd1 light blue

> color tmd1 cornflower blue

> show selAtoms surfaces

> select t8

Nothing selected  

> hide selAtoms surfaces

> select up

20 atoms, 20 bonds selected  

> select up

808 atoms, 826 bonds selected  

> show selAtoms surfaces

> hide selAtoms surfaces

> select #2/b

Nothing selected  

> select #2 /b

Nothing selected  

Expected an objects specifier or a keyword  

> select #2/C

808 atoms, 826 bonds, 1 pseudobond, 1 model selected  

> name t8 #2/C

> open
D:/Dropbox/Nanobodies_CFTR/Article1_Nbs_Stabilization/Figures/Figure7/colors-5UAK.cxc.txt

Unrecognized file suffix '.txt'  

Unrecognized file suffix '.txt'  

> open
D:/Dropbox/Nanobodies_CFTR/Article1_Nbs_Stabilization/Figures/Figure7/colors-5UAK.cxc

> name nbd1 /a:385-645

Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\triggerset.py"", line 130, in invoke  
return self._func(self._name, data)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\cmd_line\tool.py"", line 255, in _command_started_cb  
typed=self._just_typed_command is not None)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\cmd_line\tool.py"", line 351, in add  
self._history.enqueue((item, typed))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\history.py"", line 159, in enqueue  
self.save()  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\history.py"", line 189, in save  
self._history.save(self._queue)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\history.py"", line 109, in save  
json.dump(obj, f, ensure_ascii=False)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\safesave.py"", line 96, in __exit__  
os.replace(self._tmp_filename, self.name)  
PermissionError: [WinError 5] Access is denied:
'C:\\\Users\\\cedric\\\AppData\\\Local\\\UCSF\\\ChimeraX\\\commands.tmp' ->
'C:\\\Users\\\cedric\\\AppData\\\Local\\\UCSF\\\ChimeraX\\\commands'  
  
Error processing trigger ""command started"": [WinError 5] Access is denied:
'C:\\\Users\\\cedric\\\AppData\\\Local\\\UCSF\\\ChimeraX\\\commands.tmp' ->
'C:\\\Users\\\cedric\\\AppData\\\Local\\\UCSF\\\ChimeraX\\\commands':  
PermissionError: [WinError 5] Access is denied:
'C:\\\Users\\\cedric\\\AppData\\\Local\\\UCSF\\\ChimeraX\\\commands.tmp' ->
'C:\\\Users\\\cedric\\\AppData\\\Local\\\UCSF\\\ChimeraX\\\commands'  
  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\safesave.py"", line 96, in __exit__  
os.replace(self._tmp_filename, self.name)  
  
See log for complete Python traceback.  
  

> name nbd2 /a:1207-1436

> name tmd2 /a:844-1172

> name tmd1 /a:5-384

> name t8 #2/C

> name nbd1-t8 #2/A

> color :508 red

> color nbd1 dark blue

> color nbd1 dark blue surfaces

> color nbd2 dark green

> color nbd2 dark green surfaces

> color tmd1 cornflower blue

> color tmd1 cornflower blue surfaces

> color tmd2 sea green

> color tmd2 sea green surfaces

executed colors-5UAK.cxc  

> open t.cxc

File not found: t.cxc  

> open
D:\Dropbox\Nanobodies_CFTR\Article1_Nbs_Stabilization\Figures\Figure7\t.cxc

> name nbd1 /a:385-645

> name nbd2 /a:1207-1436

> name tmd2 /a:844-1172

> name tmd1 /a:5-384

> name t8 #2/C

> name nbd1-t8 #2/A

> color :508 red

> color nbd1 dark blue

> color nbd1 dark blue surfaces

> color nbd2 dark green

> color nbd2 dark green surfaces

> color tmd1 cornflower blue

> color tmd1 cornflower blue surfaces

> color tmd2 sea green

> color tmd2 sea green surfaces

executed t.cxc  

> select

11718 atoms, 11900 bonds, 7 pseudobonds, 3 models selected  

> show selAtoms surfaces

> lighting flat

> hide /r surfaces

> open
D:\Dropbox\Nanobodies_CFTR\Article1_Nbs_Stabilization\Figures\Figure7\colors-5UAK.cxc

> name nbd1 /a:385-645

> name nbd2 /a:1207-1436

> name tmd2 /a:844-1172

> name tmd1 /a:5-384

> name t8 #2/C

> name nbd1-t8 #2/A

> color :508 red

> color nbd1 dark blue

> color nbd1 dark blue surfaces

> color nbd2 dark green

> color nbd2 dark green surfaces

> color tmd1 cornflower blue

> color tmd1 cornflower blue surfaces

> color tmd2 sea green

> color tmd2 sea green surfaces

> hide /r surfaces

> hide /r

> show :* surfaces

> lighting flat

executed colors-5UAK.cxc  

> hide selAtoms surfaces

> open
D:\Dropbox\Nanobodies_CFTR\Article1_Nbs_Stabilization\Figures\Figure7\tata.txt

Unrecognized file suffix '.txt'  

> open
D:\Dropbox\Nanobodies_CFTR\Article1_Nbs_Stabilization\Figures\Figure7\tata.cxc

> name nbd1 /a:385-645

> name nbd2 /a:1207-1436

> name tmd2 /a:844-1172

> name tmd1 /a:5-384

> name t8 #2/C

> name nbd1-t8 #2/A

> color :508 red

> color nbd1 dark blue

> color nbd1 dark blue surfaces

> color nbd2 dark green

> color nbd2 dark green surfaces

> color tmd1 cornflower blue

> color tmd1 cornflower blue surfaces

> color tmd2 sea green

> color tmd2 sea green surfaces

> hide /r surfaces

> hide /r

> show :* surfaces

> lighting flat

executed tata.cxc  

> hide #!2 models

> open
D:\Dropbox\Nanobodies_CFTR\Article1_Nbs_Stabilization\Figures\Figure7\tata.cxc

> name nbd1 #1/a:385-645

> name nbd2 #1/a:1207-1436

> name tmd2 #1/a:844-1172

> name tmd1 #1/a:5-384

> name t8 #2/C

> name nbd1-t8 #2/A

> color :508 red

> color nbd1 dark blue

> color nbd1 dark blue surfaces

> color nbd2 dark green

> color nbd2 dark green surfaces

> color tmd1 cornflower blue

> color tmd1 cornflower blue surfaces

> color tmd2 sea green

> color tmd2 sea green surfaces

> hide #1/r surfaces

> hide #1/r

> show :* surfaces

> lighting flat

executed tata.cxc  

Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword  

> hide #1/r surfaces

> hide #1/r

> ~ribbon #1/r

> hide selAtoms surfaces

> hide selAtoms ribbons

> show selAtoms ribbons

> open
D:\Dropbox\Nanobodies_CFTR\Article1_Nbs_Stabilization\Figures\Figure7\tata.cxc

> name nbd1 #1/a:385-645

> name nbd2 #1/a:1207-1436

> name tmd2 #1/a:844-1172

> name tmd1 #1/a:5-384

> name t8 #2/C

> name nbd1-t8 #2/A

> color :508 red

> color nbd1 dark blue

> color nbd1 dark blue surfaces

> color nbd2 dark green

> color nbd2 dark green surfaces

> color tmd1 cornflower blue

> color tmd1 cornflower blue surfaces

> color tmd2 sea green

> color tmd2 sea green surfaces

> hide #1/r surfaces

> hide #1/r

> ~ribbon #1/r

> show :* surfaces

> lighting flat

executed tata.cxc  

> ~show #1/r surf

> hide selAtoms ribbons

> show selAtoms ribbons

> show selAtoms ribbons

> hide selAtoms surfaces

> open
D:\Dropbox\Nanobodies_CFTR\Article1_Nbs_Stabilization\Figures\Figure7\tata.cxc

> name nbd1 #1/a:385-645

> name nbd2 #1/a:1207-1436

> name tmd2 #1/a:844-1172

> name tmd1 #1/a:5-384

> name t8 #2/C

> name nbd1-t8 #2/A

> color :508 red

> color nbd1 dark blue

> color nbd1 dark blue surfaces

> color nbd2 dark green

> color nbd2 dark green surfaces

> color tmd1 cornflower blue

> color tmd1 cornflower blue surfaces

> color tmd2 sea green

> color tmd2 sea green surfaces

> hide #1/r surfaces

> ~show #1/r surf

> hide #1/r

> ~ribbon #1/r

> show :* surfaces

> lighting flat

executed tata.cxc  

> ~ribbon #1/r

> hide #1/r surfaces

> hide #!1 models

> show #!1 models

> hide #!2 models

> show #!2 models

> hide #!1 models

> show #!1 models

> select #2

2486 atoms, 2477 bonds, 3 pseudobonds, 2 models selected  

> ui mousemode rightMode rotate selected models

> hide selAtoms surfaces

> select

11718 atoms, 11900 bonds, 7 pseudobonds, 3 models selected  

> hide selAtoms surfaces

> hide selAtoms surfaces

Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword  

> hide :* surfaces

Expected ',' or a keyword  

> hide

> ui mousemode rightMode select

Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 437, in <lambda>  
gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e, ""mouse_drag"")  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 367, in
_dispatch_mouse_event  
f(MouseEvent(event))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 45, in mouse_drag  
self._draw_drag_rectangle(event)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 113, in _draw_drag_rectangle  
v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\view.py"", line 282, in draw_xor_rectangle  
self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 1454, in draw_xor_rectangle  
r.draw_front_buffer(True)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\opengl.py"", line 1012, in draw_front_buffer  
GL.glDrawBuffer(GL.GL_FRONT if front else GL.GL_BACK)  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 437, in <lambda>  
gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e, ""mouse_drag"")  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 367, in
_dispatch_mouse_event  
f(MouseEvent(event))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 45, in mouse_drag  
self._draw_drag_rectangle(event)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 113, in _draw_drag_rectangle  
v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\view.py"", line 282, in draw_xor_rectangle  
self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 1454, in draw_xor_rectangle  
r.draw_front_buffer(True)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\opengl.py"", line 1012, in draw_front_buffer  
GL.glDrawBuffer(GL.GL_FRONT if front else GL.GL_BACK)  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 437, in <lambda>  
gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e, ""mouse_drag"")  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 367, in
_dispatch_mouse_event  
f(MouseEvent(event))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 45, in mouse_drag  
self._draw_drag_rectangle(event)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 113, in _draw_drag_rectangle  
v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\view.py"", line 282, in draw_xor_rectangle  
self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 1454, in draw_xor_rectangle  
r.draw_front_buffer(True)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\opengl.py"", line 1012, in draw_front_buffer  
GL.glDrawBuffer(GL.GL_FRONT if front else GL.GL_BACK)  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 437, in <lambda>  
gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e, ""mouse_drag"")  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 367, in
_dispatch_mouse_event  
f(MouseEvent(event))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 45, in mouse_drag  
self._draw_drag_rectangle(event)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 113, in _draw_drag_rectangle  
v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\view.py"", line 282, in draw_xor_rectangle  
self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 1454, in draw_xor_rectangle  
r.draw_front_buffer(True)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\opengl.py"", line 1012, in draw_front_buffer  
GL.glDrawBuffer(GL.GL_FRONT if front else GL.GL_BACK)  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 437, in <lambda>  
gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e, ""mouse_drag"")  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 367, in
_dispatch_mouse_event  
f(MouseEvent(event))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 45, in mouse_drag  
self._draw_drag_rectangle(event)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 113, in _draw_drag_rectangle  
v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\view.py"", line 282, in draw_xor_rectangle  
self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 1454, in draw_xor_rectangle  
r.draw_front_buffer(True)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\opengl.py"", line 1012, in draw_front_buffer  
GL.glDrawBuffer(GL.GL_FRONT if front else GL.GL_BACK)  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 437, in <lambda>  
gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e, ""mouse_drag"")  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 367, in
_dispatch_mouse_event  
f(MouseEvent(event))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 45, in mouse_drag  
self._draw_drag_rectangle(event)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 113, in _draw_drag_rectangle  
v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\view.py"", line 282, in draw_xor_rectangle  
self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 1454, in draw_xor_rectangle  
r.draw_front_buffer(True)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\opengl.py"", line 1012, in draw_front_buffer  
GL.glDrawBuffer(GL.GL_FRONT if front else GL.GL_BACK)  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 437, in <lambda>  
gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e, ""mouse_drag"")  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 367, in
_dispatch_mouse_event  
f(MouseEvent(event))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 45, in mouse_drag  
self._draw_drag_rectangle(event)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 113, in _draw_drag_rectangle  
v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\view.py"", line 282, in draw_xor_rectangle  
self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 1454, in draw_xor_rectangle  
r.draw_front_buffer(True)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\opengl.py"", line 1012, in draw_front_buffer  
GL.glDrawBuffer(GL.GL_FRONT if front else GL.GL_BACK)  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 437, in <lambda>  
gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e, ""mouse_drag"")  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 367, in
_dispatch_mouse_event  
f(MouseEvent(event))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 45, in mouse_drag  
self._draw_drag_rectangle(event)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 113, in _draw_drag_rectangle  
v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\view.py"", line 282, in draw_xor_rectangle  
self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 1454, in draw_xor_rectangle  
r.draw_front_buffer(True)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\opengl.py"", line 1012, in draw_front_buffer  
GL.glDrawBuffer(GL.GL_FRONT if front else GL.GL_BACK)  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 437, in <lambda>  
gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e, ""mouse_drag"")  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 367, in
_dispatch_mouse_event  
f(MouseEvent(event))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 45, in mouse_drag  
self._draw_drag_rectangle(event)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 113, in _draw_drag_rectangle  
v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\view.py"", line 282, in draw_xor_rectangle  
self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 1454, in draw_xor_rectangle  
r.draw_front_buffer(True)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\opengl.py"", line 1012, in draw_front_buffer  
GL.glDrawBuffer(GL.GL_FRONT if front else GL.GL_BACK)  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 437, in <lambda>  
gw.mouseMoveEvent = lambda e, s=self: s._dispatch_mouse_event(e, ""mouse_drag"")  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\mousemodes.py"", line 367, in
_dispatch_mouse_event  
f(MouseEvent(event))  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 45, in mouse_drag  
self._draw_drag_rectangle(event)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\mouse_modes\std_modes.py"", line 113, in _draw_drag_rectangle  
v.draw_xor_rectangle(dx, h-dy, x, h-y, self.drag_color)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\view.py"", line 282, in draw_xor_rectangle  
self._rectangle_drawing = draw_xor_rectangle(self._render, x1, y1, x2, y2,
color, d)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\drawing.py"", line 1454, in draw_xor_rectangle  
r.draw_front_buffer(True)  
File ""C:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\graphics\opengl.py"", line 1012, in draw_front_buffer  
GL.glDrawBuffer(GL.GL_FRONT if front else GL.GL_BACK)  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1282,  
description = b'invalid operation',  
baseOperation = glDrawBuffer,  
cArguments = (GL_FRONT,)  
)  
  
File ""zr\accelerate\src\errorchecker.pyx"", line 53, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError
(src\errorchecker.c:1270)  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0
OpenGL renderer: GeForce GTX 660/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

}}}
"	defect	closed	normal		Graphics		duplicate						all	ChimeraX
