id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
15043	Crashed in garbage collection	haaris.safdari@…	Eric Pettersen	"{{{
The following bug report has been submitted:
Platform:        macOS-14.4.1-x86_64-i386-64bit
ChimeraX Version: 1.7.1 (2024-01-23 01:58:08 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
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Log:
Startup Messages  
---  
warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
bundle with that from NMRSTAR bundle  
  

> mousemode shift leftMode ""translate selected models""

> mousemode shift middleMode ""rotate selected models""

> mousemode rightMode zoom

> mousemode control wheelMode ""contour level""

> mousemode setting ""contour level"" speed 0.1

> mousemode shift wheelMode ""rotate selected models""

> camera ortho

> set bgColor grey

> lighting shadows false

> lighting depthCue false

> graphics silhouettes true

> lighting simple

> functionkey F1 cofr sel

> functionkey F2 mousemode rightMode 'mark surface'

> functionkey F3 mousemode rightMode 'move markers'

> functionkey F4 mk 3 1

> functionkey F5 view

> functionkey F6 view sel pad 0.92 clip false

> functionkey F7 mousemode rightMode 'delete markers'

> functionkey F8 mousemode rightMode zoom

> functionkey F9 sequence chain sel

> functionkey F10 transparency sel 65

> functionkey F11 transparency sel 0

> functionkey F12 tool show 'Fit in Map'

> color name f01graublau #BADBED

Color 'f01graublau' is opaque: rgb(72.9%, 85.9%, 92.9%) hex: #badbed

  

> color name f02silber #F6FAFC

Color 'f02silber' is opaque: rgb(96.5%, 98%, 98.8%) hex: #f6fafc

  

> color name f03muschel #FFFFE5

Color 'f03muschel' is opaque: rgb(100%, 100%, 89.8%) hex: #ffffe5

  

> color name f04beige #F3F3A9

Color 'f04beige' is opaque: rgb(95.3%, 95.3%, 66.3%) hex: #f3f3a9

  

> color name f05gelb #f2b701

Color 'f05gelb' is opaque: rgb(94.9%, 71.8%, 0.392%) hex: #f2b701

  

> color name f06orange #e68310

Color 'f06orange' is opaque: rgb(90.2%, 51.4%, 6.27%) hex: #e68310

  

> color name f07rotorange #FF6A25

Color 'f07rotorange' is opaque: rgb(100%, 41.6%, 14.5%) hex: #ff6a25

  

> color name f08rot #dd3d2d

Color 'f08rot' is opaque: rgb(86.7%, 23.9%, 17.6%) hex: #dd3d2d

  

> color name f09lachs #f97b72

Color 'f09lachs' is opaque: rgb(97.6%, 48.2%, 44.7%) hex: #f97b72

  

> color name f10flieder #D57AD5

Color 'f10flieder' is opaque: rgb(83.5%, 47.8%, 83.5%) hex: #d57ad5

  

> color name f11violett #cf1c90

Color 'f11violett' is opaque: rgb(81.2%, 11%, 56.5%) hex: #cf1c90

  

> color name f12lila #4b148f

Color 'f12lila' is opaque: rgb(29.4%, 7.84%, 56.1%) hex: #4b148f

  

> color name f13dunkelblau #2E2EF7

Color 'f13dunkelblau' is opaque: rgb(18%, 18%, 96.9%) hex: #2e2ef7

  

> color name f14blau #00AAFF

Color 'f14blau' is opaque: rgb(0%, 66.7%, 100%) hex: #00aaff

  

> color name f15cyan #60e2d6

Color 'f15cyan' is opaque: rgb(37.6%, 88.6%, 83.9%) hex: #60e2d6

  

> color name f16blaugrün #30ffa6

Color 'f16blaugrün' is opaque: rgb(18.8%, 100%, 65.1%) hex: #30ffa6

  

> color name f17grün #00FF00

Color 'f17grün' is opaque: rgb(0%, 100%, 0%) hex: #00ff00

  

> color name f18dunkelgrün #228B22

Color 'f18dunkelgrün' is opaque: rgb(13.3%, 54.5%, 13.3%) hex: #228b22

  

> color name f19hellgrau #DCDCDC

Color 'f19hellgrau' is opaque: gray(86.3%) hex: #dcdcdc

  

> color name f20grau #B2B2B2

Color 'f20grau' is opaque: gray(69.8%) hex: #b2b2b2

  

> color name f21anthrazit #323F45

Color 'f21anthrazit' is opaque: rgb(19.6%, 24.7%, 27.1%) hex: #323f45

  

> alias localres color sample #$1 map #$2 offset 0.0 update true palette
> ""#0000E7:#001CE7:#0039E7:#0056E7:#0073E7:#0090E7:#00ADE7:#00CAE7:#00E7E7:#00E7CA:#00E7AD:#00E790:#00E773:#00E756:#00E739:#00E71C:#00E700:#1CE700:#39E700:#56E700:#73E700:#90E700:#ADE700:#CAE700:#E7E700:#E7CA00:#E7AD00:#E79000:#E77300:#E75600:#E73900:#E71C00:#E70000""
> range $3,$4

> alias mk color zone #$2 near #$1 sharpEdges true distance 3; fun F4 'mk $1
> $2'

> alias quickmk color zone #$2 near #$1 sharpEdges false distance 3; fun F4
> 'quickmk $1 $2'

> alias mapcolour color zone #$2 near #$1 sharpEdges true distance $3

> alias mapmorph volume morph #$1 #$2 constantVolume true frames 9999 playStep
> $3

> alias mapseries volume morph #$1-$2 constantVolume true frames 9999 playStep
> $3

> alias consurf color byattr seq_conservation protein palette cyanmaroon
> novalue yellow

> alias chaininfo preset custom chaininfo

> alias foto save browse format tiff height 4000 width 5500 supersample 4
> transparentBackground false

> alias durch save browse format tiff height 4000 width 5500 supersample 4
> transparentBackground true

> alias session save browse format session includeMaps true compress lz4

> alias nomapsession save browse format session includeMaps false compress lz4

> alias splitup color zone #$1 near sel sharpEdges true distance $2

> alias quicksplitup color zone #$1 near sel sharpEdges false distance $2

> alias spalt volume splitbyzone #$1

> alias undust surface undust #$1

> alias dust surface dust #$2 size $1

> alias dust1 surface dust #$1 size 1

> alias dust2 surface dust #$1 size 2

> alias dust3 surface dust #$1 size 3

> alias dust4 surface dust #$1 size 4

> alias dust5 surface dust #$1 size 5

> alias dust6 surface dust #$1 size 6

> alias dust7 surface dust #$1 size 7

> alias dust8 surface dust #$1 size 8

> alias dust9 surface dust #$1 size 9

> alias dust10 surface dust #$1 size 10

> alias dust11 surface dust #$1 size 11

> alias dust12 surface dust #$1 size 12

> alias dust13 surface dust #$1 size 13

> alias dust14 surface dust #$1 size 14

> alias dust15 surface dust #$1 size 15

> alias dust20 surface dust #$1 size 20

> alias dust25 surface dust #$1 size 25

> alias dust30 surface dust #$1 size 30

> alias dust35 surface dust #$1 size 35

> alias dust40 surface dust #$1 size 40

> alias dust45 surface dust #$1 size 45

> alias dust50 surface dust #$1 size 50

> alias sunset color sample #$1 map #$2 offset 0.1 update true palette
> ""#364B9A:#4A7BB7:#6EA6CD:#98CAE1:#C2E4EF:#EAECCC:#FEDA8B:#FDB366:#F67E4B:#DD3D2D:#A50026""
> range $3,$4

> alias nicemap volume #$1 subdivideSurface true surfacesmoothing true
> smoothLines true squareMesh false meshLighting true

> alias unnicemap volume #$1 subdivideSurface false surfacesmoothing false
> smoothLines false squareMesh true meshLighting true

> alias figure lighting soft ; lighting multishadow 1024 ; graphics
> silhouettes true color black width $1 depthJump 0.03 ; set bgColor white ;
> camera ortho

> alias tryfigure lighting soft ; lighting multishadow 1024 ; graphics
> silhouettes true color black width $1 depthJump 0.01 ; set bgColor white ;
> camera ortho; cartoon style width 2.4 thickness 0.4; lighting
> ambientintensity 1.2 fillIntensity 0.4

> alias abbild sel zone sel 1 #$1 residues true extend true

> alias abbild+ sel zone sel 1 #$1 residues true extend true; show sel; sel
> intersect #$1; style sel stick; sel compound; sel zone sel 7 #$1 residues
> true extend true; sel intersect :HOH:MG:K:ZN:SPD:SPM; show sel; sel
> intersect :MG; style sel ball; size sel ballscale 0.5

> alias network sel zone sel $1 #$2 residues true extend true

> alias network34 sel zone sel 3.4 #$1 residues true extend true

> alias network4 sel zone sel 4 #$1 residues true extend true

> alias network10 sel zone sel 10 #$1 residues true extend true

> alias wasser sel zone #$1 3.4 #$2 residues true extend true; sel intersect
> #$2:HOH; sel add #$1; sel zone sel 3.4 #$2 residues true extend true

> alias 1st-wasser sel zone #$1 3.4 #$2 residues true extend true; sel
> intersect #$2:HOH

> alias farben color sel f14; sel #$1 & nucleic; color sel f20; sel #$1 &
> protein; color sel f07; sel #$1:HOH; color sel red; sel #$1:MG; color sel
> f17; sel #$1:K; color sel f15

> alias magnesiumcluster sel zone sel 2.7 #$1 extend true; sel intersect
> #$1@o*:HOH:MG

> alias magnesiumcluster4 sel zone sel 4 #$1 extend true; sel intersect
> #$1@o*:HOH:MG

> alias upsplit color zone #$1 near #$3 sharpEdges true distance $2

> alias weihwasser sel zone #$1 3.4 #$2 residues true extend true; sel
> intersect #$2:HOH; sel add #$1; sel subtract badwaters; sel zone sel 3.4 #$2
> residues true extend true; sel subtract badwaters

> alias fixall size pseudobondRadius 0.075; sel :MG; style sel ball; size sel
> ballscale 0.5

> alias fix size pseudobondRadius 0.075; da $1; sel intersect :MG; style sel
> ball; color sel f17; size sel ballscale 0.5; da $1; sel intersect
> ##name=""K""; color sel blueviolet

> alias pixel zoom pixelsize 0.04

> alias da sel #$1 @@display

> alias neu hide #$1; da $2; sel intersect ligand; mm #$1 to #$2 matrix
> Nucleic; network10 $1,$2; mm #!$1 & sel to #$2 & sel matrix Nucleic; da $2;
> abbild+ $1

> alias neu2 da $1; sel intersect ligand; farben $1; da $1; color sel byhet;
> hbonds sel color f05 restrict both interModel false intraMol false intraRes
> false; sel intersect :HOH; style sel stick; combine #$1; da $1; sel
> intersect :HOH; name frozen temp sel; hide sel; da $1; sel intersect
> ##name=""hydrogen bonds""; del pbonds sel; sel temp; show sel; da $2; sel
> intersect :HOH; hide sel; da $2; sel intersect nucleic; sel intersect
> ##name=""hydrogen bonds""; hide sel; da $2; sel intersect protein; sel
> intersect ##name=""hydrogen bonds""; hide sel; da $1; sel intersect
> ##name=""hydrogen bonds""; color sel f15

> alias kalium da $1; sel intersect :K; style sel ball; size sel ballscale
> 0.3; name frozen temp sel; sel zone sel 3.5 #$1 extend true; sel intersect
> @o*,n*:K; contacts sel restrict temp overlapCutoff -3.0 color #8A2BE2 name K
> log true

> alias magnesium da $1; sel intersect :MG; style sel ball; size sel ballscale
> 0.5; name frozen temp sel; magnesiumcluster $1; contacts sel restrict temp
> overlapCutoff -0.8 color #00FF00 name Mg log true

UCSF ChimeraX version: 1.7.1 (2024-01-23)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 4.1 ATI-5.5.17
OpenGL renderer: AMD Radeon Pro 580X OpenGL Engine
OpenGL vendor: ATI Technologies Inc.

Python: 3.11.2
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: iMac
      Model Identifier: iMac19,1
      Processor Name: 6-Core Intel Core i5
      Processor Speed: 3,7 GHz
      Number of Processors: 1
      Total Number of Cores: 6
      L2 Cache (per Core): 256 KB
      L3 Cache: 9 MB
      Memory: 32 GB
      System Firmware Version: 2020.80.5.0.0
      OS Loader Version: 580~1678
      SMC Version (system): 2.46f13

Software:

    System Software Overview:

      System Version: macOS 14.4.1 (23E224)
      Kernel Version: Darwin 23.4.0
      Time since boot: 29 days, 5 hours, 45 minutes

Graphics/Displays:

    Radeon Pro 580X:

      Chipset Model: Radeon Pro 580X
      Type: GPU
      Bus: PCIe
      PCIe Lane Width: x16
      VRAM (Total): 8 GB
      Vendor: AMD (0x1002)
      Device ID: 0x67df
      Revision ID: 0x00c0
      ROM Revision: 113-D0008A-042
      VBIOS Version: 113-D0008A1X-009
      EFI Driver Version: 01.B1.042
      Metal Support: Metal 2
      Displays:
        iMac:
          Display Type: Built-In Retina LCD
          Resolution: Retina 5K (5120 x 2880)
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal
        DELL U2412M:
          Resolution: 1920 x 1200 (WUXGA - Widescreen Ultra eXtended Graphics Array)
          UI Looks like: 1920 x 1200
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Display Serial Number: 0FFXD31242JL
          Mirror: Off
          Online: Yes
          Rotation: Supported
          Connection Type: Thunderbolt/DisplayPort


Installed Packages:
    alabaster: 0.7.16
    appdirs: 1.4.4
    appnope: 0.1.3
    asttokens: 2.4.1
    Babel: 2.14.0
    backcall: 0.2.0
    beautifulsoup4: 4.11.2
    blockdiag: 3.0.0
    blosc2: 2.0.0
    build: 0.10.0
    certifi: 2022.12.7
    cftime: 1.6.3
    charset-normalizer: 3.3.2
    ChimeraX-AddCharge: 1.5.13
    ChimeraX-AddH: 2.2.5
    ChimeraX-AlignmentAlgorithms: 2.0.1
    ChimeraX-AlignmentHdrs: 3.4.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.12.2
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.1.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.49.1
    ChimeraX-AtomicLibrary: 12.1.5
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3.2
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.10.5
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.2
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.2
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.3.2
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-Clipper: 0.22.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.5
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.7.1
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2
    ChimeraX-DistMonitor: 1.4
    ChimeraX-DockPrep: 1.1.3
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-Label: 1.1.8
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.1.6
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.1.4
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.1.2
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.6.1
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.12.1
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.14
    ChimeraX-ModelPanel: 1.4
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.1
    ChimeraX-NRRD: 1.1
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.13.1
    ChimeraX-PDB: 2.7.3
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.2
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.2
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.11
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.2
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.12.4
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.2
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.33.3
    ChimeraX-uniprot: 2.3
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.3.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.3
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.1
    contourpy: 1.2.0
    cxservices: 1.2.2
    cycler: 0.12.1
    Cython: 0.29.33
    debugpy: 1.8.0
    decorator: 5.1.1
    docutils: 0.19
    executing: 2.0.1
    filelock: 3.9.0
    fonttools: 4.47.2
    funcparserlib: 2.0.0a0
    glfw: 2.6.4
    grako: 3.16.5
    h5py: 3.10.0
    html2text: 2020.1.16
    idna: 3.6
    ihm: 0.38
    imagecodecs: 2023.9.18
    imagesize: 1.4.1
    ipykernel: 6.23.2
    ipython: 8.14.0
    ipython-genutils: 0.2.0
    ipywidgets: 8.1.1
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 8.2.0
    jupyter-core: 5.7.1
    jupyterlab-widgets: 3.0.9
    kiwisolver: 1.4.5
    line-profiler: 4.0.2
    lxml: 4.9.2
    lz4: 4.3.2
    MarkupSafe: 2.1.4
    matplotlib: 3.7.2
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.6.0
    netCDF4: 1.6.2
    networkx: 3.1
    nibabel: 5.0.1
    nptyping: 2.5.0
    numexpr: 2.8.8
    numpy: 1.25.1
    openvr: 1.23.701
    packaging: 21.3
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pexpect: 4.9.0
    pickleshare: 0.7.5
    pillow: 10.2.0
    pip: 23.0
    pkginfo: 1.9.6
    platformdirs: 4.1.0
    prompt-toolkit: 3.0.43
    psutil: 5.9.5
    ptyprocess: 0.7.0
    pure-eval: 0.2.2
    py-cpuinfo: 9.0.0
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.16.1
    pynrrd: 1.0.0
    PyOpenGL: 3.1.7
    PyOpenGL-accelerate: 3.1.7
    pyopenxr: 1.0.2801
    pyparsing: 3.0.9
    pyproject-hooks: 1.0.0
    PyQt6-commercial: 6.3.1
    PyQt6-Qt6: 6.3.2
    PyQt6-sip: 13.4.0
    PyQt6-WebEngine-commercial: 6.3.1
    PyQt6-WebEngine-Qt6: 6.3.2
    python-dateutil: 2.8.2
    pytz: 2023.3.post1
    pyzmq: 25.1.2
    qtconsole: 5.4.3
    QtPy: 2.4.1
    RandomWords: 0.4.0
    requests: 2.31.0
    scipy: 1.11.1
    setuptools: 67.4.0
    setuptools-scm: 7.0.5
    sfftk-rw: 0.7.3
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.5
    sphinx: 6.1.3
    sphinx-autodoc-typehints: 1.22
    sphinxcontrib-applehelp: 1.0.8
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.6
    sphinxcontrib-htmlhelp: 2.0.5
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.7
    sphinxcontrib-serializinghtml: 1.1.10
    stack-data: 0.6.3
    superqt: 0.5.0
    tables: 3.8.0
    tcia-utils: 1.5.1
    tifffile: 2023.7.18
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.4
    traitlets: 5.9.0
    typing-extensions: 4.9.0
    tzdata: 2023.4
    urllib3: 2.1.0
    wcwidth: 0.2.13
    webcolors: 1.12
    wheel: 0.38.4
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.9

}}}
"	defect	closed	normal		Core		duplicate						all	ChimeraX