[Chimera-users] Structure to sequence alignment

Kamil Steczkiewicz kamil.steczkiewicz at gmail.com
Fri May 28 00:44:17 PDT 2021

Dear Chimera community,

Does Chimera allow to display multiple protein structures as CA trace,
colour corresponding residues in 3d, display these proteins' sequences in
alignment window and allow to manually alter the alignment to manually
align residues coloured as mutually corresponding (preferably by mouse)?
Something like was possible in good old and unfortunately not supported any
more Insight program... That's what wraps up to so-called structure-based
manual multiple sequence alignment. Essential if you're assessing some
highly diversified set of structures and want to have a precise alignment
for them.


*Kamil Steczkiewicz, PhD*
Department of Bioinformatics
Institute of Biochemistry and Biophysics
Polish Academy of Sciences
tel. +48 22 592 *5759 *| +48 668 13 02 13
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20210528/ad30ffca/attachment.html>

More information about the Chimera-users mailing list