id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 10348 Crash emitting color_pause signal chimerax-bug-report@… Tom Goddard "{{{ The following bug report has been submitted: Platform: macOS-10.16-x86_64-i386-64bit ChimeraX Version: 1.4 (2022-06-03 23:39:42 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. 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the University of California. All rights reserved. How to cite UCSF ChimeraX > open /Users/gyungheejo/Downloads/emd_29288.map Opened emd_29288.map as #1, grid size 340,340,340, pixel 1.08, shown at level 0.136, step 2, values float32 > set bgColor white > lighting full > lighting soft > preset ""overall look"" ""publication 1 (silhouettes)"" Using preset: Overall Look / Publication 1 (Silhouettes) Preset expands to these ChimeraX commands: set bg white graphics silhouettes t lighting depthCue f > volume #1 level 0.3543 > volume #1 step 1 > volume #1 level 0.6793 > volume #1 level 0.4471 > volume #1 level 0.3914 > open ""/Users/gyungheejo/Desktop/HIV nanoparticles/gp41-free > Env/38G-dn5_VRC01_PGT145_model_building/cryosparc_P383_J375_004_volume_map_sharp.mrc"" Opened cryosparc_P383_J375_004_volume_map_sharp.mrc as #2, grid size 360,360,360, pixel 0.725, shown at level 0.042, step 2, values float32 > open ""/Users/gyungheejo/Desktop/HIV nanoparticles/gp41-free > Env/38G-dn5_VRC01_PGT145_model_building/38G-dn5_VRC01_PGT145_model- > coot-0-1.pdb"" Chain information for 38G-dn5_VRC01_PGT145_model-coot-0-1.pdb #3 --- Chain | Description A B C | No description available D F G | No description available E H I | No description available J | No description available N | No description available > style stick Changed 19532 atom styles > hide atoms > show cartoons > select add #3 19532 atoms, 20027 bonds, 15 pseudobonds, 2431 residues, 2 models selected > select add #2 19532 atoms, 20027 bonds, 15 pseudobonds, 2431 residues, 4 models selected > ui mousemode right ""translate selected models"" > view matrix models > #2,1,0,0,29.297,0,1,0,-66.735,0,0,1,77.656,#3,1,0,0,29.297,0,1,0,-66.735,0,0,1,77.656 > ui mousemode right ""rotate selected models"" > view matrix models > #2,-0.71824,-0.68856,0.10014,330.29,0.667,-0.72232,-0.18268,72.226,0.19812,-0.06442,0.97806,61.44,#3,-0.71824,-0.68856,0.10014,330.29,0.667,-0.72232,-0.18268,72.226,0.19812,-0.06442,0.97806,61.44 > view matrix models > #2,-0.86827,0.48718,0.093568,209.66,-0.49139,-0.87051,-0.027405,227.09,0.068101,-0.069773,0.99524,77.494,#3,-0.86827,0.48718,0.093568,209.66,-0.49139,-0.87051,-0.027405,227.09,0.068101,-0.069773,0.99524,77.494 > view matrix models > #2,-0.80574,0.56733,0.17008,182.9,-0.57806,-0.81581,-0.017227,230.92,0.12898,-0.11219,0.98528,75.601,#3,-0.80574,0.56733,0.17008,182.9,-0.57806,-0.81581,-0.017227,230.92,0.12898,-0.11219,0.98528,75.601 > ui mousemode right ""translate selected models"" > view matrix models > #2,-0.80574,0.56733,0.17008,219.77,-0.57806,-0.81581,-0.017227,354.22,0.12898,-0.11219,0.98528,70.411,#3,-0.80574,0.56733,0.17008,219.77,-0.57806,-0.81581,-0.017227,354.22,0.12898,-0.11219,0.98528,70.411 > ui mousemode right ""rotate selected models"" > view matrix models > #2,-0.81797,0.57473,-0.024518,242.79,-0.57441,-0.81373,0.088867,341.34,0.031123,0.086774,0.99574,58.356,#3,-0.81797,0.57473,-0.024518,242.79,-0.57441,-0.81373,0.088867,341.34,0.031123,0.086774,0.99574,58.356 > ui mousemode right ""translate selected models"" > view matrix models > #2,-0.81797,0.57473,-0.024518,212.57,-0.57441,-0.81373,0.088867,353.4,0.031123,0.086774,0.99574,62.299,#3,-0.81797,0.57473,-0.024518,212.57,-0.57441,-0.81373,0.088867,353.4,0.031123,0.086774,0.99574,62.299 > view matrix models > #2,-0.81797,0.57473,-0.024518,217.49,-0.57441,-0.81373,0.088867,356.46,0.031123,0.086774,0.99574,60.422,#3,-0.81797,0.57473,-0.024518,217.49,-0.57441,-0.81373,0.088867,356.46,0.031123,0.086774,0.99574,60.422 > view matrix models > #2,-0.81797,0.57473,-0.024518,217.85,-0.57441,-0.81373,0.088867,354.9,0.031123,0.086774,0.99574,59.68,#3,-0.81797,0.57473,-0.024518,217.85,-0.57441,-0.81373,0.088867,354.9,0.031123,0.086774,0.99574,59.68 > view matrix models > #2,-0.81797,0.57473,-0.024518,217.88,-0.57441,-0.81373,0.088867,359.24,0.031123,0.086774,0.99574,59.344,#3,-0.81797,0.57473,-0.024518,217.88,-0.57441,-0.81373,0.088867,359.24,0.031123,0.086774,0.99574,59.344 > ui mousemode right ""rotate selected models"" > view matrix models > #2,-0.74184,0.67006,-0.026283,196.44,-0.66911,-0.73706,0.095028,361.97,0.044302,0.088082,0.99513,57.496,#3,-0.74184,0.67006,-0.026283,196.44,-0.66911,-0.73706,0.095028,361.97,0.044302,0.088082,0.99513,57.496 > ui mousemode right ""translate selected models"" > view matrix models > #2,-0.74184,0.67006,-0.026283,197.72,-0.66911,-0.73706,0.095028,360.04,0.044302,0.088082,0.99513,57.582,#3,-0.74184,0.67006,-0.026283,197.72,-0.66911,-0.73706,0.095028,360.04,0.044302,0.088082,0.99513,57.582 > ui tool show ""Fit in Map"" > fitmap #2 inMap #1 Fit map cryosparc_P383_J375_004_volume_map_sharp.mrc in map emd_29288.map using 58286 points correlation = 0.4844, correlation about mean = 0.07395, overlap = 875.4 steps = 88, shift = 3.06, angle = 4.68 degrees Position of cryosparc_P383_J375_004_volume_map_sharp.mrc (#2) relative to emd_29288.map (#1) coordinates: Matrix rotation and translation -0.75480538 0.65385965 0.05231059 191.93418708 -0.64889717 -0.75597487 0.08622336 362.51896301 0.09592347 0.03113766 0.99490157 55.80431271 Axis -0.04222259 -0.03342879 -0.99854883 Axis point 161.67393247 145.25858697 0.00000000 Rotation angle (degrees) 139.28286957 Shift along axis -75.94586023 > fitmap #3 inMap #2 Fit molecule 38G-dn5_VRC01_PGT145_model-coot-0-1.pdb (#3) to map cryosparc_P383_J375_004_volume_map_sharp.mrc (#2) using 19532 atoms average map value = 0.06954, steps = 76 shifted from previous position = 3.12 rotated from previous position = 4.67 degrees atoms outside contour = 5924, contour level = 0.041973 Position of 38G-dn5_VRC01_PGT145_model-coot-0-1.pdb (#3) relative to cryosparc_P383_J375_004_volume_map_sharp.mrc (#2) coordinates: Matrix rotation and translation 0.99999908 -0.00135638 -0.00005054 0.18486232 0.00135638 0.99999908 -0.00001292 -0.19293427 0.00005055 0.00001285 1.00000000 0.03504937 Axis 0.00949144 -0.03723800 0.99926135 Axis point 141.12764839 135.88777824 0.00000000 Rotation angle (degrees) 0.07777213 Shift along axis 0.04396258 > select subtract #3 2 models selected > select add #3 19532 atoms, 20027 bonds, 15 pseudobonds, 2431 residues, 4 models selected > select subtract #2 19532 atoms, 20027 bonds, 15 pseudobonds, 2431 residues, 2 models selected > select subtract #3 Nothing selected > hide #!3 models > ui mousemode right zoom > select add #2 2 models selected > ui mousemode right ""rotate selected models"" > view matrix models > #2,-0.92684,0.3753,0.010926,253.17,-0.37387,-0.9252,0.065013,348.55,0.034508,0.056172,0.99782,60.666 > ui mousemode right ""translate selected models"" > view matrix models > #2,-0.92684,0.3753,0.010926,254.86,-0.37387,-0.9252,0.065013,346.74,0.034508,0.056172,0.99782,61.089 > ui tool show ""Fit in Map"" > fitmap #2 inMap #1 Fit map cryosparc_P383_J375_004_volume_map_sharp.mrc in map emd_29288.map using 58286 points correlation = 0.6501, correlation about mean = 0.3589, overlap = 1628 steps = 80, shift = 0.854, angle = 5.02 degrees Position of cryosparc_P383_J375_004_volume_map_sharp.mrc (#2) relative to emd_29288.map (#1) coordinates: Matrix rotation and translation -0.91777319 0.39632317 0.02490618 249.73582404 -0.39679330 -0.91773184 -0.01798187 358.27689390 0.01573057 -0.02638589 0.99952806 74.87375333 Axis -0.01059489 0.01156764 -0.99987696 Axis point 161.60628792 153.82821933 0.00000000 Rotation angle (degrees) 156.63376174 Shift along axis -73.36604503 > select subtract #2 Nothing selected > show #!3 models > hide #!1 models > fitmap #3 inMap #2 Fit molecule 38G-dn5_VRC01_PGT145_model-coot-0-1.pdb (#3) to map cryosparc_P383_J375_004_volume_map_sharp.mrc (#2) using 19532 atoms average map value = 0.06955, steps = 180 shifted from previous position = 4.38 rotated from previous position = 18.4 degrees atoms outside contour = 5926, contour level = 0.041973 Position of 38G-dn5_VRC01_PGT145_model-coot-0-1.pdb (#3) relative to cryosparc_P383_J375_004_volume_map_sharp.mrc (#2) coordinates: Matrix rotation and translation 0.99999939 -0.00110263 -0.00008114 0.15545980 0.00110263 0.99999939 0.00000998 -0.16212437 0.00008113 -0.00001007 1.00000000 0.02010091 Axis -0.00906331 -0.07337904 0.99726294 Axis point 145.07979836 141.16036299 0.00000000 Rotation angle (degrees) 0.06334956 Shift along axis 0.03053344 > hide #!3 models > show #!3 models > color #2 #ffffb287 models > color #2 #929292 models transparency 0 > color #2 #929292c2 models > color #2 #929292a4 models > color #2 silver models transparency 0 > color #2 #c0c0c0ab models > ui mousemode right ""translate selected models"" > ui mousemode right zoom > ui tool show ""Side View"" > volume #2 step 1 > volume #2 level 0.03549 > show #!1 models > hide #!2 models > color #1 #b2b2b2a7 models > color #1 #b2b2b2a8 models > hide #!3 models > show #!3 models > show #!2 models > hide #!3 models > hide #!2 models > open /Users/gyungheejo/Downloads/8flw.pdb 8flw.pdb title: Cryo-em structure of PGT145 DU303 fab In complex with BG505 Ds- sosip.664 [more info...] Chain information for 8flw.pdb #4 --- Chain | Description | UniProt A B F | ENV polyprotein | Q2N0S6_9HIV1 C G I | ENV polyprotein | Q2N0S6_9HIV1 H | PGT145 DU303 heavy | L | PGT145 DU303 light | Non-standard residues in 8flw.pdb #4 --- BMA — β-D-mannopyranose (β-D-mannose; D-mannose; mannose) MAN — α-D-mannopyranose (α-D-mannose; D-mannose; mannose) NAG — 2-acetamido-2-deoxy-β-D-glucopyranose (N-acetyl-β-D-glucosamine; 2-acetamido-2-deoxy-β-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-acetyl-D-glucosamine) TYS — O-sulfo-L-tyrosine > hide #!1 models > select add #4 16868 atoms, 17327 bonds, 9 pseudobonds, 2073 residues, 2 models selected > style sel stick Changed 16868 atom styles > hide sel atoms > show sel cartoons > show #!1 models > select subtract #4 Nothing selected > show #!4 atoms > show #!4 cartoons > hide #!4 atoms > show #!2 models > hide #!1 models > show #!1 models > show #!3 models > hide #!2 models > hide #!1 models > hide #!4 models > show #!4 models > hide #!4 models > show #!4 models > hide #!3 models > show #!1 models > show #!4 atoms > show #!2 models > hide #!1 models > color #2 #ffd479 models transparency 0 > color #2 #ffd479bf models > color #2 #008f00 models transparency 0 > color #2 #009051 models transparency 0 > color #2 #0090517c models > color #2 #ff2600 models transparency 0 > color #2 #ffd479 models transparency 0 > color #2 #ffd4799d models > show #!1 models ===== Log before crash end ===== Log: UCSF ChimeraX version: 1.4 (2022-06-03) © 2016-2022 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 Metal - 83.1 OpenGL renderer: Apple M1 Pro OpenGL vendor: Apple Python: 3.9.11 Locale: UTF-8 Qt version: PyQt6 6.3.0, Qt 6.3.0 Qt runtime version: 6.3.0 Qt platform: cocoa Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro18,3 Model Number: MKGQ3KH/A Chip: Unknown Total Number of Cores: 10 (8 performance and 2 efficiency) Memory: 16 GB System Firmware Version: 8422.141.2 OS Loader Version: 8422.141.2 Software: System Software Overview: System Version: macOS 13.5.1 (22G90) Kernel Version: Darwin 22.6.0 Time since boot: 19일 23시간 Graphics/Displays: Apple M1 Pro: Chipset Model: Apple M1 Pro Type: GPU Bus: Built-In Total Number of Cores: 16 Vendor: Apple (0x106b) Metal Support: Metal 3 Displays: Color LCD: Display Type: Built-in Liquid Retina XDR Display Resolution: 3024 x 1964 Retina Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: No Connection Type: Internal LG Ultra HD: Resolution: 5120 x 2880 (5K/UHD+ - Ultra High Definition Plus) UI Looks like: 2560 x 1440 @ 60.00Hz Mirror: Off Online: Yes Installed Packages: alabaster: 0.7.12 appdirs: 1.4.4 appnope: 0.1.3 Babel: 2.10.1 backcall: 0.2.0 blockdiag: 3.0.0 certifi: 2021.10.8 cftime: 1.6.0 charset-normalizer: 2.0.12 ChimeraX-AddCharge: 1.2.3 ChimeraX-AddH: 2.1.11 ChimeraX-AlignmentAlgorithms: 2.0 ChimeraX-AlignmentHdrs: 3.2.1 ChimeraX-AlignmentMatrices: 2.0 ChimeraX-Alignments: 2.4.3 ChimeraX-AlphaFold: 1.0 ChimeraX-AltlocExplorer: 1.0.2 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.0 ChimeraX-Atomic: 1.39.1 ChimeraX-AtomicLibrary: 7.0 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.1 ChimeraX-BasicActions: 1.1 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.1.1 ChimeraX-BondRot: 2.0 ChimeraX-BugReporter: 1.0 ChimeraX-BuildStructure: 2.7 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.1 ChimeraX-ButtonPanel: 1.0 ChimeraX-CageBuilder: 1.0 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.2 ChimeraX-ChemGroup: 2.0 ChimeraX-Clashes: 2.2.4 ChimeraX-ColorActions: 1.0 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.1 ChimeraX-CommandLine: 1.2.3 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0 ChimeraX-Core: 1.4 ChimeraX-CoreFormats: 1.1 ChimeraX-coulombic: 1.3.2 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0 ChimeraX-DataFormats: 1.2.2 ChimeraX-Dicom: 1.1 ChimeraX-DistMonitor: 1.1.5 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ExperimentalCommands: 1.0 ChimeraX-FileHistory: 1.0 ChimeraX-FunctionKey: 1.0 ChimeraX-Geometry: 1.2 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1 ChimeraX-Hbonds: 2.1.2 ChimeraX-Help: 1.2 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0 ChimeraX-Label: 1.1.1 ChimeraX-ListInfo: 1.1.1 ChimeraX-Log: 1.1.5 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.8.1 ChimeraX-Map: 1.1 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0 ChimeraX-MapFilter: 2.0 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1 ChimeraX-Markers: 1.0 ChimeraX-Mask: 1.0 ChimeraX-MatchMaker: 2.0.6 ChimeraX-MDcrds: 2.6 ChimeraX-MedicalToolbar: 1.0.1 ChimeraX-Meeting: 1.0 ChimeraX-MLP: 1.1 ChimeraX-mmCIF: 2.7 ChimeraX-MMTF: 2.1 ChimeraX-Modeller: 1.5.5 ChimeraX-ModelPanel: 1.3.2 ChimeraX-ModelSeries: 1.0 ChimeraX-Mol2: 2.0 ChimeraX-Morph: 1.0 ChimeraX-MouseModes: 1.1 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nucleotides: 2.0.2 ChimeraX-OpenCommand: 1.9 ChimeraX-PDB: 2.6.6 ChimeraX-PDBBio: 1.0 ChimeraX-PDBLibrary: 1.0.2 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1 ChimeraX-PubChem: 2.1 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-ResidueFit: 1.0 ChimeraX-RestServer: 1.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 2.0.1 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.6 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0 ChimeraX-Shortcuts: 1.1 ChimeraX-ShowAttr: 1.0 ChimeraX-ShowSequences: 1.0 ChimeraX-SideView: 1.0 ChimeraX-Smiles: 2.1 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.8 ChimeraX-STL: 1.0 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.0.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0 ChimeraX-SwapAA: 2.0 ChimeraX-SwapRes: 2.1.1 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.1.1 ChimeraX-ToolshedUtils: 1.2.1 ChimeraX-Tug: 1.0 ChimeraX-UI: 1.18.3 ChimeraX-uniprot: 2.2 ChimeraX-UnitCell: 1.0 ChimeraX-ViewDockX: 1.1.2 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0 ChimeraX-WebServices: 1.1.0 ChimeraX-Zone: 1.0 colorama: 0.4.4 cxservices: 1.2 cycler: 0.11.0 Cython: 0.29.26 debugpy: 1.6.0 decorator: 5.1.1 docutils: 0.17.1 entrypoints: 0.4 filelock: 3.4.2 fonttools: 4.33.3 funcparserlib: 1.0.0 grako: 3.16.5 h5py: 3.7.0 html2text: 2020.1.16 idna: 3.3 ihm: 0.27 imagecodecs: 2021.11.20 imagesize: 1.3.0 ipykernel: 6.6.1 ipython: 7.31.1 ipython-genutils: 0.2.0 jedi: 0.18.1 Jinja2: 3.0.3 jupyter-client: 7.1.0 jupyter-core: 4.10.0 kiwisolver: 1.4.2 line-profiler: 3.4.0 lxml: 4.7.1 lz4: 3.1.10 MarkupSafe: 2.1.1 matplotlib: 3.5.1 matplotlib-inline: 0.1.3 msgpack: 1.0.3 nest-asyncio: 1.5.5 netCDF4: 1.5.8 networkx: 2.6.3 numexpr: 2.8.1 numpy: 1.22.1 openvr: 1.16.802 packaging: 21.0 ParmEd: 3.4.3 parso: 0.8.3 pexpect: 4.8.0 pickleshare: 0.7.5 Pillow: 9.0.1 pip: 21.3.1 pkginfo: 1.8.2 prompt-toolkit: 3.0.29 psutil: 5.9.0 ptyprocess: 0.7.0 pycollada: 0.7.2 pydicom: 2.2.2 Pygments: 2.11.2 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 3.0.9 PyQt6-commercial: 6.3.0 PyQt6-Qt6: 6.3.0 PyQt6-sip: 13.3.1 PyQt6-WebEngine-commercial: 6.3.0 PyQt6-WebEngine-Qt6: 6.3.0 python-dateutil: 2.8.2 pytz: 2022.1 pyzmq: 23.1.0 qtconsole: 5.3.0 QtPy: 2.1.0 RandomWords: 0.3.0 requests: 2.27.1 scipy: 1.7.3 setuptools: 59.8.0 sfftk-rw: 0.7.2 six: 1.16.0 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 Sphinx: 4.3.2 sphinx-autodoc-typehints: 1.15.2 sphinxcontrib-applehelp: 1.0.2 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 2.0.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.5 suds-community: 1.0.0 tables: 3.7.0 tifffile: 2021.11.2 tinyarray: 1.2.4 tornado: 6.1 traitlets: 5.1.1 urllib3: 1.26.9 wcwidth: 0.2.5 webcolors: 1.11.1 wheel: 0.37.1 wheel-filename: 1.3.0 }}} " defect closed normal General Controls duplicate all ChimeraX