id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
1489	limit PDB output to only include HELIX and SHEET records for included atoms	Greg Couch	Eric Pettersen	"And example of when there should be no HELIX nor SHEET records:
{{{
open 6h67
show :ttd only
write ttd.pdb displayedOnly true
}}}
Because when ttd.pdb is opened in ChimeraX, it gives many warnings:
{{{
Start residue of secondary structure not found: HELIX 1 1 THR A 20 SER A 28 1 9
Start residue of secondary structure not found: HELIX 2 2 PHE A 90 ALA A 100 1 11
Start residue of secondary structure not found: HELIX 3 3 LYS A 111 LEU A 125 1 15
Start residue of secondary structure not found: HELIX 4 4 LYS A 135 ILE A 139 1 5
Start residue of secondary structure not found: HELIX 5 5 THR A 176 ASP A 199 1 24
293 messages similar to the above omitted
}}}"	defect	assigned	minor		Input/Output								all	ChimeraX