id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 15602 Crashed in QTabBar::paintEvent(), QPainter::begin: Paint device returned engine == 0 chimerax-bug-report@… Eric Pettersen "{{{ The following bug report has been submitted: Platform: macOS-10.16-x86_64-i386-64bit ChimeraX Version: 1.6.1 (2023-05-09 17:57:07 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. 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400000006 } ] }, ""reportNotes"" : [ ""PC register does not match crashing frame (0x0 vs 0x7FF89B7D2A78)"" ] } ===== Log before crash start ===== Startup Messages --- warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR bundle with that from NMRSTAR bundle UCSF ChimeraX version: 1.6.1 (2023-05-09) © 2016-2023 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_001.mrc Opened vol_001.mrc as #1, grid size 112,112,112, pixel 5, shown at level 0.0824, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_002.mrc Opened vol_002.mrc as #2, grid size 112,112,112, pixel 5, shown at level 0.0611, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_003.mrc Opened vol_003.mrc as #3, grid size 112,112,112, pixel 5, shown at level 0.052, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_004.mrc Opened vol_004.mrc as #4, grid size 112,112,112, pixel 5, shown at level 0.114, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_005.mrc Opened vol_005.mrc as #5, grid size 112,112,112, pixel 5, shown at level 0.0777, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_006.mrc Opened vol_006.mrc as #6, grid size 112,112,112, pixel 5, shown at level 0.0809, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_007.mrc Opened vol_007.mrc as #7, grid size 112,112,112, pixel 5, shown at level 0.108, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_008.mrc Opened vol_008.mrc as #8, grid size 112,112,112, pixel 5, shown at level 0.08, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_009.mrc Opened vol_009.mrc as #9, grid size 112,112,112, pixel 5, shown at level 0.0708, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_010.mrc Opened vol_010.mrc as #10, grid size 112,112,112, pixel 5, shown at level 0.0923, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_011.mrc Opened vol_011.mrc as #11, grid size 112,112,112, pixel 5, shown at level 0.0648, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_012.mrc Opened vol_012.mrc as #12, grid size 112,112,112, pixel 5, shown at level 0.0717, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_013.mrc Opened vol_013.mrc as #13, grid size 112,112,112, pixel 5, shown at level 0.0491, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_014.mrc Opened vol_014.mrc as #14, grid size 112,112,112, pixel 5, shown at level 0.0655, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_015.mrc Opened vol_015.mrc as #15, grid size 112,112,112, pixel 5, shown at level 0.0618, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_016.mrc Opened vol_016.mrc as #16, grid size 112,112,112, pixel 5, shown at level 0.0956, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_017.mrc Opened vol_017.mrc as #17, grid size 112,112,112, pixel 5, shown at level 0.108, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_000.mrc Opened vol_000.mrc as #18, grid size 112,112,112, pixel 5, shown at level 0.0616, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_018.mrc Opened vol_018.mrc as #19, grid size 112,112,112, pixel 5, shown at level 0.0803, step 1, values float32 > open /Users/bertram/Downloads/cryodrgn_files_for_bertram/vol_019.mrc Opened vol_019.mrc as #20, grid size 112,112,112, pixel 5, shown at level 0.0803, step 1, values float32 > lighting simple > lighting soft > lighting full > lighting soft > volume #1 level 0.04806 > volume #1 level 0.01833 > volume #1 level 0.03891 > volume #1 level 0.05035 > ui tool show ""Side View"" > volume #2 level 0.01934 > close #2 > volume #3 level 0.02944 > volume #3 level 0.05204 > close #3 > volume #4 level 0.05913 > volume #4 level 0.06255 > volume #5 level 0.04543 > ui tool show ""Fit in Map"" > fitmap #1 inMap #4 Fit map vol_001.mrc in map vol_004.mrc using 37705 points correlation = 0.9496, correlation about mean = 0.5604, overlap = 308.1 steps = 44, shift = 1.08, angle = 0.212 degrees Position of vol_001.mrc (#1) relative to vol_004.mrc (#4) coordinates: Matrix rotation and translation 0.99999647 -0.00250386 0.00089334 1.43255052 0.00250616 0.99999352 -0.00258348 0.19515621 -0.00088686 0.00258571 0.99999626 -0.78055093 Axis 0.69707748 0.24006381 0.67561258 Axis point 0.00000000 437.28093584 26.30050845 Rotation angle (degrees) 0.21243969 Shift along axis 0.51809863 > fitmap #1 inMap #4 Fit map vol_001.mrc in map vol_004.mrc using 37705 points correlation = 0.9497, correlation about mean = 0.5597, overlap = 308 steps = 44, shift = 0.048, angle = 0.0178 degrees Position of vol_001.mrc (#1) relative to vol_004.mrc (#4) coordinates: Matrix rotation and translation 0.99999575 -0.00269244 0.00111889 1.43640818 0.00269543 0.99999277 -0.00268230 0.14521399 -0.00111166 0.00268530 0.99999578 -0.78298205 Axis 0.67724609 0.28143386 0.67980344 Axis point -2.50463217 412.41253884 0.00000000 Rotation angle (degrees) 0.22705312 Shift along axis 0.48139606 > fitmap #1 inMap #4 Fit map vol_001.mrc in map vol_004.mrc using 37705 points correlation = 0.9497, correlation about mean = 0.5599, overlap = 307.9 steps = 40, shift = 0.0241, angle = 0.00273 degrees Position of vol_001.mrc (#1) relative to vol_004.mrc (#4) coordinates: Matrix rotation and translation 0.99999576 -0.00270088 0.00108423 1.45470522 0.00270375 0.99999283 -0.00265065 0.15700181 -0.00107707 0.00265357 0.99999590 -0.77936958 Axis 0.67355035 0.27444984 0.68629965 Axis point -7.42484111 416.91117862 0.00000000 Rotation angle (degrees) 0.22560340 Shift along axis 0.48802526 > fitmap #1 inMap #4 Fit map vol_001.mrc in map vol_004.mrc using 37705 points correlation = 0.9497, correlation about mean = 0.561, overlap = 308.1 steps = 44, shift = 0.11, angle = 0.0382 degrees Position of vol_001.mrc (#1) relative to vol_004.mrc (#4) coordinates: Matrix rotation and translation 0.99999730 -0.00224416 0.00059813 1.36510009 0.00224574 0.99999397 -0.00264715 0.29579871 -0.00059218 0.00264849 0.99999632 -0.93777859 Axis 0.75178043 0.16897887 0.63739495 Axis point 0.00000000 469.35028505 80.12893187 Rotation angle (degrees) 0.20180008 Shift along axis 0.47850392 > hide #!4 models > hide #!5 models > show #!5 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!5 models > show #!4 models > hide #!4 models > volume #1 level 0.0412 > show #!4 models > hide #!4 models > show #!4 models > hide #!4 models > show #!4 models > hide #!4 models > hide #!1 models > show #!4 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!4 models > volume #1 level 0.04349 > hide #!1 models > show #!4 models > show #!5 models > hide #!5 models > show #!5 models > hide #!5 models > show #!5 models > hide #!5 models > show #!5 models > hide #!5 models > show #!5 models > hide #!5 models > show #!5 models > hide #!5 models > show #!5 models > hide #!4 models > show #!6 models > volume #5 level 0.04791 > volume #6 level 0.02509 > volume #6 level 0.02907 > volume #6 level 0.03306 > volume #6 level 0.04501 > hide #!6 models > show #!6 models > hide #!6 models > show #!7 models > show #!6 models > hide #!5 models > hide #!6 models > volume #7 level 0.07138 > show #!6 models > hide #!6 models > volume #7 level 0.0614 > show #!6 models > hide #!6 models > show #!6 models > hide #!6 models > show #!6 models > hide #!7 models > show #!7 models > hide #!6 models > volume #7 level 0.06806 > volume #7 level 0.08803 > hide #!7 models > show #!8 models > volume #8 level 0.01754 > volume #8 level 0.04299 > hide #!8 models > show #!9 models > volume #9 level 0.03329 > volume #10 level 0.03908 > volume #11 level 0.02553 > volume #11 level 0.01243 > volume #11 level 0.02225 > volume #11 level 0.03208 > volume #11 level 0.02553 > volume #11 level 0.02881 > hide #!11 models > show #!12 models > volume #10 level 0.03797 > volume #10 level 0.03575 > volume #10 level 0.03464 > volume #10 level 0.03353 > volume #10 level 0.03242 > volume #10 level 0.03132 > volume #10 level 0.03021 > volume #10 level 0.03132 > volume #10 level 0.03242 > volume #10 level 0.03464 > volume #10 level 0.03575 > volume #10 level 0.03686 > volume #10 level 0.03797 > volume #10 level 0.03908 > volume #10 level 0.04018 > volume #10 level 0.04129 > volume #10 level 0.0424 > volume #10 level 0.04351 > volume #10 level 0.04462 > volume #10 level 0.04573 > volume #10 level 0.04684 > volume #10 level 0.04794 > volume #10 level 0.04905 > volume #10 level 0.05016 > volume #10 level 0.05349 > volume #10 level 0.0546 > volume #10 level 0.0557 > volume #10 level 0.05681 > hide #!10 models > volume #12 level 0.0468 > volume #12 level 0.03641 > volume #12 level 0.04992 > volume #13 level 0.01692 > volume #14 level 0.02229 > volume #14 level 0.01896 > volume #14 level 0.01398 > volume #14 level 0.04058 > volume #15 level 0.06177 > volume #15 level 0.01858 > volume #16 level 0.02583 > volume #16 level 0.06642 > volume #16 level 0.0583 > volume #17 level 0.05688 > volume #16 level 0.05181 > volume #18 level 0.04541 > close #18 > volume #19 level 0.0234 > volume #19 level 0.009752 > volume #19 level 0.05296 > volume #20 level 0.03228 > volume #20 level 0.01726 > volume #20 level 0.06232 QPainter::begin: Paint device returned engine == 0, type: 3 ===== Log before crash end ===== Log: Startup Messages --- warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR bundle with that from NMRSTAR bundle UCSF ChimeraX version: 1.6.1 (2023-05-09) © 2016-2023 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 Metal - 88.1 OpenGL renderer: Apple M2 Pro OpenGL vendor: Apple Python: 3.9.11 Locale: UTF-8 Qt version: PyQt6 6.4.2, Qt 6.4.2 Qt runtime version: 6.4.3 Qt platform: cocoa Hardware: Hardware Overview: Model Name: Mac Model Identifier: Mac14,9 Model Number: MPHF3B/A Chip: Unknown Total Number of Cores: 12 (8 performance and 4 efficiency) Memory: 16 GB System Firmware Version: 10151.121.1 OS Loader Version: 10151.121.1 Software: System Software Overview: System Version: macOS 14.5 (23F79) Kernel Version: Darwin 23.5.0 Time since boot: 3 days, 22 hours, 18 minutes Graphics/Displays: Apple M2 Pro: Chipset Model: Apple M2 Pro Type: GPU Bus: Built-In Total Number of Cores: 19 Vendor: Apple (0x106b) Metal Support: Metal 3 Displays: Color LCD: Display Type: Built-in Liquid Retina XDR Display Resolution: 3024 x 1964 Retina Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: No Connection Type: Internal DELL U3419W: Resolution: 3440 x 1440 (UWQHD - Ultra-Wide Quad HD) UI Looks like: 3440 x 1440 @ 60.00Hz Mirror: Off Online: Yes Installed Packages: alabaster: 0.7.13 appdirs: 1.4.4 appnope: 0.1.3 asttokens: 2.2.1 Babel: 2.12.1 backcall: 0.2.0 beautifulsoup4: 4.11.2 blockdiag: 3.0.0 build: 0.10.0 certifi: 2021.10.8 cftime: 1.6.2 charset-normalizer: 3.1.0 ChimeraX-AddCharge: 1.5.9.1 ChimeraX-AddH: 2.2.5 ChimeraX-AlignmentAlgorithms: 2.0.1 ChimeraX-AlignmentHdrs: 3.3.1 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.9.3 ChimeraX-AlphaFold: 1.0 ChimeraX-AltlocExplorer: 1.0.3 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.43.10 ChimeraX-AtomicLibrary: 10.0.6 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.3.2 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.1.2 ChimeraX-BondRot: 2.0.1 ChimeraX-BugReporter: 1.0.1 ChimeraX-BuildStructure: 2.8 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.2.2 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.3.2 ChimeraX-ChangeChains: 1.0.2 ChimeraX-CheckWaters: 1.3.1 ChimeraX-ChemGroup: 2.0.1 ChimeraX-Clashes: 2.2.4 ChimeraX-ColorActions: 1.0.3 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.3 ChimeraX-CommandLine: 1.2.5 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.6.1 ChimeraX-CoreFormats: 1.1 ChimeraX-coulombic: 1.4.2 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.3 ChimeraX-Dicom: 1.2 ChimeraX-DistMonitor: 1.4 ChimeraX-DockPrep: 1.1.1 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1.1 ChimeraX-Hbonds: 2.4 ChimeraX-Help: 1.2.1 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-Label: 1.1.7 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.5 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.2 ChimeraX-Map: 1.1.4 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.0.12 ChimeraX-MDcrds: 2.6 ChimeraX-MedicalToolbar: 1.0.2 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.12 ChimeraX-MMTF: 2.2 ChimeraX-Modeller: 1.5.9 ChimeraX-ModelPanel: 1.3.7 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.0 ChimeraX-NRRD: 1.0 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.10.1 ChimeraX-PDB: 2.7.2 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.2 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1 ChimeraX-PubChem: 2.1 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.1 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 3.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.1 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.8.3 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.1.1 ChimeraX-ShowSequences: 1.0.1 ChimeraX-SideView: 1.0.1 ChimeraX-Smiles: 2.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.10.3 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.1.2 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.2.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.1.2 ChimeraX-ToolshedUtils: 1.2.1 ChimeraX-Topography: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.28.4 ChimeraX-uniprot: 2.2.2 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.2 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.1 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.1.3 contourpy: 1.0.7 cxservices: 1.2.2 cycler: 0.11.0 Cython: 0.29.33 debugpy: 1.6.7 decorator: 5.1.1 docutils: 0.19 executing: 1.2.0 filelock: 3.9.0 fonttools: 4.39.3 funcparserlib: 1.0.1 grako: 3.16.5 h5py: 3.8.0 html2text: 2020.1.16 idna: 3.4 ihm: 0.35 imagecodecs: 2022.9.26 imagesize: 1.4.1 importlib-metadata: 6.6.0 ipykernel: 6.21.1 ipython: 8.10.0 ipython-genutils: 0.2.0 ipywidgets: 8.0.6 jedi: 0.18.2 Jinja2: 3.1.2 jupyter-client: 8.0.2 jupyter-core: 5.3.0 jupyterlab-widgets: 3.0.7 kiwisolver: 1.4.4 line-profiler: 4.0.2 lxml: 4.9.2 lz4: 4.3.2 MarkupSafe: 2.1.2 matplotlib: 3.6.3 matplotlib-inline: 0.1.6 msgpack: 1.0.4 nest-asyncio: 1.5.6 netCDF4: 1.6.2 networkx: 2.8.8 nibabel: 5.0.1 nptyping: 2.5.0 numexpr: 2.8.4 numpy: 1.23.5 openvr: 1.23.701 packaging: 21.3 ParmEd: 3.4.3 parso: 0.8.3 pep517: 0.13.0 pexpect: 4.8.0 pickleshare: 0.7.5 Pillow: 9.3.0 pip: 23.0 pkginfo: 1.9.6 platformdirs: 3.5.0 prompt-toolkit: 3.0.38 psutil: 5.9.4 ptyprocess: 0.7.0 pure-eval: 0.2.2 pycollada: 0.7.2 pydicom: 2.3.0 Pygments: 2.14.0 pynrrd: 1.0.0 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 3.0.9 pyproject-hooks: 1.0.0 PyQt6-commercial: 6.4.2 PyQt6-Qt6: 6.4.3 PyQt6-sip: 13.4.1 PyQt6-WebEngine-commercial: 6.4.0 PyQt6-WebEngine-Qt6: 6.4.3 python-dateutil: 2.8.2 pytz: 2023.3 pyzmq: 25.0.2 qtconsole: 5.4.0 QtPy: 2.3.1 RandomWords: 0.4.0 requests: 2.28.2 scipy: 1.9.3 setuptools: 67.4.0 setuptools-scm: 7.0.5 sfftk-rw: 0.7.3 six: 1.16.0 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.4.1 sphinx: 6.1.3 sphinx-autodoc-typehints: 1.22 sphinxcontrib-applehelp: 1.0.4 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.1 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 stack-data: 0.6.2 tables: 3.7.0 tcia-utils: 1.2.0 tifffile: 2022.10.10 tinyarray: 1.2.4 tomli: 2.0.1 tornado: 6.3.1 traitlets: 5.9.0 typing-extensions: 4.5.0 tzdata: 2023.3 urllib3: 1.26.15 wcwidth: 0.2.6 webcolors: 1.12 wheel: 0.38.4 wheel-filename: 1.4.1 widgetsnbextension: 4.0.7 zipp: 3.15.0 }}} " defect closed normal Window Toolkit duplicate all ChimeraX