id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 1231 Slow rotation after presets used goddard@… Tom Goddard "{{{ The following bug report has been submitted: Platform: Darwin-17.7.0-x86_64-i386-64bit ChimeraX Version: 0.7 (2018-08-02) Description Rotating 5cd4 is very slow (a few frames per second) after using Preset / Cartoon followed by Preset / Original Look. The number of triangles per sphere ends up at 2000 but should be much smaller. This did not happen with 6caj which does not have nucleotides. Greg says nucleotides does some explicit level of detail call that is perhaps related to the failure of level of detail to adjust properly. Log: UCSF ChimeraX version: 0.7 (2018-08-02) OpenGL version: 4.1 NVIDIA-10.32.0 355.11.10.10.40.102 OpenGL renderer: NVIDIA GeForce GTX 680MX OpenGL Engine OpenGL vendor: NVIDIA Corporation How to cite UCSF ChimeraX open 5cd4 Summary of feedback from opening 5cd4 fetched from pdb --- notes | Used PDBx fixed column width tables to speed up reading mmCIF file Used PDBx keywords to speed up reading mmCIF file Chain information for 5cd4 #1 --- Chain | Description A M | CRISPR system Cascade subunit CasE B C D E F G N O P Q R S | CRISPR system Cascade subunit CasC H T | CRISPR system Cascade subunit CasD I U | CRISPR system Cascade subunit CasA J K V W | CRISPR system Cascade subunit CasB L X | crRNA 5cd4 mmCIF Assemblies | 1| author_and_software_defined_assembly | 2| author_and_software_defined_assembly 5cd4 citation: van Erp, P.B., Jackson, R.N., Carter, J., Golden, S.M., Bailey, S., Wiedenheft, B. (2015). Mechanism of CRISPR-RNA guided recognition of DNA targets in Escherichia coli. Nucleic Acids Res., 43, 8381-8391. PMID: 26243775. DOI: 10.1093/nar/gkv793 Opened mmCIF data containing 53308 atoms and 54550 bonds graphics Atom triangles 2000, bond triangles 160, ribbon divisions 20, max framerate 60 toolshed show ""Bug Reporter"" OpenGL version: 4.1 NVIDIA-10.32.0 355.11.10.10.40.102 OpenGL renderer: NVIDIA GeForce GTX 680MX OpenGL Engine OpenGL vendor: NVIDIA Corporation }}} " defect closed normal Graphics fixed all ChimeraX