id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
1126	Functionality 'nucleotides' not working	arosa@…	Greg Couch	"{{{
Hi everybody,

I’m not able to represent the side chains of an RNA  molecule as a ladder with the command ’nucleotides’. I’ve tried it in ChimeraX 0.6 and ChimeraX 0.7 daily and it is simply not represented.

In the image below I’m testing the command on a 5S ribosomal RNA and I got the error of an empty Array. Sometimes I don’t get any error, the command seems to be recognized (in the log) but nothing changes on the molecule itself.

I also tried to show all atoms, hide atoms, hide ribbon, delete hbonds, look for hbonds again, specify the model (#1) only, specificy the hydrogen bonds (#1.1) but nothing seems to work. Am I doing something wrong?

Thank you for your consideration.

André Rosa

[cid:image002.png@01D3ED19.13D3A880]


}}}

[[Image(CB1900E4FF5B4986A3EBB73562E9E096.png)]]
"	defect	closed	normal		Depiction		duplicate						all	ChimeraX