id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
10456	chimerX rpm install generates fips errors	bennion1@…	Greg Couch	"{{{
Hello,
I am attempting to use the redhat 8 rpm for installation on a rhel 7.9 system and am seeing this error during installation and when attempting to start chimeraX from /usr/bin/chimeraX.

Should I just compile from source?
thank you
Brian Bennion


bennion1@emer ~/Downloads]$ sudo dnf install ucsf-chimerax-1.7-1.el8.x86_64.rpm
[sudo] password for bennion1:
Updating Subscription Management repositories.
Base                                                                                     33 kB/s | 2.3 kB     00:00
Base                                                                                     27 kB/s | 1.9 kB     00:00
Base (free)                                                                              36 kB/s | 2.3 kB     00:00
Updates                                                                                  35 kB/s | 2.3 kB     00:00
Updates (free)                                                                           32 kB/s | 2.3 kB     00:00
RPMs                                                                                     28 kB/s | 2.0 kB     00:00
Dependencies resolved.
========================================================================================================================
 Package                        Architecture            Version                     Repository                     Size
========================================================================================================================
Installing:
 ucsf-chimerax                  x86_64                  1.7-1.el8                   @commandline                  408 M

Transaction Summary
========================================================================================================================
Install  1 Package

Total size: 408 M
Installed size: 1.6 G
Is this ok [y/N]: y
Downloading Packages:
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Preparing        :                                                                                                1/1
  Installing       : ucsf-chimerax-1.7-1.el8.x86_64                                                                 1/1
  Running scriptlet: ucsf-chimerax-1.7-1.el8.x86_64                                                                 1/1
Install desktop menu and associated mime types
crypto/fips/fips.c:154: OpenSSL internal error: FATAL FIPS SELFTEST FAILURE
Fatal Python error: Aborted

Current thread 0x00007feb0a7cc740 (most recent call first):
  File ""<frozen importlib._bootstrap>"", line 241 in _call_with_frames_removed
  File ""<frozen importlib._bootstrap_external>"", line 1233 in create_module
  File ""<frozen importlib._bootstrap>"", line 573 in module_from_spec
  File ""<frozen importlib._bootstrap>"", line 676 in _load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1149 in _find_and_load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1178 in _find_and_load
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/ssl.py"", line 100 in <module>
  File ""<frozen importlib._bootstrap>"", line 241 in _call_with_frames_removed
  File ""<frozen importlib._bootstrap_external>"", line 940 in exec_module
  File ""<frozen importlib._bootstrap>"", line 690 in _load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1149 in _find_and_load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1178 in _find_and_load
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/site-packages/chimerax/core/utils.py"", line 87 in initialize_ssl_cert_dir
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 445 in init
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 1069 in <module>
  File ""<frozen runpy>"", line 88 in _run_code
  File ""<frozen runpy>"", line 198 in _run_module_as_main
/var/tmp/rpm-tmp.lhwyDq: line 3: 3350138 Aborted                 $RPM_INSTALL_PREFIX/bin/chimerax --exit --nogui --silent --cmd 'linux xdg-install system true'
Precompiling Python packages
crypto/fips/fips.c:154: OpenSSL internal error: FATAL FIPS SELFTEST FAILURE
Fatal Python error: Aborted

Current thread 0x00007fe2575ed740 (most recent call first):
  File ""<frozen importlib._bootstrap>"", line 241 in _call_with_frames_removed
  File ""<frozen importlib._bootstrap_external>"", line 1233 in create_module
  File ""<frozen importlib._bootstrap>"", line 573 in module_from_spec
  File ""<frozen importlib._bootstrap>"", line 676 in _load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1149 in _find_and_load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1178 in _find_and_load
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/ssl.py"", line 100 in <module>
  File ""<frozen importlib._bootstrap>"", line 241 in _call_with_frames_removed
  File ""<frozen importlib._bootstrap_external>"", line 940 in exec_module
  File ""<frozen importlib._bootstrap>"", line 690 in _load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1149 in _find_and_load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1178 in _find_and_load
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/site-packages/chimerax/core/utils.py"", line 87 in initialize_ssl_cert_dir
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 445 in init
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 1069 in <module>
  File ""<frozen runpy>"", line 88 in _run_code
  File ""<frozen runpy>"", line 198 in _run_module_as_main
/var/tmp/rpm-tmp.lhwyDq: line 5: 3350142 Aborted                 $RPM_INSTALL_PREFIX/bin/chimerax -m compileall $RPM_INSTALL_PREFIX/libexec/UCSF-ChimeraX

  Verifying        : ucsf-chimerax-1.7-1.el8.x86_64                                                                 1/1
Installed products updated.

Installed:
  ucsf-chimerax-1.7-1.el8.x86_64

Complete!
[bennion1@emer ~/Downloads]$ which chimera
chimera: Command not found.
[bennion1@emer ~/Downloads]$ which chimeraS
chimeraS: Command not found.
[bennion1@emer ~/Downloads]$ which chimeraX
chimeraX: Command not found.
[bennion1@emer ~/Downloads]$ /usr/bin/chimerax
crypto/fips/fips.c:154: OpenSSL internal error: FATAL FIPS SELFTEST FAILURE
Fatal Python error: Aborted

Current thread 0x00007fe44c894740 (most recent call first):
  File ""<frozen importlib._bootstrap>"", line 241 in _call_with_frames_removed
  File ""<frozen importlib._bootstrap_external>"", line 1233 in create_module
  File ""<frozen importlib._bootstrap>"", line 573 in module_from_spec
  File ""<frozen importlib._bootstrap>"", line 676 in _load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1149 in _find_and_load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1178 in _find_and_load
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/ssl.py"", line 100 in <module>
  File ""<frozen importlib._bootstrap>"", line 241 in _call_with_frames_removed
  File ""<frozen importlib._bootstrap_external>"", line 940 in exec_module
  File ""<frozen importlib._bootstrap>"", line 690 in _load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1149 in _find_and_load_unlocked
  File ""<frozen importlib._bootstrap>"", line 1178 in _find_and_load
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/site-packages/chimerax/core/utils.py"", line 87 in initialize_ssl_cert_dir
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 445 in init
  File ""/usr/libexec/UCSF-ChimeraX/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 1069 in <module>
  File ""<frozen runpy>"", line 88 in _run_code
  File ""<frozen runpy>"", line 198 in _run_module_as_main
Abort (core dumped)



[cid:45b5f33c-fb95-4359-ad27-d69fa89363f4][cid:aad0eae4-6b6f-4bd8-b931-067cf6fc8730][cid:1236a32a-2842-4f0b-ade5-3c2107456bb7]Biosciences and Biotechnology Division|PLS|Lawrence Livermore National Laboratory|925-422-5722

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"	defect	closed	normal		Platform		not a bug		Tom Goddard				all	ChimeraX