id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 1469 Crash in Apple graphics driver (glDrawElementsInstanced) nicholas.sofos@… Tom Goddard "{{{ The following bug report has been submitted: Platform: Darwin-18.2.0-x86_64-i386-64bit ChimeraX Version: 0.8 (2018-11-11) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Process: ChimeraX [1148] Path: /Applications/ChimeraX.app/Contents/MacOS/ChimeraX Identifier: edu.ucsf.cgl.ChimeraX Version: 0.8.0 (0.8.0.0) Code Type: X86-64 (Native) Parent Process: ??? [1] Responsible: ChimeraX [1148] User ID: 181769578 Date/Time: 2018-11-20 09:50:59.219 +0100 OS Version: Mac OS X 10.14.1 (18B75) Report Version: 12 Anonymous UUID: 00C5771C-AE1C-2CE7-C0D4-5BB8BFE5B80D Sleep/Wake UUID: 851F737A-E404-4943-8F63-4F4B0B45ADA8 Time Awake Since Boot: 48000 seconds Time Since Wake: 3400 seconds System Integrity Protection: enabled Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread Exception Type: EXC_BAD_INSTRUCTION (SIGILL) Exception Codes: 0x0000000000000001, 0x0000000000000000 Exception Note: EXC_CORPSE_NOTIFY Application Specific Information: *** CFRetain() called with NULL *** Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread 0 libsystem_kernel.dylib 0x00007fff7af02b86 __pthread_kill + 10 1 libsystem_pthread.dylib 0x00007fff7afb8c50 pthread_kill + 285 2 libsystem_c.dylib 0x00007fff7ae1f096 raise + 26 3 libsystem_platform.dylib 0x00007fff7afadb3d _sigtramp + 29 4 ??? 000000000000000000 0 + 0 5 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libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 12 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 13 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 11:: BrowserBlockingWorker1/76035 0 libsystem_kernel.dylib 0x00007fff7af001b2 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff7afb95cb _pthread_cond_wait + 724 2 QtWebEngineCore 0x0000000113941c1f 0x112cd2000 + 13040671 3 QtWebEngineCore 0x00000001139412e6 0x112cd2000 + 13038310 4 QtWebEngineCore 0x000000011394518d 0x112cd2000 + 13054349 5 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 6 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 7 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 8 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 12:: CompositorTileWorker1/56579 0 libsystem_kernel.dylib 0x00007fff7af001b2 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff7afb95cb _pthread_cond_wait + 724 2 QtWebEngineCore 0x00000001144e0cf8 0x112cd2000 + 25226488 3 QtWebEngineCore 0x000000011394518d 0x112cd2000 + 13054349 4 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 5 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 6 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 7 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 13:: AudioThread 0 libsystem_kernel.dylib 0x00007fff7aefcc2a mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff7aefd174 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff4dbe7da2 __CFRunLoopServiceMachPort + 337 3 com.apple.CoreFoundation 0x00007fff4dbe72f1 __CFRunLoopRun + 1654 4 com.apple.CoreFoundation 0x00007fff4dbe6a28 CFRunLoopRunSpecific + 463 5 QtWebEngineCore 0x00000001138f290f 0x112cd2000 + 12716303 6 QtWebEngineCore 0x00000001138f22a4 0x112cd2000 + 12714660 7 QtWebEngineCore 0x00000001138ef10e 0x112cd2000 + 12701966 8 QtWebEngineCore 0x0000000113913531 0x112cd2000 + 12850481 9 QtWebEngineCore 0x000000011394736b 0x112cd2000 + 13063019 10 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 11 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 12 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 13 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 14:: Chrome_InProcGpuThread 0 libsystem_kernel.dylib 0x00007fff7aefcc2a mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff7aefd174 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff4dbe7da2 __CFRunLoopServiceMachPort + 337 3 com.apple.CoreFoundation 0x00007fff4dbe72f1 __CFRunLoopRun + 1654 4 com.apple.CoreFoundation 0x00007fff4dbe6a28 CFRunLoopRunSpecific + 463 5 QtWebEngineCore 0x00000001138f290f 0x112cd2000 + 12716303 6 QtWebEngineCore 0x00000001138f22a4 0x112cd2000 + 12714660 7 QtWebEngineCore 0x00000001138ef10e 0x112cd2000 + 12701966 8 QtWebEngineCore 0x0000000113913531 0x112cd2000 + 12850481 9 QtWebEngineCore 0x000000011394736b 0x112cd2000 + 13063019 10 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 11 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 12 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 13 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 15:: Chrome_ChildIOThread 0 libsystem_kernel.dylib 0x00007fff7af03052 kevent + 10 1 QtWebEngineCore 0x0000000113e00469 0x112cd2000 + 18015337 2 QtWebEngineCore 0x0000000113dfd75d 0x112cd2000 + 18003805 3 QtWebEngineCore 0x00000001138f199f 0x112cd2000 + 12712351 4 QtWebEngineCore 0x00000001138ef10e 0x112cd2000 + 12701966 5 QtWebEngineCore 0x0000000113913531 0x112cd2000 + 12850481 6 QtWebEngineCore 0x000000011394736b 0x112cd2000 + 13063019 7 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 8 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 9 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 10 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 16:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff7af04b8e poll + 10 1 QtCore 0x00000001121f0b40 qt_safe_poll(pollfd*, unsigned int, timespec const*) + 544 2 QtCore 0x00000001121f21b9 QEventDispatcherUNIX::processEvents(QFlags) + 857 3 QtCore 0x0000000112199742 QEventLoop::exec(QFlags) + 418 4 QtWebEngineCore 0x0000000112cf3c4a 0x112cd2000 + 138314 5 QtWebEngineCore 0x00000001138ef10e 0x112cd2000 + 12701966 6 QtWebEngineCore 0x0000000113913531 0x112cd2000 + 12850481 7 QtWebEngineCore 0x000000011394736b 0x112cd2000 + 13063019 8 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 9 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 10 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 11 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 17:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff7af04b8e poll + 10 1 QtCore 0x00000001121f0b40 qt_safe_poll(pollfd*, unsigned int, timespec const*) + 544 2 QtCore 0x00000001121f21b9 QEventDispatcherUNIX::processEvents(QFlags) + 857 3 QtCore 0x0000000112199742 QEventLoop::exec(QFlags) + 418 4 QtWebEngineCore 0x0000000112cf3c4a 0x112cd2000 + 138314 5 QtWebEngineCore 0x00000001138ef10e 0x112cd2000 + 12701966 6 QtWebEngineCore 0x0000000113913531 0x112cd2000 + 12850481 7 QtWebEngineCore 0x000000011394736b 0x112cd2000 + 13063019 8 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 9 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 10 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 11 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 18:: BrowserBlockingWorker2/100463 0 libsystem_kernel.dylib 0x00007fff7af001b2 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff7afb95cb _pthread_cond_wait + 724 2 QtWebEngineCore 0x0000000113941c1f 0x112cd2000 + 13040671 3 QtWebEngineCore 0x00000001139412e6 0x112cd2000 + 13038310 4 QtWebEngineCore 0x000000011394518d 0x112cd2000 + 13054349 5 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 6 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 7 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 8 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 19:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff7af04b8e poll + 10 1 QtCore 0x00000001121f0b40 qt_safe_poll(pollfd*, unsigned int, timespec const*) + 544 2 QtCore 0x00000001121f21b9 QEventDispatcherUNIX::processEvents(QFlags) + 857 3 QtCore 0x0000000112199742 QEventLoop::exec(QFlags) + 418 4 QtWebEngineCore 0x0000000112cf3c4a 0x112cd2000 + 138314 5 QtWebEngineCore 0x00000001138ef10e 0x112cd2000 + 12701966 6 QtWebEngineCore 0x0000000113913531 0x112cd2000 + 12850481 7 QtWebEngineCore 0x000000011394736b 0x112cd2000 + 13063019 8 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 9 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 10 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 11 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 20:: BrowserBlockingWorker3/142671 0 libsystem_kernel.dylib 0x00007fff7af001b2 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff7afb95cb _pthread_cond_wait + 724 2 QtWebEngineCore 0x0000000113941c1f 0x112cd2000 + 13040671 3 QtWebEngineCore 0x00000001139412e6 0x112cd2000 + 13038310 4 QtWebEngineCore 0x000000011394518d 0x112cd2000 + 13054349 5 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 6 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 7 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 8 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 21:: WorkerPool/116619 0 libsystem_kernel.dylib 0x00007fff7af001b2 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff7afb95fe _pthread_cond_wait + 775 2 QtWebEngineCore 0x000000011392b2bb 0x112cd2000 + 12948155 3 QtWebEngineCore 0x00000001139496e9 0x112cd2000 + 13072105 4 QtWebEngineCore 0x0000000113949c57 0x112cd2000 + 13073495 5 QtWebEngineCore 0x0000000113940667 0x112cd2000 + 13035111 6 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 7 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 8 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 22: 0 libsystem_kernel.dylib 0x00007fff7af001b2 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff7afb95cb _pthread_cond_wait + 724 2 libopenblasp-r0.3.0.dev.dylib 0x000000010536a72b blas_thread_server + 187 3 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 4 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 5 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 23: 0 libsystem_kernel.dylib 0x00007fff7af001b2 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff7afb95cb _pthread_cond_wait + 724 2 libopenblasp-r0.3.0.dev.dylib 0x000000010536a72b blas_thread_server + 187 3 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 4 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 5 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 24: 0 libsystem_kernel.dylib 0x00007fff7af001b2 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff7afb95cb _pthread_cond_wait + 724 2 libopenblasp-r0.3.0.dev.dylib 0x000000010536a72b blas_thread_server + 187 3 libsystem_pthread.dylib 0x00007fff7afb6339 _pthread_body + 126 4 libsystem_pthread.dylib 0x00007fff7afb92a7 _pthread_start + 70 5 libsystem_pthread.dylib 0x00007fff7afb5445 thread_start + 13 Thread 25: 0 libsystem_pthread.dylib 0x00007fff7afb5428 start_wqthread + 0 1 ??? 0x0000000054485244 0 + 1414025796 Thread 0 crashed with X86 Thread State (64-bit): rax: 0x0000000000000000 rbx: 0x000000010e94f5c0 rcx: 0x00000001048fda48 rdx: 0x0000000000000000 rdi: 0x0000000000000307 rsi: 0x0000000000000004 rbp: 0x00000001048fda80 rsp: 0x00000001048fda48 r8: 0x00000001048fdf48 r9: 0xfc25601af94b9b96 r10: 0x000000010e94f66c r11: 0x0000000000000287 r12: 0x0000000000000307 r13: 0x0000000500000014 r14: 0x0000000000000004 r15: 0x000000000000002d rip: 0x00007fff7af02b86 rfl: 0x0000000000000286 cr2: 0x00000001046be7f8 Logical CPU: 0 Error Code: 0x02000148 Trap Number: 133 Binary Images: 0x1044f2000 - 0x1044f2ff3 +edu.ucsf.cgl.ChimeraX (0.8.0 - 0.8.0.0) /Applications/ChimeraX.app/Contents/MacOS/ChimeraX 0x1044f9000 - 0x1046bdff7 +org.python.python (3.6.4, [c] 2001-2017 Python Software Foundation. - 3.6.4) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/Python 0x104ac4000 - 0x104ac5ff7 +_heapq.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_heapq.cpython-36m-darwin.so 0x104be9000 - 0x104c05ff7 +libz.1.2.11.dylib (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/PIL/.dylibs/libz.1.2.11.dylib 0x104c09000 - 0x104c0dff3 +libqmacjp2.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/PyQt5/Qt/plugins/imageformats/libqmacjp2.dylib 0x104d12000 - 0x104d12fff +_bisect.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_bisect.cpython-36m-darwin.so 0x104d15000 - 0x104d19fff +math.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/math.cpython-36m-darwin.so 0x104d60000 - 0x104d65ffb +array.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/array.cpython-36m-darwin.so 0x104d6f000 - 0x104d75ff7 +libpdbconnect.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/chimerax/atomic/pdb/lib/libpdbconnect.dylib 0x104d80000 - 0x104d86fff +libqgif.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/PyQt5/Qt/plugins/imageformats/libqgif.dylib 0x104dca000 - 0x104f65ff7 +multiarray.cpython-36m-darwin.so (???) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/core/multiarray.cpython-36m-darwin.so 0x10503d000 - 0x1091c05a7 +libopenblasp-r0.3.0.dev.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/numpy/.dylibs/libopenblasp-r0.3.0.dev.dylib 0x109533000 - 0x10964aff7 +libgfortran.3.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/numpy/.dylibs/libgfortran.3.dylib 0x1096ae000 - 0x1096e4fff +libquadmath.0.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/numpy/.dylibs/libquadmath.0.dylib 0x1096f3000 - 0x109708ff7 +libgcc_s.1.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.6/site-packages/numpy/.dylibs/libgcc_s.1.dylib 0x10d754000 - 0x10d760fff +_datetime.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_datetime.cpython-36m-darwin.so 0x10d76b000 - 0x10d858fff +umath.cpython-36m-darwin.so (???) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/core/umath.cpython-36m-darwin.so 0x10d918000 - 0x10d929ff7 +_ctypes.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_ctypes.cpython-36m-darwin.so 0x10d93a000 - 0x10d93eff7 +_struct.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_struct.cpython-36m-darwin.so 0x10d988000 - 0x10d99aff7 +_pickle.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_pickle.cpython-36m-darwin.so 0x10dbf7000 - 0x10dbfaff7 +zlib.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/zlib.cpython-36m-darwin.so 0x10dc00000 - 0x10dc14ff7 +libz.1.2.11.dylib (0) /Applications/ChimeraX.app/Contents/lib/libz.1.2.11.dylib 0x10dc18000 - 0x10dc19ffb +_bz2.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_bz2.cpython-36m-darwin.so 0x10dc1d000 - 0x10dc1dff7 +grp.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/grp.cpython-36m-darwin.so 0x10dc20000 - 0x10dc22fff +_hashlib.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_hashlib.cpython-36m-darwin.so 0x10dc27000 - 0x10dc6bfff +libssl.1.0.0.dylib (0) /Applications/ChimeraX.app/Contents/lib/libssl.1.0.0.dylib 0x10dc86000 - 0x10dda8fd7 +libcrypto.1.0.0.dylib (0) /Applications/ChimeraX.app/Contents/lib/libcrypto.1.0.0.dylib 0x10de1b000 - 0x10de21ffb +_blake2.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_blake2.cpython-36m-darwin.so 0x10de26000 - 0x10de36ff3 +_sha3.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_sha3.cpython-36m-darwin.so 0x10de3c000 - 0x10de3dffb +_random.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_random.cpython-36m-darwin.so 0x10dec1000 - 0x10dec2ff7 +lapack_lite.cpython-36m-darwin.so (???) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/linalg/lapack_lite.cpython-36m-darwin.so 0x10dec6000 - 0x10dee1ff7 +_umath_linalg.cpython-36m-darwin.so (???) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/linalg/_umath_linalg.cpython-36m-darwin.so 0x10df6f000 - 0x10dfa3ff7 +_decimal.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_decimal.cpython-36m-darwin.so 0x10dfc2000 - 0x10dfd2ff7 +_multiarray_tests.cpython-36m-darwin.so (???) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/core/_multiarray_tests.cpython-36m-darwin.so 0x10e021000 - 0x10e02afff +fftpack_lite.cpython-36m-darwin.so (???) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/fft/fftpack_lite.cpython-36m-darwin.so 0x10e06e000 - 0x10e12cfff +mtrand.cpython-36m-darwin.so (???) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/random/mtrand.cpython-36m-darwin.so 0x10e1f1000 - 0x10e1f7fff +_json.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_json.cpython-36m-darwin.so 0x10e2bc000 - 0x10e2c8fff +_ssl.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_ssl.cpython-36m-darwin.so 0x10e2d8000 - 0x10e2e1ffb +_socket.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/_socket.cpython-36m-darwin.so 0x10e2ed000 - 0x10e2efffb +select.cpython-36m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/lib-dynload/select.cpython-36m-darwin.so 0x10e335000 - 0x10e338ff3 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0x7fff784eb000 - 0x7fff78500fff libc++abi.dylib (400.17) /usr/lib/libc++abi.dylib 0x7fff78501000 - 0x7fff78501ff3 libcharset.1.dylib (51.200.6) /usr/lib/libcharset.1.dylib 0x7fff78502000 - 0x7fff78512ffb libcmph.dylib (6.15.1) /usr/lib/libcmph.dylib 0x7fff78513000 - 0x7fff7852bffb libcompression.dylib (52.200.13) /usr/lib/libcompression.dylib 0x7fff787d6000 - 0x7fff787ecfff libcoretls.dylib (155.220.1) /usr/lib/libcoretls.dylib 0x7fff787ed000 - 0x7fff787eeff3 libcoretls_cfhelpers.dylib (155.220.1) /usr/lib/libcoretls_cfhelpers.dylib 0x7fff7898d000 - 0x7fff78b1dff3 libcrypto.35.dylib (22.200.4) /usr/lib/libcrypto.35.dylib 0x7fff78cb8000 - 0x7fff78e50ff7 libcrypto.42.dylib (22.200.4) /usr/lib/libcrypto.42.dylib 0x7fff78e51000 - 0x7fff78e5cff7 libcsfde.dylib (546.50.1) /usr/lib/libcsfde.dylib 0x7fff78e65000 - 0x7fff78ebbffb libcups.2.dylib (462.9) /usr/lib/libcups.2.dylib 0x7fff78ee5000 - 0x7fff78f39ff3 libcurl.4.dylib (105.200.2) /usr/lib/libcurl.4.dylib 0x7fff78ff3000 - 0x7fff78ff3fff libenergytrace.dylib (17.200.1) /usr/lib/libenergytrace.dylib 0x7fff78ff4000 - 0x7fff7900dffb libexpat.1.dylib (16.1.1) /usr/lib/libexpat.1.dylib 0x7fff79025000 - 0x7fff7902aff7 libgermantok.dylib (17.15.2) /usr/lib/libgermantok.dylib 0x7fff7902b000 - 0x7fff79030ff7 libheimdal-asn1.dylib (520.220.2) /usr/lib/libheimdal-asn1.dylib 0x7fff7905c000 - 0x7fff7914dff7 libiconv.2.dylib (51.200.6) /usr/lib/libiconv.2.dylib 0x7fff7914e000 - 0x7fff793b1ffb libicucore.A.dylib (62108.0.1) /usr/lib/libicucore.A.dylib 0x7fff793fe000 - 0x7fff793fffff liblangid.dylib (128.15.1) /usr/lib/liblangid.dylib 0x7fff79400000 - 0x7fff79418fff liblzma.5.dylib (10.200.3) /usr/lib/liblzma.5.dylib 0x7fff79430000 - 0x7fff794e0fff libmecab.1.0.0.dylib (779.19.2) /usr/lib/libmecab.1.0.0.dylib 0x7fff794e1000 - 0x7fff7971efff libmecabra.dylib (779.19.2) /usr/lib/libmecabra.dylib 0x7fff798f6000 - 0x7fff79c4efff libnetwork.dylib (1229.221.1) /usr/lib/libnetwork.dylib 0x7fff79cdf000 - 0x7fff7a465fe7 libobjc.A.dylib (750.1) /usr/lib/libobjc.A.dylib 0x7fff7a466000 - 0x7fff7a467fff libodfde.dylib (24.50.1) /usr/lib/libodfde.dylib 0x7fff7a478000 - 0x7fff7a47cffb libpam.2.dylib (22.200.1) /usr/lib/libpam.2.dylib 0x7fff7a47f000 - 0x7fff7a4b5ff7 libpcap.A.dylib (79.200.4) /usr/lib/libpcap.A.dylib 0x7fff7a5cf000 - 0x7fff7a5e7ffb libresolv.9.dylib (65.200.2) /usr/lib/libresolv.9.dylib 0x7fff7a5e9000 - 0x7fff7a625ff7 libsandbox.1.dylib (851.220.9) /usr/lib/libsandbox.1.dylib 0x7fff7a626000 - 0x7fff7a638ff7 libsasl2.2.dylib (211) /usr/lib/libsasl2.2.dylib 0x7fff7a639000 - 0x7fff7a63aff7 libspindump.dylib (267.1) /usr/lib/libspindump.dylib 0x7fff7a63b000 - 0x7fff7a812fe7 libsqlite3.dylib (274.20) /usr/lib/libsqlite3.dylib 0x7fff7a915000 - 0x7fff7a962fff libssl.44.dylib (22.200.4) /usr/lib/libssl.44.dylib 0x7fff7aa9f000 - 0x7fff7aaa2ffb libutil.dylib (51.200.4) /usr/lib/libutil.dylib 0x7fff7aaa3000 - 0x7fff7aab0fff libxar.1.dylib (404) /usr/lib/libxar.1.dylib 0x7fff7aab5000 - 0x7fff7ab98fff libxml2.2.dylib (32.8) /usr/lib/libxml2.2.dylib 0x7fff7ab99000 - 0x7fff7abc1ff3 libxslt.1.dylib (16.1) /usr/lib/libxslt.1.dylib 0x7fff7abc2000 - 0x7fff7abd4ffb libz.1.dylib (70.200.4) /usr/lib/libz.1.dylib 0x7fff7ac45000 - 0x7fff7ac49ff3 libcache.dylib (81) /usr/lib/system/libcache.dylib 0x7fff7ac4a000 - 0x7fff7ac54ff3 libcommonCrypto.dylib (60118.220.1) /usr/lib/system/libcommonCrypto.dylib 0x7fff7ac55000 - 0x7fff7ac5cfff libcompiler_rt.dylib (63.4) /usr/lib/system/libcompiler_rt.dylib 0x7fff7ac5d000 - 0x7fff7ac66ff3 libcopyfile.dylib (146.200.3) /usr/lib/system/libcopyfile.dylib 0x7fff7ac67000 - 0x7fff7acebfdf libcorecrypto.dylib (602.220.6) /usr/lib/system/libcorecrypto.dylib 0x7fff7ad72000 - 0x7fff7adacff7 libdispatch.dylib (1008.220.2) /usr/lib/system/libdispatch.dylib 0x7fff7adad000 - 0x7fff7addcfff libdyld.dylib (635.2) /usr/lib/system/libdyld.dylib 0x7fff7addd000 - 0x7fff7adddffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib 0x7fff7adde000 - 0x7fff7adeaff7 libkxld.dylib (4903.221.2) /usr/lib/system/libkxld.dylib 0x7fff7adeb000 - 0x7fff7adebff7 liblaunch.dylib (1336.220.5) /usr/lib/system/liblaunch.dylib 0x7fff7adec000 - 0x7fff7adf1fff libmacho.dylib (921) /usr/lib/system/libmacho.dylib 0x7fff7adf2000 - 0x7fff7adf4ffb libquarantine.dylib (86.220.1) /usr/lib/system/libquarantine.dylib 0x7fff7adf5000 - 0x7fff7adf6ff3 libremovefile.dylib (45.200.2) /usr/lib/system/libremovefile.dylib 0x7fff7adf7000 - 0x7fff7ae0eff3 libsystem_asl.dylib (356.200.4) /usr/lib/system/libsystem_asl.dylib 0x7fff7ae0f000 - 0x7fff7ae0ffff libsystem_blocks.dylib (73) /usr/lib/system/libsystem_blocks.dylib 0x7fff7ae10000 - 0x7fff7ae98fff libsystem_c.dylib (1272.200.26) /usr/lib/system/libsystem_c.dylib 0x7fff7ae99000 - 0x7fff7ae9cff7 libsystem_configuration.dylib (963.200.27) /usr/lib/system/libsystem_configuration.dylib 0x7fff7ae9d000 - 0x7fff7aea0ff7 libsystem_coreservices.dylib (66) /usr/lib/system/libsystem_coreservices.dylib 0x7fff7aea1000 - 0x7fff7aea7ffb libsystem_darwin.dylib (1272.200.26) /usr/lib/system/libsystem_darwin.dylib 0x7fff7aea8000 - 0x7fff7aeaeff7 libsystem_dnssd.dylib (878.200.35) /usr/lib/system/libsystem_dnssd.dylib 0x7fff7aeaf000 - 0x7fff7aefbff3 libsystem_info.dylib (517.200.9) /usr/lib/system/libsystem_info.dylib 0x7fff7aefc000 - 0x7fff7af23ff7 libsystem_kernel.dylib (4903.221.2) /usr/lib/system/libsystem_kernel.dylib 0x7fff7af24000 - 0x7fff7af6fff7 libsystem_m.dylib (3158.200.7) /usr/lib/system/libsystem_m.dylib 0x7fff7af70000 - 0x7fff7af94ff7 libsystem_malloc.dylib (166.220.1) /usr/lib/system/libsystem_malloc.dylib 0x7fff7af95000 - 0x7fff7afa0ff3 libsystem_networkextension.dylib (767.220.1) /usr/lib/system/libsystem_networkextension.dylib 0x7fff7afa1000 - 0x7fff7afa8fff libsystem_notify.dylib (172.200.21) /usr/lib/system/libsystem_notify.dylib 0x7fff7afa9000 - 0x7fff7afb2fef libsystem_platform.dylib (177.200.16) /usr/lib/system/libsystem_platform.dylib 0x7fff7afb3000 - 0x7fff7afbdfff libsystem_pthread.dylib (330.220.2) /usr/lib/system/libsystem_pthread.dylib 0x7fff7afbe000 - 0x7fff7afc1ff7 libsystem_sandbox.dylib (851.220.9) /usr/lib/system/libsystem_sandbox.dylib 0x7fff7afc2000 - 0x7fff7afc4ff3 libsystem_secinit.dylib (30.220.1) /usr/lib/system/libsystem_secinit.dylib 0x7fff7afc5000 - 0x7fff7afccff7 libsystem_symptoms.dylib (820.227.2) /usr/lib/system/libsystem_symptoms.dylib 0x7fff7afcd000 - 0x7fff7afe2ff7 libsystem_trace.dylib (906.220.1) /usr/lib/system/libsystem_trace.dylib 0x7fff7afe4000 - 0x7fff7afe9ffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib 0x7fff7afea000 - 0x7fff7b01afff libxpc.dylib (1336.220.5) /usr/lib/system/libxpc.dylib External Modification Summary: Calls made by other processes targeting this process: task_for_pid: 9763 thread_create: 0 thread_set_state: 0 Calls made by this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by all processes on this machine: task_for_pid: 5040692 thread_create: 0 thread_set_state: 0 VM Region Summary: ReadOnly portion of Libraries: Total=679.9M resident=0K(0%) swapped_out_or_unallocated=679.9M(100%) Writable regions: Total=14.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=14.7G(100%) VIRTUAL REGION REGION TYPE SIZE COUNT (non-coalesced) =========== ======= ======= Accelerate framework 384K 4 Activity Tracing 256K 2 CG backing stores 18.7M 23 CG image 272K 43 CoreAnimation 1560K 87 CoreGraphics 8K 2 CoreImage 200K 42 CoreUI image data 2700K 43 CoreUI image file 568K 8 Foundation 4K 2 Kernel Alloc Once 8K 2 MALLOC 11.5G 177 MALLOC guard page 32K 9 MALLOC_LARGE (reserved) 384K 2 reserved VM address space (unallocated) MALLOC_NANO (reserved) 128.0M 2 reserved VM address space (unallocated) Memory Tag 242 12K 2 Memory Tag 251 44K 3 OpenGL GLSL 512K 7 STACK GUARD 100K 26 Stack 170.7M 27 Stack Guard 56.0M 2 VM_ALLOCATE 2.9G 296 VM_ALLOCATE (reserved) 32.0M 2 reserved VM address space (unallocated) __DATA 50.0M 487 __FONT_DATA 4K 2 __GLSLBUILTINS 5176K 2 __LINKEDIT 233.7M 121 __TEXT 446.2M 470 __UNICODE 564K 2 mapped file 90.4M 53 shared memory 2812K 21 =========== ======= ======= TOTAL 15.5G 1940 TOTAL, minus reserved VM space 15.4G 1940 Log: Startup Messages --- note | available bundle cache has not been initialized yet UCSF ChimeraX version: 0.8 (2018-11-11) How to cite UCSF ChimeraX OpenGL version: 4.1 INTEL-12.2.17 OpenGL renderer: Intel Iris Pro OpenGL Engine OpenGL vendor: Intel Inc. }}} " defect closed normal Graphics nonchimerax all ChimeraX