id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 15569 lookingglass errors chimerax-bug-report@… Tom Goddard "{{{ The following bug report has been submitted: Platform: Windows-10-10.0.22631 ChimeraX Version: 1.9.dev202407052353 (2024-07-05 23:53:33 UTC) Description (Describe the actions that caused this problem to occur here) Log: Startup Messages --- note | available bundle cache has not been initialized yet You can double click a model's Name or ID in the model panel to edit those fields UCSF ChimeraX version: 1.9.dev202407052353 (2024-07-05) © 2016-2024 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > help help:quickstart > open ""C:/Users/联想/Desktop/Predicted Rep > structure/fold_2024_07_06_17_52_rep_ptm/fold_2024_07_06_17_52_rep_ptm_model_1.cif"" Chain information for fold_2024_07_06_17_52_rep_ptm_model_1.cif #1 --- Chain | Description A | . > select /A:1-357 2878 atoms, 2956 bonds, 357 residues, 1 model selected > hide sel cartoons [Repeated 3 time(s)] > show sel cartoons > select protein 2878 atoms, 2956 bonds, 357 residues, 1 model selected > select nucleic-acid Nothing selected > color bynucleotide [Repeated 2 time(s)] > show target m > nucleotides atoms > style nucleic stick Changed 0 atom styles > nucleotides fill > style nucleic stick Changed 0 atom styles > nucleotides tube/slab shape muffler > ui mousemode right label > ui mousemode right distance > select /A:1-357 2878 atoms, 2956 bonds, 357 residues, 1 model selected > select /A:1-357 2878 atoms, 2956 bonds, 357 residues, 1 model selected > close > open ""C:\Users\联想\Desktop\Predicted Rep > structure\fold_2024_07_06_17_52_rep_ptm\fold_2024_07_06_17_52_rep_ptm_model_1.cif"" > format mmcif Chain information for fold_2024_07_06_17_52_rep_ptm_model_1.cif #1 --- Chain | Description A | . > open ""C:\Users\联想\Desktop\Predicted Rep > structure\fold_2024_07_06_17_52_rep_ptm\fold_2024_07_06_17_52_rep_ptm_model_1.cif"" > format mmcif Chain information for fold_2024_07_06_17_52_rep_ptm_model_1.cif #2 --- Chain | Description A | . > lookingglass Failed to initialize HoloPlay: Interprocess pipe broken Did not find any connected LookingGlass display Traceback (most recent call last): File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\looking_glass\lookingglass.py"", line 421, in event self._render() File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\looking_glass\lookingglass.py"", line 433, in _render mvwin = r.use_shared_context(self) ^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 579, in use_shared_context self.make_current() File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 550, in make_current return self._opengl_context.make_current() ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 123, in make_current raise OpenGLError(""Could not make graphics context current"") chimerax.graphics.opengl.OpenGLError: Could not make graphics context current chimerax.graphics.opengl.OpenGLError: Could not make graphics context current File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 123, in make_current raise OpenGLError(""Could not make graphics context current"") See log for complete Python traceback. Traceback (most recent call last): File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\looking_glass\lookingglass.py"", line 421, in event self._render() File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\looking_glass\lookingglass.py"", line 433, in _render mvwin = r.use_shared_context(self) ^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 579, in use_shared_context self.make_current() File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 550, in make_current return self._opengl_context.make_current() ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 123, in make_current raise OpenGLError(""Could not make graphics context current"") chimerax.graphics.opengl.OpenGLError: Could not make graphics context current chimerax.graphics.opengl.OpenGLError: Could not make graphics context current File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 123, in make_current raise OpenGLError(""Could not make graphics context current"") See log for complete Python traceback. Traceback (most recent call last): File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\core\triggerset.py"", line 149, in invoke return self._func(self._name, data) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\looking_glass\lookingglass.py"", line 425, in _frame_drawn self._render() File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\looking_glass\lookingglass.py"", line 433, in _render mvwin = r.use_shared_context(self) ^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 579, in use_shared_context self.make_current() File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 550, in make_current return self._opengl_context.make_current() ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 123, in make_current raise OpenGLError(""Could not make graphics context current"") chimerax.graphics.opengl.OpenGLError: Could not make graphics context current Error processing trigger ""frame drawn"": chimerax.graphics.opengl.OpenGLError: Could not make graphics context current File ""D:\APPs\ChimeraX 1.9.dev202407052353\bin\Lib\site- packages\chimerax\graphics\opengl.py"", line 123, in make_current raise OpenGLError(""Could not make graphics context current"") See log for complete Python traceback. OpenGL version: 3.3.0 - Build 31.0.101.5328 OpenGL renderer: Intel(R) Arc(TM) Graphics OpenGL vendor: Intel Python: 3.11.4 Locale: zh_CN.cp936 Qt version: PyQt6 6.7.0, Qt 6.7.1 Qt runtime version: 6.7.2 Qt platform: windows Manufacturer: LENOVO Model: 83D2 OS: Microsoft Windows 11 家庭中文版 (Build 22631) Memory: 33,945,935,872 MaxProcessMemory: 137,438,953,344 CPU: 18 Intel(R) Core(TM) Ultra 5 125H OSLanguage: zh-CN Installed Packages: alabaster: 0.7.16 appdirs: 1.4.4 asttokens: 2.4.1 Babel: 2.15.0 beautifulsoup4: 4.12.3 blockdiag: 3.0.0 blosc2: 2.0.0 build: 1.2.1 certifi: 2024.7.4 cftime: 1.6.4 charset-normalizer: 3.3.2 ChimeraX-AddCharge: 1.5.17 ChimeraX-AddH: 2.2.6 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.5 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.13 ChimeraX-AlphaFold: 1.0.1 ChimeraX-AltlocExplorer: 1.1.1 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.58.3 ChimeraX-AtomicLibrary: 14.1.1 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.4.6 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.1 ChimeraX-BuildStructure: 2.13 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.2.7 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.4 ChimeraX-ChemGroup: 2.0.1 ChimeraX-Clashes: 2.2.4 ChimeraX-ColorActions: 1.0.5 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.6 ChimeraX-CommandLine: 1.2.5 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.9.dev202407052353 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.4 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.3 ChimeraX-DeepMutationalScan: 1.0 ChimeraX-Dicom: 1.2.4 ChimeraX-DiffPlot: 1.0 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.1.3 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-Foldseek: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1.1 ChimeraX-Hbonds: 2.4 ChimeraX-Help: 1.3 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-Label: 1.1.10 ChimeraX-ListInfo: 1.2.2 ChimeraX-Log: 1.1.7 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.1 ChimeraX-Map: 1.2 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.1.4 ChimeraX-MCopy: 1.0 ChimeraX-MDcrds: 2.7.1 ChimeraX-MedicalToolbar: 1.0.3 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.14.1 ChimeraX-MMTF: 2.2 ChimeraX-Modeller: 1.5.17 ChimeraX-ModelPanel: 1.5 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.2 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.13.5 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.6 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.4 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.2 ChimeraX-PubChem: 2.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.4.1 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.2 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.2 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.1.5 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.12.1 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.1.1 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.16.6 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.39.5 ChimeraX-uniprot: 2.3.1 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.4.3 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.4 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.2.2 comtypes: 1.4.1 contourpy: 1.2.1 cxservices: 1.2.2 cycler: 0.12.1 Cython: 3.0.10 debugpy: 1.8.2 decorator: 5.1.1 docutils: 0.20.1 executing: 2.0.1 filelock: 3.13.4 fonttools: 4.53.1 funcparserlib: 2.0.0a0 glfw: 2.7.0 grako: 3.16.5 h5py: 3.11.0 html2text: 2024.2.26 idna: 3.7 ihm: 1.0 imagecodecs: 2024.1.1 imagesize: 1.4.1 ipykernel: 6.29.2 ipython: 8.21.0 ipywidgets: 8.1.3 jedi: 0.19.1 Jinja2: 3.1.4 jupyter_client: 8.6.0 jupyter_core: 5.7.2 jupyterlab_widgets: 3.0.11 kiwisolver: 1.4.5 line-profiler: 4.1.2 lxml: 5.2.1 lz4: 4.3.3 MarkupSafe: 2.1.5 matplotlib: 3.8.4 matplotlib-inline: 0.1.7 msgpack: 1.0.8 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.3 nibabel: 5.2.0 nptyping: 2.5.0 numexpr: 2.10.1 numpy: 1.26.4 openvr: 1.26.701 packaging: 24.1 ParmEd: 4.2.2 parso: 0.8.4 pep517: 0.13.1 pillow: 10.3.0 pip: 24.0 pkginfo: 1.10.0 platformdirs: 4.2.2 prompt_toolkit: 3.0.47 psutil: 5.9.8 pure-eval: 0.2.2 py-cpuinfo: 9.0.0 pycollada: 0.8 pydicom: 2.4.4 Pygments: 2.17.2 pynmrstar: 3.3.4 pynrrd: 1.0.0 PyOpenGL: 3.1.7 PyOpenGL-accelerate: 3.1.7 pyopenxr: 1.0.3401 pyparsing: 3.1.2 pyproject_hooks: 1.1.0 PyQt6-commercial: 6.7.0 PyQt6-Qt6: 6.7.2 PyQt6-sip: 13.6.0 PyQt6-WebEngine-commercial: 6.7.0 PyQt6-WebEngine-Qt6: 6.7.2 PyQt6-WebEngineSubwheel-Qt6: 6.7.2 python-dateutil: 2.9.0.post0 pytz: 2024.1 pywin32: 306 pyzmq: 26.0.3 qtconsole: 5.5.1 QtPy: 2.4.1 RandomWords: 0.4.0 requests: 2.32.3 scipy: 1.13.0 setuptools: 69.5.1 sfftk-rw: 0.8.1 six: 1.16.0 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.5 Sphinx: 7.2.6 sphinx-autodoc-typehints: 2.0.1 sphinxcontrib-applehelp: 1.0.8 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 1.0.6 sphinxcontrib-htmlhelp: 2.0.5 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.7 sphinxcontrib-serializinghtml: 1.1.10 stack-data: 0.6.3 superqt: 0.6.3 tables: 3.8.0 tcia_utils: 1.5.1 tifffile: 2024.1.30 tinyarray: 1.2.4 tornado: 6.4.1 traitlets: 5.14.2 typing_extensions: 4.12.2 tzdata: 2024.1 urllib3: 2.2.2 wcwidth: 0.2.13 webcolors: 1.13 wheel: 0.43.0 wheel-filename: 1.4.1 widgetsnbextension: 4.0.11 WMI: 1.5.1 }}} " defect closed normal General Controls can't reproduce all ChimeraX