id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
1512	No suitable models found for ViewDockX	chimerax-bug-report@…	Conrad Huang	"{{{
The following bug report has been submitted:
Platform:        Darwin-17.5.0-x86_64-i386-64bit
ChimeraX Version: 0.8 (2018-10-11)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 0.8 (2018-10-11)  
How to cite UCSF ChimeraX  

open /Users/dni/Desktop/old_des/map/apo_F.mrc ↵

Opened apo_F.mrc, grid size 485,485,485, pixel 0.5, shown at level 2.59, step
2, values float32  

set bgColor gray ↵

set bgColor black ↵

toolshed show ""Side View""

set bgColor white ↵

lighting full ↵

lighting flat ↵

set silhouettes false ↵

lighting flat ↵

toolshed show ViewDockX

Traceback (most recent call last):  
  File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/toolshed/info.py"", line 571, in start_tool  
    ti = api._api_caller.start_tool(api, session, self, tool_info)  
  File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/toolshed/__init__.py"", line 1233, in start_tool  
    return cls._get_func(api, ""start_tool"")(session, bi, ti)  
  File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/atomic/viewdockx/__init__.py"", line 15, in start_tool  
    tool.setup()  
  File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/atomic/viewdockx/tool.py"", line 22, in setup  
    self._setup(structures)  
  File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/atomic/viewdockx/tool.py"", line 53, in _setup  
    raise ValueError(""No suitable models found for ViewDockX"")  
ValueError: No suitable models found for ViewDockX  
  
During handling of the above exception, another exception occurred:  
  
Traceback (most recent call last):  
  File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/ui/gui.py"", line 1003, in <lambda>  
    run(ses, ""toolshed show %s"" % quote_if_necessary(tool_name)))  
  File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/commands/run.py"", line 31, in run  
    results = command.run(text, log=log)  
  File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/commands/cli.py"", line 2562, in run  
    result = ci.function(session, **kw_args)  
  File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/commands/toolshed.py"", line 337, in toolshed_show  
    bi.start_tool(session, tool_name)  
  File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/toolshed/info.py"", line 577, in start_tool  
    ""start_tool() failed for tool %s in bundle %s:\n%s"" % (tool_name,
self.name, str(e)))  
chimerax.core.toolshed.ToolshedError: start_tool() failed for tool ViewDockX
in bundle ChimeraX-ViewDockX:  
No suitable models found for ViewDockX  
  
chimerax.core.toolshed.ToolshedError: start_tool() failed for tool ViewDockX
in bundle ChimeraX-ViewDockX:  
No suitable models found for ViewDockX  
  
File
""/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-
packages/chimerax/core/toolshed/info.py"", line 577, in start_tool  
""start_tool() failed for tool %s in bundle %s:\n%s"" % (tool_name, self.name,
str(e)))  
  
See log for complete Python traceback.  
  




OpenGL version: 4.1 INTEL-10.32.48
OpenGL renderer: Intel(R) Iris(TM) Graphics 650
OpenGL vendor: Intel Inc.

}}}
"	enhancement	closed	normal	1.0	Surface/Binding Analysis		fixed						all	ChimeraX